Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0719 ATGGCACAACCAATTGAATATGTTGAAACAGATCCATCTGGTCGCTATGGACGGTTTAGAGAAATTCTAGGCAAAGGAGCCATGAAGACAGTATATAAAGGCTTTGATGAAGTGCTTGGAATAGAAGTAGCTTGGAACCAAGTCCAACTCAAAGATGTCTTCCATTCCCCTGAGGATTTACAGCGTCTCTACTCAGAAGTTCATCTCCTCAAGAACCTCAACCACGACTCGATCATCCGATTCTACGCTTCGTGGATCGATACTCATCGACGAACGTTCAACTTCATCACCGAAATGTTCACCTCAGGCAGCCTTAGAGAGTACCGAAAAAAGTATCGAAAAGTCGATATCGGCGCAATCAAGAACTGGGGTCGTCAAATCTTGCGCGGATTGGCTTATCTTCATGGTCATGATCCTCCTGTAATTCATAGAGATCTCAAGTGTGATAACATATTCATCAATGGCCATCTTGGACAAGTTAAAATTGGTGACTTGGGACTCGCAGCAATCCTTCATGATTCTCAACATGCCCACAGCGTCATAGGTACACCAGAGTTCATGGCGCCAGAGCTATATGATGAGGAATATAATGAGCTTGTAGATGTTTATTCGTTTGGGATGTGTGTGATAGAGATGCTCACTTTGGAGTATCCCTATAGCGAGTGCTCTAACCCTGCTCAGATATACAAGAAAGTCACTTCAGGAAAATTGCCCAATGCATTGTACAAGATCAAAGACTTGGAGGCCCAAAAATTTGTGAGAAAGTGCTTGGAGAATGTTTCAAAGAGGGTGCCTGCTAAAGAGCTCTTGCTTGATCCATTTCTAGCTTCCAATGATGATGATGATCATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGGTTCTAATAATTATGAAGGATTTTGTTTATCTTTAACTCCAAAGAAATCATCAGCAGTTCCAGTGGCAAGAAGGACAGACATGGCCATTTCTGGATCCATGAATCACAAAGATGATACAGTTTTTCTCAAAGTGCACATTAAAGTAAAGAATGGTAATGCTAAGAATGTATACTTTGCATTTGACACCATAAACGATACTGCAATCGATGTTGCGACCGAGATGGTGAAAGAGTTGGAAATAAGTGACTGGGATCCATTGGAGATCGCTGTGATGATAAAGAAGGAAATATCTACATTGATTCCAAATTGGAAGGAATGGAACTTTTCTAAAAGCCACCATCAAGATAGTTTCCACTACGAAGATGGCGACAACGACGATGACGATGATGAAAACGACAATATTGTAACACCACATCCTTTCTACTCTTGCTCCTCTCATGCCTCTTCCTCAAATTCTCTTCAGGGTTTCTACTCTTTCTATGACAATCTCCATGATCATTCTGGAGGAAGGAATGAGACCTCTAATAATGCCCCTCAATGGTTTCAAGAGGGCTTTGTCATTGATGAAGATGCAAGTTCTAGCTGCTCTCTTAACTCTTTCAATTACTCTGATATAAGCTTTTACTCAAGCAATGAAGATCATGAGTATGAATGTGACTCACATCTCAAAGGAAGAGAGCCTAATTCCATCTCAACAACCAAGCAACCTACAAGATTTTGCCCCACCGTGAAGATAGACACACACCATTTGAGGCACAAGGACAATGAAATAATGCTGGATCGAGAATTCGCTGGACAATATCGATCAAATAATAAGTACTCGCATCGACTTACGAGGGTGAAATCGATGGCGAACCTCCATAGTGAGACGTTGTACCGATCCTTAGTACAAATGTTGTTGAAAAAGCGATTGTTCAATACGGTGGGCGCAATGGAGAATATTGGATACCAAAAGCCATAG 1854 40.45 MAQPIEYVETDPSGRYGRFREILGKGAMKTVYKGFDEVLGIEVAWNQVQLKDVFHSPEDLQRLYSEVHLLKNLNHDSIIRFYASWIDTHRRTFNFITEMFTSGSLREYRKKYRKVDIGAIKNWGRQILRGLAYLHGHDPPVIHRDLKCDNIFINGHLGQVKIGDLGLAAILHDSQHAHSVIGTPEFMAPELYDEEYNELVDVYSFGMCVIEMLTLEYPYSECSNPAQIYKKVTSGKLPNALYKIKDLEAQKFVRKCLENVSKRVPAKELLLDPFLASNDDDDHNNNNNNNNNNNNNNGSNNYEGFCLSLTPKKSSAVPVARRTDMAISGSMNHKDDTVFLKVHIKVKNGNAKNVYFAFDTINDTAIDVATEMVKELEISDWDPLEIAVMIKKEISTLIPNWKEWNFSKSHHQDSFHYEDGDNDDDDDENDNIVTPHPFYSCSSHASSSNSLQGFYSFYDNLHDHSGGRNETSNNAPQWFQEGFVIDEDASSSCSLNSFNYSDISFYSSNEDHEYECDSHLKGREPNSISTTKQPTRFCPTVKIDTHHLRHKDNEIMLDREFAGQYRSNNKYSHRLTRVKSMANLHSETLYRSLVQMLLKKRLFNTVGAMENIGYQKP 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 62706325 62714368 + Tan0008918.1 Tan03g0719 746223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0719 617 Gene3D - 327 403 - -
Tan03g0719 617 Gene3D Phosphorylase Kinase; domain 1 2 98 - -
Tan03g0719 617 MobiDBLite consensus disorder prediction 280 298 - -
Tan03g0719 617 FunFam probable serine/threonine-protein kinase WNK9 100 281 - -
Tan03g0719 617 FunFam Probable serine/threonine-protein kinase WNK1 2 98 - -
Tan03g0719 617 CDD STKc_WNK 15 275 - -
Tan03g0719 617 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0719 617 MobiDBLite consensus disorder prediction 275 298 - -
Tan03g0719 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g0719 617 ProSiteProfiles Protein kinase domain profile. 17 275 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0719 617 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 611 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Tan03g0719 617 SUPERFAMILY Protein kinase-like (PK-like) 19 276 IPR011009 -
Tan03g0719 617 Gene3D Transferase(Phosphotransferase) domain 1 100 282 - -
Tan03g0719 617 SMART serkin_6 17 275 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0719 Tan-Chr3:62706325 Tan05g0540 Tan-Chr5:3779961 1.10E-174 dispersed
Tan03g0719 Tan-Chr3:62706325 Tan08g1774 Tan-Chr8:69733366 1.30E-23 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67293 PF00069 Pkinase 8.70E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0719 K08867 - csv:101207665 909.057