Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g0759 | ATGGACACAACCACAAGCGTCTCGCACTCTCCCGATTTCCGCCCCGAAATCTCAGTATCGCCGCAGACTCACGACGGCCTTTCCTTCTGGCAGTTCATGATCGCCGGATCAATCGCAGGGTCCGCCGAGCACATGGCCATGTTTCCAGTGGACACACTGAAGACCCGAATACAAGCCCTCGGTGGATCATCTACAGTCCGGAAAGCACTCGGGTCGATCCTGAAGGTGGAAGGACCGGGCGGGCTCTACCGCGGAATCGGAGCAATGGGTCTCGGAGCAGGGCCTGCACACGCCGTATACTTCTCAGTATACGAAGCGTGCAAAGAGGGGTTGTCGAAAGGAAATGAGAACAACCCATTGGCGCACGGCATTTCAGGAGTGTGTGCAACGGTGGCGAGCGACGCCGTGTTGACGCCGATGGATGTGGTGAAACAGAGGCTGCAGTTGAAGAGCAGTCCTTATAAGGGAGTGGGGGAGTGCGTGAAGAGGGTTTTGGTTGAGGAAGGAATTGGGGCGCTCTATGCTTCATATTGGACGACGGTTTTGATGAATGCACCTTATACGGCTCTCCATTTTGCGACTTATGAAGCAGTGAAAAGGGGGTTGAAGGAGGCCTTGCCGGGAAGTGAGGATGAGAGTTTGGTTGTTCATGCTACGGCTGGTGCGGCTGCTGGGTCTTTTGCTGCTGCTATCACAACGCCATTAGACGTTGTGAAAACTCGGCTGCAGTGCCAGGGAGTGTGTGGGTGCGACAGATTTTCAAGCAGTTCAATTGGGTACGTACTTGGGCATGTGGTGAAGAAGGATGGGTACAATGGCCTGATGAGAGGATGGATTCCAAGGACGCTGTTCCATGCCCCTGCTGCCGCAATTTGCTGGTCCACCTACGAAGCTTCAAAAGCCTTCTTCCAACAGCTCCACCATAACAACAATTAG | 936 | 54.17 | MDTTTSVSHSPDFRPEISVSPQTHDGLSFWQFMIAGSIAGSAEHMAMFPVDTLKTRIQALGGSSTVRKALGSILKVEGPGGLYRGIGAMGLGAGPAHAVYFSVYEACKEGLSKGNENNPLAHGISGVCATVASDAVLTPMDVVKQRLQLKSSPYKGVGECVKRVLVEEGIGALYASYWTTVLMNAPYTALHFATYEAVKRGLKEALPGSEDESLVVHATAGAAAGSFAAAITTPLDVVKTRLQCQGVCGCDRFSSSSIGYVLGHVVKKDGYNGLMRGWIPRTLFHAPAAAICWSTYEASKAFFQQLHHNNN | 311 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 63552943 | 63555091 | - | Tan0012634.1 | Tan03g0759 | 746263 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g0759 | 311 | PRINTS | Mitochondrial carrier protein signature | 45 | 59 | IPR002067 | GO:0055085(InterPro) | |
Tan03g0759 | 311 | PRINTS | Mitochondrial carrier protein signature | 221 | 243 | IPR002067 | GO:0055085(InterPro) | |
Tan03g0759 | 311 | PRINTS | Mitochondrial carrier protein signature | 174 | 192 | IPR002067 | GO:0055085(InterPro) | |
Tan03g0759 | 311 | PRINTS | Mitochondrial carrier protein signature | 132 | 150 | IPR002067 | GO:0055085(InterPro) | |
Tan03g0759 | 311 | Gene3D | Mitochondrial carrier domain | 13 | 151 | IPR023395 | - | |
Tan03g0759 | 311 | PANTHER | MITOFERRIN-1-RELATED | 20 | 305 | - | GO:0015093(PANTHER)|GO:0031966(PANTHER)|GO:0048250(PANTHER) | |
Tan03g0759 | 311 | Gene3D | Mitochondrial carrier domain | 152 | 311 | IPR023395 | - | |
Tan03g0759 | 311 | SUPERFAMILY | Mitochondrial carrier | 25 | 297 | IPR023395 | - | |
Tan03g0759 | 311 | Pfam | Mitochondrial carrier protein | 27 | 113 | IPR018108 | - | |
Tan03g0759 | 311 | Pfam | Mitochondrial carrier protein | 212 | 305 | IPR018108 | - | |
Tan03g0759 | 311 | Pfam | Mitochondrial carrier protein | 116 | 203 | IPR018108 | - | |
Tan03g0759 | 311 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 27 | 110 | IPR018108 | - | |
Tan03g0759 | 311 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 212 | 302 | IPR018108 | - | |
Tan03g0759 | 311 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 117 | 201 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g0759 | Tan-Chr3:63552943 | Tan05g0522 | Tan-Chr5:3603389 | 1.00E-122 | dispersed | |
Tan03g0759 | Tan-Chr3:63552943 | Tan04g2657 | Tan-Chr4:85947083 | 1.20E-09 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g0759 | K15113 | - | csv:101210464 | 531.176 |