Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0759 ATGGACACAACCACAAGCGTCTCGCACTCTCCCGATTTCCGCCCCGAAATCTCAGTATCGCCGCAGACTCACGACGGCCTTTCCTTCTGGCAGTTCATGATCGCCGGATCAATCGCAGGGTCCGCCGAGCACATGGCCATGTTTCCAGTGGACACACTGAAGACCCGAATACAAGCCCTCGGTGGATCATCTACAGTCCGGAAAGCACTCGGGTCGATCCTGAAGGTGGAAGGACCGGGCGGGCTCTACCGCGGAATCGGAGCAATGGGTCTCGGAGCAGGGCCTGCACACGCCGTATACTTCTCAGTATACGAAGCGTGCAAAGAGGGGTTGTCGAAAGGAAATGAGAACAACCCATTGGCGCACGGCATTTCAGGAGTGTGTGCAACGGTGGCGAGCGACGCCGTGTTGACGCCGATGGATGTGGTGAAACAGAGGCTGCAGTTGAAGAGCAGTCCTTATAAGGGAGTGGGGGAGTGCGTGAAGAGGGTTTTGGTTGAGGAAGGAATTGGGGCGCTCTATGCTTCATATTGGACGACGGTTTTGATGAATGCACCTTATACGGCTCTCCATTTTGCGACTTATGAAGCAGTGAAAAGGGGGTTGAAGGAGGCCTTGCCGGGAAGTGAGGATGAGAGTTTGGTTGTTCATGCTACGGCTGGTGCGGCTGCTGGGTCTTTTGCTGCTGCTATCACAACGCCATTAGACGTTGTGAAAACTCGGCTGCAGTGCCAGGGAGTGTGTGGGTGCGACAGATTTTCAAGCAGTTCAATTGGGTACGTACTTGGGCATGTGGTGAAGAAGGATGGGTACAATGGCCTGATGAGAGGATGGATTCCAAGGACGCTGTTCCATGCCCCTGCTGCCGCAATTTGCTGGTCCACCTACGAAGCTTCAAAAGCCTTCTTCCAACAGCTCCACCATAACAACAATTAG 936 54.17 MDTTTSVSHSPDFRPEISVSPQTHDGLSFWQFMIAGSIAGSAEHMAMFPVDTLKTRIQALGGSSTVRKALGSILKVEGPGGLYRGIGAMGLGAGPAHAVYFSVYEACKEGLSKGNENNPLAHGISGVCATVASDAVLTPMDVVKQRLQLKSSPYKGVGECVKRVLVEEGIGALYASYWTTVLMNAPYTALHFATYEAVKRGLKEALPGSEDESLVVHATAGAAAGSFAAAITTPLDVVKTRLQCQGVCGCDRFSSSSIGYVLGHVVKKDGYNGLMRGWIPRTLFHAPAAAICWSTYEASKAFFQQLHHNNN 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 63552943 63555091 - Tan0012634.1 Tan03g0759 746263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0759 311 PRINTS Mitochondrial carrier protein signature 45 59 IPR002067 GO:0055085(InterPro)
Tan03g0759 311 PRINTS Mitochondrial carrier protein signature 221 243 IPR002067 GO:0055085(InterPro)
Tan03g0759 311 PRINTS Mitochondrial carrier protein signature 174 192 IPR002067 GO:0055085(InterPro)
Tan03g0759 311 PRINTS Mitochondrial carrier protein signature 132 150 IPR002067 GO:0055085(InterPro)
Tan03g0759 311 Gene3D Mitochondrial carrier domain 13 151 IPR023395 -
Tan03g0759 311 PANTHER MITOFERRIN-1-RELATED 20 305 - GO:0015093(PANTHER)|GO:0031966(PANTHER)|GO:0048250(PANTHER)
Tan03g0759 311 Gene3D Mitochondrial carrier domain 152 311 IPR023395 -
Tan03g0759 311 SUPERFAMILY Mitochondrial carrier 25 297 IPR023395 -
Tan03g0759 311 Pfam Mitochondrial carrier protein 27 113 IPR018108 -
Tan03g0759 311 Pfam Mitochondrial carrier protein 212 305 IPR018108 -
Tan03g0759 311 Pfam Mitochondrial carrier protein 116 203 IPR018108 -
Tan03g0759 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 110 IPR018108 -
Tan03g0759 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 302 IPR018108 -
Tan03g0759 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 117 201 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0759 Tan-Chr3:63552943 Tan05g0522 Tan-Chr5:3603389 1.00E-122 dispersed
Tan03g0759 Tan-Chr3:63552943 Tan04g2657 Tan-Chr4:85947083 1.20E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0759 K15113 - csv:101210464 531.176