Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0726 ATGGAGAACAAAGGGGCTGTCTTGATGCAACGTTATGAATTAGGAAGGCTGTTGGGGCAGGGAACCTTTGCCAAGGTTTACTATGCTAGAGACATTAAAACTGGCATGAGTGTGGCTATTAAAGTTATTGACAAAGAGAAGATCTTGAAGGTTGGGATGATTGATCAAATCAAGAGGGAGATCTCTGTCATGAGACTAGTTAAGCATCCCAACGTAGTTGAACTTTATGAGGTTATGGCAAGCAAAACTAAAATTTACTTTGTCATGGAATATGTCAAAGGCGGTGAGTTATTCAATAAGGTATCCAAAGGAAAGCTTAAAGAAGCTGCTGCGCGGAAATATTTTTGGCAGCTGATCAGTGCTGTCGATTATTGCCACAGTAGAGGGGTATGCCATCGAGATTTGAAACCAGAAAATTTACTTTTGGATGAAAATGGTAATCTGAAGGTTTCTGATTTTGGGTTGAGTTCCCTTGCTGAATCTAAACGCCAAGATGGATTGCTCCATACTACCTGTGGGACGCCTGCTTACGTTGCTCCAGAAGTCATTAACAGGAGAGGTTATGATGGATGCAAAGCTGATATTTGGTCGTGTGGAGTGATCTTATTCGTTCTATTGGCTGGTTTTCTCCCATTCCACGATTCAAATCTAATGGAGATGTATAAGAAGATTGGAAAAGGAGAATTTAAATTCCCCAACTGGTTTACACCAGAGGCGCGCAAGCTATTGTCAAAGATTTTGGATCCTAACCCGAATACCAGGATATCTATTGCCAAAATAATGGCAAGTTCTTGGTTAAGGAGGGGGTTGGATGTGAAACCCCAAATTAATGCAGAAGGGAAAGAAGTTGCTCCTTTAGATGTTGATGCAGTTTTTGTGTCAACGACCGAAGGGGACAGAGATTCTGTTAGAGAGTGGAAGCAAGAAGTGGAAAAGCCATTGAATTTGAATGCTTTTGACATAATCTCCTTGTCAGCAGGTTTCGATTTGTCAGGTTTGTTTGAGGAGACTGATGAAAAGAAAGAAGTAAGATTCACATCCAACAAGCCTGCGCCCACCATCATCTCAAAACTGCAAGACGTTGCAAAGTGCTTGAAGTTGAAGATCAAGAAGAAAGACAGAGGCCTATTGAAGATCGAAGGATGTAAGGAAGGTCGAAAAGGAGCTGTATGTATCGATGCCGAGATTTTCGAGGTCACCCCATCATTCCATATAGTGGAAATGAAGAAATCAAATGGAGATACACTGGAATATCACAAGATTATGAAAGACGATATAAGACCTGCTCTGAAGGATATCATATGGACCTGGCAAGGCGAGCAGCAGCAGCAACAACAACCGCTATCACAAGCAGAACAACAAGGGCAAGAATCGCAACAACAGTCTTCGATTTCGCCAGTTACTACTGTATTGCATTATAACACAGGACTGGTGGAGGCATCTTAG 1446 41.84 MENKGAVLMQRYELGRLLGQGTFAKVYYARDIKTGMSVAIKVIDKEKILKVGMIDQIKREISVMRLVKHPNVVELYEVMASKTKIYFVMEYVKGGELFNKVSKGKLKEAAARKYFWQLISAVDYCHSRGVCHRDLKPENLLLDENGNLKVSDFGLSSLAESKRQDGLLHTTCGTPAYVAPEVINRRGYDGCKADIWSCGVILFVLLAGFLPFHDSNLMEMYKKIGKGEFKFPNWFTPEARKLLSKILDPNPNTRISIAKIMASSWLRRGLDVKPQINAEGKEVAPLDVDAVFVSTTEGDRDSVREWKQEVEKPLNLNAFDIISLSAGFDLSGLFEETDEKKEVRFTSNKPAPTIISKLQDVAKCLKLKIKKKDRGLLKIEGCKEGRKGAVCIDAEIFEVTPSFHIVEMKKSNGDTLEYHKIMKDDIRPALKDIIWTWQGEQQQQQQPLSQAEQQGQESQQQSSISPVTTVLHYNTGLVEAS 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 62935361 62936806 - Tan0002324.1 Tan03g0726 746230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0726 481 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 424 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Tan03g0726 481 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524(InterPro)
Tan03g0726 481 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Tan03g0726 481 Gene3D Kinase associated domain 1, KA1 310 436 - -
Tan03g0726 481 SMART serkin_6 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0726 481 Pfam NAF domain 313 371 IPR004041 GO:0007165(InterPro)
Tan03g0726 481 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0726 481 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165(InterPro)
Tan03g0726 481 FunFam Non-specific serine/threonine protein kinase 2 290 - -
Tan03g0726 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g0726 481 MobiDBLite consensus disorder prediction 444 465 - -
Tan03g0726 481 FunFam Non-specific serine/threonine protein kinase 311 435 - -
Tan03g0726 481 CDD CIPK_C 317 431 - -
Tan03g0726 481 Gene3D Transferase(Phosphotransferase) domain 1 92 271 - -
Tan03g0726 481 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Tan03g0726 481 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Tan03g0726 481 CDD STKc_SnRK3 11 265 - -
Tan03g0726 481 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3571 Tan-Chr1:100695837 Tan03g0726 Tan-Chr3:62935361 4.60E-140 dispersed
Tan03g0726 Tan-Chr3:62935361 Tan05g0536 Tan-Chr5:3750566 1.70E-175 dispersed
Tan03g0723 Tan-Chr3:62846594 Tan03g0726 Tan-Chr3:62935361 7.30E-111 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67295 PF00069 Pkinase 1.10E-76 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0726 K07198 - csv:116406388 790.415