Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0723 ATGCCGGAGTTCGACGACGGAAATTCTTCGCCGGAACTTGCCGGTGCCGACGGGATTCTGTTCGGAAAATACGAACTCGGGAAGCTTTTGGGATGTGGAGCCTTCGCGAAGGTCTTCCATGGCAGAAACGTTCTTACGGGACAGAGCGTTGCGATTAAAGCCGTTAACAAACTCAAGGTTCTCAAAGGCGGTTTCACGGCGCACGTTAAGAGAGAAATCGCTATCATGCGCCGCCTTCGTCATCCAAACGTCGTTCGTCTCTTCGAAGTTCTCGCCACGAAGAAGAAGATTTATTTCGTCATGGAGTTCGCCAAGGGAGGAGAACTCTTCGCCAAGGTTTCCAAGGGGCGATTCAGTGAGAATCTCAGCCGTCGGTACTTTCAGCAGTTGATCACCGCCGTTGGATACTGTCATTCCAGAGGAATTTTTCATCGCGATTTGAAGCCGGAGAATCTCCTTCTCGATGACAATTTCGATCTCAGAGTTTCGGATTTTGGACTCAGCGCTTTCACCGATCAGATTCGTCCCGACGGATTGCTCCACACGCTCTGTGGAACTCCGGCCTACGTCGCGCCGGAGATTCTCGCCAAGAAAGGCTACGACGGCGCTAAGATCGACGTCTGGTCCTGCGGTATAATCCTCTATGTTCTCACTACTGGATACCTTCCGTTTAATGATTCCAATTTAATGGCGATGTATCGGAAGATTTACAGAGGCGATTTCCGGTGCCCTAAGTGGACGTCGCCAGATCTGCGGCGGTTTCTGTCCAGGCTTCTGGATACGAATCCGGAGACGAGGATCACCGTCGATGAGATTCATCAAGATCCGTGGTTCAGAAAGGGATTTCAGGAGGAGAAGCTTCAATTTGAAGATTATTCTAGTTCAGAGCTTTACGGCGATGTGAACAATTCGAAATGTCTGAATGCTTTTGATCTTATTTCGTTCTCACCTGGCTTTGATTTGACTGGATTGATCAACGAGACGGAATTTTCGTCCGGCGTTGAGAGGTTCCTCTCCGCTGAGTCGCCAGAGAAGATCATTGTGACGGTGGAGGAGGTTTCGAAGTCGGAAAATGCGGCCGTGGAGAAGAACGGCTGGGGAGCTAAAGTGGAAGGCCACGACGGCGGTTTCGTCGCCGTTATTGATATTTTCCGGCTGACGGAGGAATTGGTGGTTGTTGAGATCAAAAACAGAGTGAGGGAAATTGATCAAATTTGGAAAGATAAATTGAGACCTCAACTCGAATGTTTAATCTACCGGTCGGACTGA 1269 49.57 MPEFDDGNSSPELAGADGILFGKYELGKLLGCGAFAKVFHGRNVLTGQSVAIKAVNKLKVLKGGFTAHVKREIAIMRRLRHPNVVRLFEVLATKKKIYFVMEFAKGGELFAKVSKGRFSENLSRRYFQQLITAVGYCHSRGIFHRDLKPENLLLDDNFDLRVSDFGLSAFTDQIRPDGLLHTLCGTPAYVAPEILAKKGYDGAKIDVWSCGIILYVLTTGYLPFNDSNLMAMYRKIYRGDFRCPKWTSPDLRRFLSRLLDTNPETRITVDEIHQDPWFRKGFQEEKLQFEDYSSSELYGDVNNSKCLNAFDLISFSPGFDLTGLINETEFSSGVERFLSAESPEKIIVTVEEVSKSENAAVEKNGWGAKVEGHDGGFVAVIDIFRLTEELVVVEIKNRVREIDQIWKDKLRPQLECLIYRSD 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 62846594 62848371 + Tan0002627.1 Tan03g0723 746227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0723 422 ProSiteProfiles NAF domain profile. 302 326 IPR018451 GO:0007165(InterPro)
Tan03g0723 422 ProSiteProfiles Protein kinase domain profile. 24 278 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0723 422 SMART serkin_6 24 278 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0723 422 FunFam Non-specific serine/threonine protein kinase 9 105 - -
Tan03g0723 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g0723 422 Pfam NAF domain 305 363 IPR004041 GO:0007165(InterPro)
Tan03g0723 422 SUPERFAMILY Protein kinase-like (PK-like) 20 290 IPR011009 -
Tan03g0723 422 Gene3D Transferase(Phosphotransferase) domain 1 104 284 - -
Tan03g0723 422 CDD CIPK_C 308 414 - -
Tan03g0723 422 Gene3D Kinase associated domain 1, KA1 303 420 - -
Tan03g0723 422 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 17 397 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Tan03g0723 422 FunFam Non-specific serine/threonine protein kinase 15 302 - -
Tan03g0723 422 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524(InterPro)
Tan03g0723 422 Pfam Protein kinase domain 24 278 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0723 422 Gene3D Phosphorylase Kinase; domain 1 16 103 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0723 Tan-Chr3:62846594 Tan05g0537 Tan-Chr5:3755413 5.50E-151 dispersed
Tan03g0723 Tan-Chr3:62846594 Tan03g0726 Tan-Chr3:62935361 7.30E-111 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67294 PF00069 Pkinase 1.60E-70 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0723 - - - 0.0