Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g0807 | ATGGCCGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACACGCCTCGCCGACGTGCGGCCGAGTTCCGGGCGAGTCCAAGCCCGATTCTCATTCGGCAAAAAGAAAAGTCCGGCGAAGAAATCGCCGTCGTCGAGGCAGATTTCCGACCGGCCGCTGTGGTTCCCGGGAGCCAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTCGGCGACTACGGGTTCGATCCGTTCGGGTTGGGGAAACCGGCAGAGTATTTGCAGTACGATTTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCCGGAGATATAATCGGAACGAGATTTGAGAACTCGGAAGTGAAATCGACGCCGTTTCAGCCGTACACGGAGGTTTTTGGATTGCAGAGATTTCGTGAGTGCGAGCTGATCCATGGAAGGTGGGCCATGTTGGCTACACTTGGCGCTCTCTCTGTTGAATGGCTCACTGGCATCACTTGGCAAGACGCTGGAAAAGTAGAATTAGTGGAAGGTTCATCCTACCTTGGGCAGCCCCTTCCGTTCTCCATCACGACATTGATCTGGATCGAAGTTCTGGTGATCGGATACATCGAGTTTCAGAGGAACGCCGAGCTCGACCCGGAGAAGAGATTGTACCCCGGGGGCAAGTATTTTGACCCCTTGGGCTTGGCCGAGGATCCCGAGAAGAAAGCTATTTTACAATTGGCTGAGATCAAGCATGCTCGCCTCGCCATGGTTGCCTTCCTTGGCTTTGCTGTTCAAGCTGCTGCCACTGGCAAAGGCCCGCTCAATAACTGGGCAACCCATCTCAGTGACCCGCTCCATACCACTATTATTGACACCTTCTCTTCTTCTTAA | 861 | 55.05 | MAATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS | 286 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 64177100 | 64179882 | - | Tan0013339.1 | Tan03g0807 | 746311 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g0807 | 286 | Pfam | Chlorophyll A-B binding protein | 60 | 256 | IPR022796 | - | |
Tan03g0807 | 286 | Gene3D | Chlorophyll a/b binding protein domain | 54 | 286 | - | - | |
Tan03g0807 | 286 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 107 | 285 | - | - | |
Tan03g0807 | 286 | SUPERFAMILY | Chlorophyll a-b binding protein | 45 | 284 | - | - | |
Tan03g0807 | 286 | MobiDBLite | consensus disorder prediction | 30 | 51 | - | - | |
Tan03g0807 | 286 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 5 | 280 | IPR001344 | GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g0807 | Tan-Chr3:64177100 | Tan11g0846 | Tan-Chr11:6949329 | 1.00E-39 | dispersed | |
Tan03g0807 | Tan-Chr3:64177100 | Tan05g0624 | Tan-Chr5:4631506 | 2.40E-25 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g0807 | K08915 | - | csv:101208740 | 545.428 |