Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g0677 | ATGATTCTGGTTGGCCATCAGCAACAACTATTTACAATATACAGGGATACTCGTGTTACAGTTTTAGAACAGAGTCTTAGGAAATTAGGTGTTGAGCGGCTTAGCAAGGACGATGTCCAGAAAATGCAGAGGGAGGCTCTTGAAGCTAAGATTGGGAACTGGATACATTACATGCCCATCGCTGTTGAAACACTTTTTGGAACTAAAGCATGCATTGAAATGCGGGATTCTGCATTGAGCTTAACACAACGCCTTGCTGAGACAGCTCAAGAGACCTTTGTTGATTTTGAAGAAGTCGTGGAAAAAGATGCCACAAAAACTGTTGTTCTTGATGGGTCTGTTCATCCCTTGACTAGTTATGTGATAAACTACGTCAAGTTCTTATTTGAGTAA | 393 | 40.97 | MILVGHQQQLFTIYRDTRVTVLEQSLRKLGVERLSKDDVQKMQREALEAKIGNWIHYMPIAVETLFGTKACIEMRDSALSLTQRLAETAQETFVDFEEVVEKDATKTVVLDGSVHPLTSYVINYVKFLFE | 130 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 62297719 | 62299465 | - | Tan0006021.1 | Tan03g0677 | 746181 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g0677 | 130 | SUPERFAMILY | Cullin repeat-like | 1 | 130 | IPR016159 | - | |
Tan03g0677 | 130 | Gene3D | Exocyst complex component Exo70 | 1 | 65 | - | - | |
Tan03g0677 | 130 | Gene3D | Exocyst complex component Exo70 | 66 | 130 | - | - | |
Tan03g0677 | 130 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 62 | 130 | IPR004140 | GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro) | |
Tan03g0677 | 130 | Pfam | Exo70 exocyst complex subunit C-terminal | 61 | 130 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g0677 | Tan-Chr3:62297719 | Tan03g1260 | Tan-Chr3:68895106 | 1.10E-52 | dispersed | |
Tan03g0677 | Tan-Chr3:62297719 | Tan05g2961 | Tan-Chr5:81690153 | 2.20E-10 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g0677 | K07195 | - | csv:105436018 | 127.487 |