Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0807 ATGGCCGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACACGCCTCGCCGACGTGCGGCCGAGTTCCGGGCGAGTCCAAGCCCGATTCTCATTCGGCAAAAAGAAAAGTCCGGCGAAGAAATCGCCGTCGTCGAGGCAGATTTCCGACCGGCCGCTGTGGTTCCCGGGAGCCAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTCGGCGACTACGGGTTCGATCCGTTCGGGTTGGGGAAACCGGCAGAGTATTTGCAGTACGATTTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCCGGAGATATAATCGGAACGAGATTTGAGAACTCGGAAGTGAAATCGACGCCGTTTCAGCCGTACACGGAGGTTTTTGGATTGCAGAGATTTCGTGAGTGCGAGCTGATCCATGGAAGGTGGGCCATGTTGGCTACACTTGGCGCTCTCTCTGTTGAATGGCTCACTGGCATCACTTGGCAAGACGCTGGAAAAGTAGAATTAGTGGAAGGTTCATCCTACCTTGGGCAGCCCCTTCCGTTCTCCATCACGACATTGATCTGGATCGAAGTTCTGGTGATCGGATACATCGAGTTTCAGAGGAACGCCGAGCTCGACCCGGAGAAGAGATTGTACCCCGGGGGCAAGTATTTTGACCCCTTGGGCTTGGCCGAGGATCCCGAGAAGAAAGCTATTTTACAATTGGCTGAGATCAAGCATGCTCGCCTCGCCATGGTTGCCTTCCTTGGCTTTGCTGTTCAAGCTGCTGCCACTGGCAAAGGCCCGCTCAATAACTGGGCAACCCATCTCAGTGACCCGCTCCATACCACTATTATTGACACCTTCTCTTCTTCTTAA 861 55.05 MAATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 64177100 64179882 - Tan0013339.1 Tan03g0807 746311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0807 286 Pfam Chlorophyll A-B binding protein 60 256 IPR022796 -
Tan03g0807 286 Gene3D Chlorophyll a/b binding protein domain 54 286 - -
Tan03g0807 286 FunFam Chlorophyll a-b binding protein, chloroplastic 107 285 - -
Tan03g0807 286 SUPERFAMILY Chlorophyll a-b binding protein 45 284 - -
Tan03g0807 286 MobiDBLite consensus disorder prediction 30 51 - -
Tan03g0807 286 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 5 280 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0807 Tan-Chr3:64177100 Tan11g0846 Tan-Chr11:6949329 1.00E-39 dispersed
Tan03g0807 Tan-Chr3:64177100 Tan05g0624 Tan-Chr5:4631506 2.40E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0807 K08915 - csv:101208740 545.428