Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0654 ATGGCTGCCTACGCTTTGCTTGGCGACTCCACCGCCCGCGTCAATGGCGGTTTCGGTGACAGTACTCTGACCAGCGCCTCGACTAACAGCAACGGCAGCGACGAACTTAATCAGCATAATCAACAGATTGTTCAAGTTCAGGTTCAGGTTTCTCAGCCGCCGCCGCGACTACCGGCTGCCAAAATGGTGCGGAAGAGAATCGCGTCAGAGATGGAGATCGAAGGACTCGACGGCGGCGGCGGTACCGCCGCCGTCCATCCGCGGTTTTGCCGGCGGAGTTTGGCCTCCGATCGTCCTTTTACAGAGGGAGAAAATAAGGTGAATGCGAATGCGAATAATTATTGTTCTTCTTCAAACCCTAGCCATGGCGCTAACCACTCCACTGTGCATAATTTAACCGCTCTGACGTCAGTTGTAATCGAAGGGTCAAATTTATCAAATCCTCCGTCTGGTTCTGATGCTACGGCTTCTTCCACTACCTCCAACAATAACAACTCGTCTCTTATCGATAGTACTCTTCCCGTTCTTCGTCCTCAGCCCCACCATCACCATTTGCAGAATCCTGCAGTCTGTGGTTTCTCTGGTTTGCCCTTGTTCCCACCAGAATCAAATCACCACCACCATCATAACAAGTTAAATACTCTCAATAATCCTTTTCCCCTTCCCAATCCATGTCAAGTTGTTCTTCATAATCCTCCCACTACTGCAACCACCTCCATTATCGCCGCCACTTCTTCTCCGATGGATGATTCCTCCGCCACGGCTTGGATCGATGGTATTATCAAGGATTTAATCCATAGCTCCACTGCCATATCCATTCCTCAGCTTATTCAGAACGTTCGTGATATTATTTATCCGTGTAACCCCAATCTTGCGAACCTTCTTGAGTTTCGTCTTCGTACTTTGACGGACCCTAACGTTCCTAACTTCGCCGCTGAGGATCATCGCGTTAGGAAATCGTCCTTGCCGTTGCCGGGGCCGGTGGCGGGGTTGGGGCTGCAGCAGAGGCAGTTCAATCAAGATCATGAACAAGAACAGGATTGTGCTGGGTTGAAGCTTAATCTCGATTCGTCTTCTCTGCATAATCTTCCTAATTTCCCCTCCCAGCCGCCGTTTCATGAGTCGTATCTCCACTGGGGAGCTACTCCCCCGCCGGTTCCCACTCCCTCCGCCGCCGCTATCGGCGGCGAGGTTCCCGGTCATCATCAACTAAATCTCTCTTCTGTCACACAGTCGTCGCTTGTTCCTCTAAACCATGTCCCTTCTAAGCCACAACCAGAACAGCAGAACTCCTGTCCGGTCAATGTGAAGGCAGCGGCGGCGGCGGTGGCACAGCCACCTCCCCCGCCGCCGACGACCAACAACCCTTCAACGACTGCGTTACTGATTAGAGAGATTAAAGAGGAGATGAGGCAACAGAAGAGAGACGAAGAAGGGTTACACCTCTTGACTTTGCTTCTTCAATGTGCAGAAGCCGTTTCTGCCGATAATTTAGAAGAAGCCAACAAGATGCTTTTGGAAATCTCCGAGTTATCGACACCGTTTGGCACATCGGCGCAAAGGGTAGCGGCGTATTTCTCAGAAGCAATGTCGGCGAGGCTTGTGAGCTCATGTTTAGGCATATACGCCGCTCTGCCGCCGGCGTTGGTGCCCCACACGCACAGCCAGAAGATAGCCTCAGCCTTTCAAGTCTTCAATGGCATAAGCCCATTTGTCAAATTCTCGCACTTCACAGCCAATCAAGCCATACAAGAAGCCTTCGAAAGGGAAGAGAGAGTTCACATTATAGATCTAGACATCATGCAAGGCCTTCAATGGCCTGGCCTCTTCCACATCTTGGCGTCTCGGCCGGGCGGGCCACCCTATGTCCGTCTCACAGGCCTGGGGACCTCTCAGGAAGTTCTTGATGCCACTGGCAAACGCCTCACTGAATTCGCCGAGAAGCTTGGCCTTCCCTTTGATTTCTTTCCTGTAGCAGATAAAATTGGAAATCTGGACTTGGAGAGGCTCAACGTGAGCAAAAGGGAAGCCGTTGCCGTCCATTGGATGCAGCATTCTCTTTATGAAGTCACTGGTTCTGATTCCAATACGCTATGGCTTTTGCAGAGATTGGCTCCAAAAGTGGTGACGGTCGTCGAACAAGACCTGAGCCACACAGGCTCCTTCTTGGGAAGATTCGTAGAGGCCATTCATTACTATTCAGCACTGTTCGACTCATTGGGTGTCAGCTACGGCGAAGAGAGTGAAGAGAGGCACTTAGTGGAGCAGCAACTGTTGTCAAGGGAGATCAGAAACGTGCTGGCCGTCGGCGGGCCGTCAAGGAGCGGCGAAGTGAAGTTCCAAAACTGGAGAGAAAAGCTGCAGCAATCTGGGTTTAAGGGCATTTCTCTCGCCGGAAATGCTGCAACTCAGGCCACTCTCCTCCTCGGAATGTTCCCTTCCGATGGGTATACGCTTGTAGAAGACAATGGGACTCTGAAACTTGGGTGGAAGGATCTTTGCTTGCTGACGGCGTCGGCTTGGAAGCCGCCGTTTCATCACCCTGCTGCTGCAGTAGCAGCGGCGGCCGCCAACAACCACATTCCCCGGTACTGA 2595 51.95 MAAYALLGDSTARVNGGFGDSTLTSASTNSNGSDELNQHNQQIVQVQVQVSQPPPRLPAAKMVRKRIASEMEIEGLDGGGGTAAVHPRFCRRSLASDRPFTEGENKVNANANNYCSSSNPSHGANHSTVHNLTALTSVVIEGSNLSNPPSGSDATASSTTSNNNNSSLIDSTLPVLRPQPHHHHLQNPAVCGFSGLPLFPPESNHHHHHNKLNTLNNPFPLPNPCQVVLHNPPTTATTSIIAATSSPMDDSSATAWIDGIIKDLIHSSTAISIPQLIQNVRDIIYPCNPNLANLLEFRLRTLTDPNVPNFAAEDHRVRKSSLPLPGPVAGLGLQQRQFNQDHEQEQDCAGLKLNLDSSSLHNLPNFPSQPPFHESYLHWGATPPPVPTPSAAAIGGEVPGHHQLNLSSVTQSSLVPLNHVPSKPQPEQQNSCPVNVKAAAAAVAQPPPPPPTTNNPSTTALLIREIKEEMRQQKRDEEGLHLLTLLLQCAEAVSADNLEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAALPPALVPHTHSQKIASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSQEVLDATGKRLTEFAEKLGLPFDFFPVADKIGNLDLERLNVSKREAVAVHWMQHSLYEVTGSDSNTLWLLQRLAPKVVTVVEQDLSHTGSFLGRFVEAIHYYSALFDSLGVSYGEESEERHLVEQQLLSREIRNVLAVGGPSRSGEVKFQNWREKLQQSGFKGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWKPPFHHPAAAVAAAAANNHIPRY 864
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 62042939 62046788 - Tan0001971.1 Tan03g0654 746158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0654 864 ProSiteProfiles GRAS family profile. 473 842 IPR005202 -
Tan03g0654 864 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 468 841 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0008356(PANTHER)|GO:0009630(PANTHER)|GO:0009956(PANTHER)|GO:0043565(PANTHER)|GO:0048366(PANTHER)|GO:0051457(PANTHER)|GO:0090610(PANTHER)
Tan03g0654 864 MobiDBLite consensus disorder prediction 142 173 - -
Tan03g0654 864 MobiDBLite consensus disorder prediction 15 35 - -
Tan03g0654 864 MobiDBLite consensus disorder prediction 142 187 - -
Tan03g0654 864 Pfam GRAS domain family 483 842 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0990 Tan-Chr1:9625374 Tan03g0654 Tan-Chr3:62042939 3.60E-132 dispersed
Tan03g0654 Tan-Chr3:62042939 Tan06g1157 Tan-Chr6:11736336 2.80E-93 dispersed
Tan03g0654 Tan-Chr3:62042939 Tan06g1914 Tan-Chr6:56379395 1.10E-31 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26914 PF03514 GRAS 3.50E-126 CL0063 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0654 K27742 - csv:101205286 1342.41