Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0831 ATGATTGTTTCCATGGACTTAAATGCCTCGCCGGTGCCCGAAGAGGATGAAGAGACGTTTGAGAGGCATGAAGAGGTGTATAGTGCTCCAGAGGAACATATAGAGTCTGCTGTTAGTATAGCACGGCGGGAGCGAGAAGAAAGAAAAAGGCGGTTGAAAAGAGATCGCTCTATTGAGAGACCAGTGCATGAATACCAACAACCTGCACGGGATCAGTTTTACCCTGCTAAAAACCAAAAAACTGATAGAAACAGGCTTCCCCCAGGTTGGTTGGATTGCCCTGCATTTGGTCAAGAAATATGTTGCATGATTCCTTCCAAGGTTCCTCTGGGTGAATCCTTCAATGATTGCATAACACCTGGTAAAAGATACTCATTTAAACAAGTGATCCATCAGCAGAGAGTTTGGGGAAGGAAACTCGGTTTGGTGATTGATTTGACAAATTCTTACCGTTATTATACAACAACAGATTTGAATAAAGAGGGTATCAAGTATGTTAAGATTCCATGCAAGGGGAGGGATTCTGTACCTGACAACAAGTCAGTCAATATGTTCGTTTACGAGGTCATTCAGTTCCTTTCTCGTCAGAAACATTCAAAGAAGTATATTCTTGTCCACTGCACACATGGCCATAACCGCACTGGATATATGATCATAAATTATCTTGTGCGTGCACTATCCATTTCTGTTACCCAGGCTCTTAAAATGTTTTCTGATGCACGCCCTCCTGGAATTTACAAGCCAGACTACATTGATGCGTTATATGCCTTTTATCATGAAAGAAAACCTGAAGTGGTTGTTTGCCCACCCACGCCTGAGTGGAAGAGATCTTCAGATCTTGATCTTAATGGCGAAGCAGTTCCAGATGATGATGATGATGGAGGTTCTGCTGCTCCTTTGAATGAAAATCATGATGATGGTAATCAAGTGATGACAAATGATGATATATTGGGGGATGAGATACCTGAGGACCAGGAACGTGCTTTGAAACACTTTTGCTATCAAATGCTTAAATTGAATGCTGGAGCAAGAGCAAACTTGCAATTTCCGGGGTCACATCCAGTGTCTCTTAACAGAGACAATCTGCAACTGCTAAGGCAACGGTATTATTATGCCACGTGGAAAGCTGATGGAACAAGATATATGATGCTAATAACCTTGGATGGATGCTACTTGATTGACAGGGGTTTTAAATTTCGAAGAGTCCAAATGAGATTTCCTTACAGAAATGCAAATGATGGCCTAGTTGAGAAGATTCACCACTATACACTACTTGATGGAGAAATGATAATTGATACTATGCCAGACTCGCAGAAGCAGGAGAGAAGATATCTTATCTATGATATGATGGCAATTAATCATGTTTCAGTTATTGAGCGTCCTTTCTATGAACGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTCGCAATTATGAGCGCCAGAATATTTACCAAAGCAGGAATCCTCATTATAGATATGACCTAGAGCCATTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACAGTTACCAAACTTTTGAAGGAGTTCATACCGAGGCTTTCACATGATGCCGATGGTCTAATATTTCAGGGATGGGATGATGCTTATGTTCCTCGAACTCATGAGGGTCTTTTAAAGTGGAAATATCCTGAAATGAACTCAGTCGACTTCCTATTTGAGGTTTTAGGTGAAGATGATTCTCAGATGCTTATTTTGTTCGAACGAGGAAAGAGGAAAACAATGGACGGAAATAGGGTTAAGTTCAAAGATGGCGATCCCTCCTTCTATTCAGGAAAGATTGTTGAGTGTTCTTGGGATTCTGATGAGCAAGTATGGGTCTGCATGCGTATCAGGACAGACAAAACAACTCCTAATGATTTCAATACTTATAAAAAGGTCATGCGCAGTATTAGAGACAATATCACGGAGGAGGATTTGTTGAAGGAGATTCATGAGATCATACGCTTGCCCATGTATGCTGATAGGATAAGGATTGATAGTAAAGCGGCCCAACATACGAATTCAACACGACGGAGGTGA 2049 41.29 MIVSMDLNASPVPEEDEETFERHEEVYSAPEEHIESAVSIARREREERKRRLKRDRSIERPVHEYQQPARDQFYPAKNQKTDRNRLPPGWLDCPAFGQEICCMIPSKVPLGESFNDCITPGKRYSFKQVIHQQRVWGRKLGLVIDLTNSYRYYTTTDLNKEGIKYVKIPCKGRDSVPDNKSVNMFVYEVIQFLSRQKHSKKYILVHCTHGHNRTGYMIINYLVRALSISVTQALKMFSDARPPGIYKPDYIDALYAFYHERKPEVVVCPPTPEWKRSSDLDLNGEAVPDDDDDGGSAAPLNENHDDGNQVMTNDDILGDEIPEDQERALKHFCYQMLKLNAGARANLQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITLDGCYLIDRGFKFRRVQMRFPYRNANDGLVEKIHHYTLLDGEMIIDTMPDSQKQERRYLIYDMMAINHVSVIERPFYERWKMLEKEVIEPRNYERQNIYQSRNPHYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDAYVPRTHEGLLKWKYPEMNSVDFLFEVLGEDDSQMLILFERGKRKTMDGNRVKFKDGDPSFYSGKIVECSWDSDEQVWVCMRIRTDKTTPNDFNTYKKVMRSIRDNITEEDLLKEIHEIIRLPMYADRIRIDSKAAQHTNSTRRR 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 64580445 64596998 - Tan0003133.3 Tan03g0831 746335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0831 682 MobiDBLite consensus disorder prediction 1 63 - -
Tan03g0831 682 Pfam mRNA capping enzyme, catalytic domain 353 551 IPR001339 GO:0004484(InterPro)|GO:0005524(InterPro)|GO:0006370(InterPro)
Tan03g0831 682 Gene3D Protein tyrosine phosphatase superfamily 82 295 IPR029021 -
Tan03g0831 682 Gene3D DNA ligase/mRNA capping enzyme 306 549 - -
Tan03g0831 682 ProSiteProfiles Dual specificity protein phosphatase domain profile. 113 264 IPR020422 GO:0006470(InterPro)
Tan03g0831 682 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 183 252 IPR000387 GO:0016311(InterPro)
Tan03g0831 682 CDD Adenylation_mRNA_capping 346 552 IPR001339 GO:0004484(InterPro)|GO:0005524(InterPro)|GO:0006370(InterPro)
Tan03g0831 682 Pfam mRNA capping enzyme, C-terminal domain 587 650 IPR013846 -
Tan03g0831 682 Gene3D - 550 659 IPR012340 -
Tan03g0831 682 ProSiteProfiles ATP-dependent DNA ligase family profile. 435 581 IPR012310 GO:0003910(InterPro)|GO:0005524(InterPro)|GO:0006281(InterPro)|GO:0006310(InterPro)
Tan03g0831 682 MobiDBLite consensus disorder prediction 277 315 - -
Tan03g0831 682 FunFam mRNA capping enzyme family protein 550 659 - -
Tan03g0831 682 PANTHER MRNA-CAPPING ENZYME 78 655 IPR051029 GO:0004484(PANTHER)|GO:0006370(PANTHER)
Tan03g0831 682 CDD RNA_5'-triphosphatase 89 255 - -
Tan03g0831 682 SMART dsp_5 120 260 IPR020422 GO:0006470(InterPro)
Tan03g0831 682 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 86 275 IPR029021 -
Tan03g0831 682 SUPERFAMILY Nucleic acid-binding proteins 554 666 IPR012340 -
Tan03g0831 682 MobiDBLite consensus disorder prediction 22 63 - -
Tan03g0831 682 FunFam mRNA capping enzyme family protein 82 296 - -
Tan03g0831 682 ProSitePatterns Tyrosine specific protein phosphatases active site. 205 215 IPR016130 GO:0016311(InterPro)
Tan03g0831 682 FunFam mRNA capping enzyme, putative 312 549 - -
Tan03g0831 682 Pfam Dual specificity phosphatase, catalytic domain 138 258 IPR000340 GO:0016311(InterPro)
Tan03g0831 682 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 313 552 - -
Tan03g0831 682 PIRSF mRNA_capping_HCE 74 682 IPR017074 GO:0004484(InterPro)|GO:0006370(InterPro)|GO:0140818(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0829 Tan-Chr3:64580445 Tan03g0831 Tan-Chr3:64580445 0.00E+00 dispersed
Tan03g0831 Tan-Chr3:64580445 Tan03g0833 Tan-Chr3:64580445 0.00E+00 dispersed
Tan03g0830 Tan-Chr3:64580445 Tan03g0831 Tan-Chr3:64580445 0.00E+00 tandem
Tan03g0831 Tan-Chr3:64580445 Tan03g0832 Tan-Chr3:64580445 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0831 K13917 - csv:101209960 1291.95