Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0641 ATGATTGATGCTATCAAGGCTGCGATCGGCGATGCCGTTCTCACTTCCATGTGGATTTTCTGTGCTTCGTCTCTTGGGGTTCTCACCTCCGTTCTGTACTCTGCCGCTGTCGCTTATGGCCTTCCGTTTCATCCGCTTCTCATCACTACTACTCTTGTCTTCGTTCTTGTTTTCGTTTTTAATATTATCGGCGCTGCTTTGGGTGGGGCTAGCTTTAATCCCACTGCCACTGCCGCTTTCTATGCTGCCGGCGTTGGTCCGACCTCTCTCTTCTCCATGGCTCTCCGTTTCCCTGCTCAGGCAGCTGGTGCGGTTGCTGGTGCCCTGGCTATCAAGGAGGTGATGCCTATTCAATACAAGCACATGCTCGGTGGACCTTCTCTAAAAGTTGACATTCATACTGGAGCCACAGCTGAAGGAGTTTTGACCTTTGTCATCAGTTTTGCTGTTCTTCTAATTGTTCTCAGGGGCCCCTCCAGCCCAGTAATTAAGACATGGTTGATGGCGATGGCCACTGTAGCACTAATTGTTGCCGGTTCTAGTTACACTGGACCTTCCATGAATCCTGCAAATGCGTTTGGGTGGGCATATATGAACAATAGACACGATACGTGGGAGCAGTTGTACGTGTACTGGATCGCCCCCTTCATTGGAGCCATATTGGCTGCTTGGCTTTTCAGAATCATCTTCCCACCACCAGCCCCAGCCCCAGCCAAGCAGAAGAAAGCTTGA 732 50.55 MIDAIKAAIGDAVLTSMWIFCASSLGVLTSVLYSAAVAYGLPFHPLLITTTLVFVLVFVFNIIGAALGGASFNPTATAAFYAAGVGPTSLFSMALRFPAQAAGAVAGALAIKEVMPIQYKHMLGGPSLKVDIHTGATAEGVLTFVISFAVLLIVLRGPSSPVIKTWLMAMATVALIVAGSSYTGPSMNPANAFGWAYMNNRHDTWEQLYVYWIAPFIGAILAAWLFRIIFPPPAPAPAKQKKA 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 61657830 61663107 + Tan0009065.1 Tan03g0641 746145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0641 243 Pfam Major intrinsic protein 3 226 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan03g0641 243 SUPERFAMILY Aquaporin-like 4 239 IPR023271 -
Tan03g0641 243 Gene3D Glycerol uptake facilitator protein. 2 238 IPR023271 -
Tan03g0641 243 PRINTS Major intrinsic protein family signature 138 156 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan03g0641 243 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan03g0641 243 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan03g0641 243 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan03g0641 243 PRINTS Major intrinsic protein family signature 53 77 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan03g0641 243 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan03g0641 243 PANTHER AQUAPORIN SIP1-1 1 242 IPR044222 GO:0015250(InterPro)
Tan03g0641 243 FunFam Aquaporin SIP1-1 2 242 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0641 Tan-Chr3:61657830 Tan03g1061 Tan-Chr3:66855131 1.50E-12 dispersed
Tan03g0641 Tan-Chr3:61657830 Tan05g0256 Tan-Chr5:1952043 6.50E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0641 K09875 - csv:101220534 414.846