Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0690 ATGCCGACGAGGAGGGATCGTGTGTGCGTTTTTCTGCTGTCGTGTTGCTGCTCCTTGCTCCTTGCTGGTGCTGCAACCACAGACCCATCTGATGTTGAAGCATTGCTAGCATTAAAGAGGAGTCTAATTGACCCTATGGACCGTCTTAAAAACTGGAATGAGGGAGATCCTTGCACAACTAATTGGACTGGAGTAGTATGCAACTATTCCGATGGAGCTGTTGGGAACCTGCGTGTCAACGAACTCCAGCTATTGAATAAGAACCTATCTGGAAACTTAGCCCCTGAGATCGGCCAATTGTCCCAACTTAAGAAGTTAGATTTCATGTGGAATGACCTAACTGGTTCAATTCCGAAGGAGATCGGCAGTATTAGGTCGCTGAAACTCTTACTCTTAAATGGAAATAAACTATCTGGTCATCTTCCAGACGAGCTTGGTAATCTTACAAATCTCATCCGATTCCAAATAGATGAGAATCAAATTTCAGGGCCTATCCCAAAATCATATGCTAACTTGATCAGTGTGAAGCACCTCCACTTCAATAACAACACACTAAGTGGCGAAATTCCATCTGAGCTTTCCAAATTATCGAACCTTCTTCACATGCTTTTGGATAACAATAACTTGTCGGGTTCCCTGCCACCAGAATTTTCGACCTTGCCAAAACTACGCATTCTGCAACTTGATAACAACAACTTCGAAGGAGCAATTCCAGCATCTTATGATAATTTTTCTACGTTAGTGAAATTAAGTCTCAGGAATTGCAGCTTGGAGGGACCGATTCTTAATTTTAGCAAGATTGCAGACCTCAGTTACTTGGATCTTAGCTGGAATCATTTTACTGGACCCATACCACCATATAACCTCTCTTCTAAAATAACAACAATAATTTTATCACACAACCAGCTGAATGGATCTATACCCAGCAGTTTCTCAGATCTTCCTGTCCTCCAGAAACTGTCACTTGAGAATAACTTTCTAAATGGTTCTGTACCTTCTGCTCTATGGGAGAAAATGTCCTTCAATTCAAGTGCTCGACTTACACTCGATCTTCGGAACAATTTGTTTTCTAGCATTTCTGGAAGCACTAACCCTCCAGCTAATGTCACGCTAAGGCTTGAAGGAAATCCAATCTGCCAAAATTTAAGAGGACAAAACTCTAACCTGTTCTGTGCTTCTAAAATTGTAGAGGATGGGCTGCTTAGAAGCTCAAGGAACTTCAATGAAACATGTCCAGTTAGAGGTTGTCCAACAGATAGTTTTTTTGAATATGTGCCAGACTCTCCAGACCCATGCTTTTGCGCATCACCCCTTGGGATTGGATATAGGCTGAAGAGTCCAAGTCTTTCATACTTTCCTCCATACATATATTTATTTCAAGCGTATCTGACTAAGGAACTCAATTTGGATGACCATCAATTGTGGATCGATTCATACGATTGGGAGGGATCTCGCCTGAGGATGTATCTCAAGATTTTCCCATTATTTGATAGTGGTACTCACATGTTGAATAAAAGTGAGGTATTTCGAATTACAGAACAATTTATGTCATGGGAGTTTACTCGTGACGACTTGTTTGGCCCATACGAGCTTCTCAACTTCACATTCCCTGACCGTTCTCAGACTGTCATTTTCCAGACAGAGAAGACAGGGATTGGTGCTGGCATCTTGGTTGCCATTATAGTTGGATCTGTTGCCTGTATTCTTTTGATCGTAGCAGTAACCATACTTCTGTTCACTAGGCGTTCCAGTTACCGTCACAATTTATCAAGAAAAAACTTCTCTTCAAAGATTGGTCTGAAAATTGATGGTGTAAAAGCATTTTCATTCAAGGAAATGCAATCGGCTACTGGAAATTTCAACTGCTCGACTCAAGTTGGCCAAGGAGGTTATGGCAAGGTCTATAAAGGCATATTATCAGATAATTCAGTTGTAGCCATCAAGCGTGCAGAAGAAGGATCCTTACAAGGCCAAAAAGAATTTTTGACGGAGATAGAACTCTTATCACGAGTACATCACCGAAATTTGGTTTCCCTAATCGGATATTGTGATGAAGAAGGGGAACAAATGCTGGTTTATGAGTTCATGCCAAATGGAACTTTGCGGGACTGGATTTCTGGTTTTGAATTTTCTGCCAAAACTACAGTAAATCTGAACTTTCGTATGAGATTACAAATTGCTCTGGGTTCAGCTAAAGGTATACTGTATCTCCATACTGAAGCAAATCCTCCTATATATCATCGAGACATCAAAGCTAGAAACATACTCCTCGATGCCAAGCTCACTGCCAAAGTGGCTGATTTCGGATTGTCACGTCTTGCTCCTGATCTAGATTATGAAGGGGACGTTCCTGGACATATATCTACTGTTGTGAAGGGTACCCCAGGTTATCTTGATCCAGAATACTTTTTAACCCATAAATTGACCGATAAAAGTGATGTCTATAGCCTTGGAGTTGTGTTCTTGGAGCTCTTGACGGGTATGCACCCTATTTCGCACGGCAAAAACATCGTTCGTGAGGTAAAATTGGCACATCAAATGGGAACAGTTCTTTCAATTGTAGACACCAGGTTGGGTTCTTTCCCGTCTGAGTGTTTCGAGAGGTTTGTTGCTTTGGCCCTCAGTTGTTGCCATGACAAGCCAGAAGAGCGGCCGTCCATGCTGGTTGTGGTAAGGGAGCTGGAGAACATACTGAACATGATGCCTGATGACAGCGGTGCCTTGTACTCGGAATTGTCCCCGAGATCAAGTTCCAGGCTTCCATCCTCACCGACATCAACGTCCTGCATCACTCGAGACCAGTTTGCATCGGGAAGCATTTCAGGGAGCGACCTCATCAGTGGCGTTGTGCCAACCATCAGACCTCGCTGA 2871 42.63 MPTRRDRVCVFLLSCCCSLLLAGAATTDPSDVEALLALKRSLIDPMDRLKNWNEGDPCTTNWTGVVCNYSDGAVGNLRVNELQLLNKNLSGNLAPEIGQLSQLKKLDFMWNDLTGSIPKEIGSIRSLKLLLLNGNKLSGHLPDELGNLTNLIRFQIDENQISGPIPKSYANLISVKHLHFNNNTLSGEIPSELSKLSNLLHMLLDNNNLSGSLPPEFSTLPKLRILQLDNNNFEGAIPASYDNFSTLVKLSLRNCSLEGPILNFSKIADLSYLDLSWNHFTGPIPPYNLSSKITTIILSHNQLNGSIPSSFSDLPVLQKLSLENNFLNGSVPSALWEKMSFNSSARLTLDLRNNLFSSISGSTNPPANVTLRLEGNPICQNLRGQNSNLFCASKIVEDGLLRSSRNFNETCPVRGCPTDSFFEYVPDSPDPCFCASPLGIGYRLKSPSLSYFPPYIYLFQAYLTKELNLDDHQLWIDSYDWEGSRLRMYLKIFPLFDSGTHMLNKSEVFRITEQFMSWEFTRDDLFGPYELLNFTFPDRSQTVIFQTEKTGIGAGILVAIIVGSVACILLIVAVTILLFTRRSSYRHNLSRKNFSSKIGLKIDGVKAFSFKEMQSATGNFNCSTQVGQGGYGKVYKGILSDNSVVAIKRAEEGSLQGQKEFLTEIELLSRVHHRNLVSLIGYCDEEGEQMLVYEFMPNGTLRDWISGFEFSAKTTVNLNFRMRLQIALGSAKGILYLHTEANPPIYHRDIKARNILLDAKLTAKVADFGLSRLAPDLDYEGDVPGHISTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVKLAHQMGTVLSIVDTRLGSFPSECFERFVALALSCCHDKPEERPSMLVVVRELENILNMMPDDSGALYSELSPRSSSRLPSSPTSTSCITRDQFASGSISGSDLISGVVPTIRPR 956
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 62368830 62381178 - Tan0005689.1 Tan03g0690 746194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0690 956 PANTHER RECEPTOR-LIKE PROTEIN 55 44 895 - -
Tan03g0690 956 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 29 190 - -
Tan03g0690 956 Gene3D Transferase(Phosphotransferase) domain 1 696 907 - -
Tan03g0690 956 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 696 909 - -
Tan03g0690 956 ProSiteProfiles Protein kinase domain profile. 620 898 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0690 956 ProSitePatterns Protein kinases ATP-binding region signature. 626 648 IPR017441 GO:0005524(InterPro)
Tan03g0690 956 Gene3D Phosphorylase Kinase; domain 1 591 695 - -
Tan03g0690 956 SUPERFAMILY Protein kinase-like (PK-like) 605 926 IPR011009 -
Tan03g0690 956 Gene3D Ribonuclease Inhibitor 28 287 IPR032675 -
Tan03g0690 956 SUPERFAMILY L domain-like 237 380 - -
Tan03g0690 956 Gene3D Ribonuclease Inhibitor 288 401 IPR032675 -
Tan03g0690 956 ProSitePatterns Serine/Threonine protein kinases active-site signature. 745 757 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g0690 956 FunFam Leucine-rich repeat protein kinase family protein 584 695 - -
Tan03g0690 956 Pfam Protein kinase domain 622 890 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0690 956 Pfam Leucine Rich Repeat 270 286 IPR001611 GO:0005515(InterPro)
Tan03g0690 956 Pfam Leucine Rich Repeat 198 220 IPR001611 GO:0005515(InterPro)
Tan03g0690 956 Pfam Leucine Rich Repeat 293 314 IPR001611 GO:0005515(InterPro)
Tan03g0690 956 Pfam Leucine Rich Repeat 175 196 IPR001611 GO:0005515(InterPro)
Tan03g0690 956 Pfam Leucine Rich Repeat 126 148 IPR001611 GO:0005515(InterPro)
Tan03g0690 956 SMART serkin_6 620 901 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0690 956 SUPERFAMILY L domain-like 26 286 - -
Tan03g0690 956 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Tan03g0690 956 CDD STKc_IRAK 626 897 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0690 Tan-Chr3:62368830 Tan10g1504 Tan-Chr10:23066185 1.20E-100 dispersed
Tan03g0690 Tan-Chr3:62368830 Tan03g0698 Tan-Chr3:62515479 2.90E-62 proximal
Tan08g2259 Tan-Chr8:74060821 Tan03g0690 Tan-Chr3:62368830 1.80E-96 transposed
Tan08g2448 Tan-Chr8:75682851 Tan03g0690 Tan-Chr3:62368830 5.00E-25 transposed
Tan08g2449 Tan-Chr8:75755826 Tan03g0690 Tan-Chr3:62368830 3.60E-178 transposed
Tan11g0375 Tan-Chr11:3035853 Tan03g0690 Tan-Chr3:62368830 6.60E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67283 PF00069 Pkinase 2.20E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0690 - - - 0.0