Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0834 ATGATTGTTTCCATGGACTTAAATGCCTCGCCGGTGCCCGAAGAGGATGAAGAGACGTTTGAGAGGCATGAAGAGGTGTATAGTGCTCCAGAGGAACATATAGAGTCTGCTGTTAGTATAGCACGGCGGGAGCGAGAAGAAAGAAAAAGGCGGTTGAAAAGAGATCGCTCTATTGAGAGACCAGTGCATGAATACCAACAACCTGCACGGGATCAGTTTTACCCTGCTAAAAACCAAAAAACTGATAGAAACAGGCTTCCCCCAGGTTGGTTGGATTGCCCTGCATTTGGTCAAGAAATATGTTGCATGATTCCTTCCAAGGTTCCTCTGGGTGAATCCTTCAATGATTGCATAACACCTGGTAAAAGATACTCATTTAAACAAGTGATCCATCAGCAGAGAGTTTGGGGAAGGAAACTCGGTTTGGTGATTGATTTGACAAATTCTTACCGTTATTATACAACAACAGATTTGAATAAAGAGGGTATCAAGTATGTTAAGATTCCATGCAAGGGGAGGGATTCTGTACCTGACAACAAGTCAGTCAATATGTTCGTTTACGAGGTCATTCAGTTCCTTTCTCGTCAGAAACATTCAAAGAAGTATATTCTTGTCCACTGCACACATGGCCATAACCGCACTGGATATATGATCATAAATTATCTTGTGCGTGCACTATCCATTTCTGTTACCCAGGCTCTTAAAATGTTTTCTGATGCACGCCCTCCTGGAATTTACAAGCCAGACTACATTGATGCGTTATATGCCTTTTATCATGAAAGAAAACCTGAAGTGGTTGTTTGCCCACCCACGCCTGAGTGGAAGAGATCTTCAGATCTTGATCTTAATGGCGAAGCAGTTCCAGATGATGATGATGATGGAGGTTCTGCTGCTCCTTTGAATGAAAATCATGATGATGGTAATCAAGTGATGACAAATGATGATATATTGGGGGATGAGATACCTGAGGACCAGGAACGTGCTTTGAAACACTTTTGCTATCAAATGCTTAAATTGAATGCTGGAGCAAGAGCAAACTTGCAATTTCCGGGGTCACATCCAGTGTCTCTTAACAGAGACAATCTGCAACTGCTAAGGCAACGGTATTATTATGCCACGTGGAAAGCTGATGGAACAAGATATATGATGCTAATAACCTTGGATGGATGCTACTTGATTGACAGGGGTTTTAAATTTCGAAGAGTCCAAATGAGATTTCCTTACAGAAATGCAAATGATGGCCTAGTTGAGAAGATTCACCACTATACACTACTTGATGGAGAAATGATAATTGATACTATGCCAGACTCGCAGAAGCAGGAGAGAAGATATCTTATCTATGATATGATGGCAATTAATCATGTTTCAGTTATTGAGCGTCCTTTCTATGAACGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTCGCAATTATGAGCGCCAGAATATTTACCAAAGCAGGAATCCTCATTATAGATATGACCTAGAGCCATTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACAGTTACCAAACTTTTGAAGGAGTTCATACCGAGGCTTTCACATGATGCCGATGGTCTAATATTTCAGGGATGGGATGATGCTTATGTTCCTCGAACTCATGAGGGTCTTTTAAAGTGGAAATATCCTGAAATGAACTCAGTCGACTTCCTATTTGAGGTTTTAGGTGAAGATGATTCTCAGATGCTTATTTTGTTCGAACGAGGAAAGAGGAAAACAATGGACGGAAATAGGGTTAAGTTCAAAGATGGCGATCCCTCCTTCTATTCAGGAAAGATTGTTGAGTGTTCTTGGGATTCTGATGAGCAAGTATGGGTCTGCATGCGTATCAGGACAGACAAAACAACTCCTAATGATTTCAATACTTATAAAAAGGTCATGCGCAGTATTAGAGACAATATCACGGAGGAGGATTTGTTGAAGGAGATTCATGAGATCATACGCTTGCCCATGTATGCTGATAGGATAAGGATTGATAGTAAAGCGGCCCAACATACGAATTCAACACGACGGAGGTGA 2049 41.29 MIVSMDLNASPVPEEDEETFERHEEVYSAPEEHIESAVSIARREREERKRRLKRDRSIERPVHEYQQPARDQFYPAKNQKTDRNRLPPGWLDCPAFGQEICCMIPSKVPLGESFNDCITPGKRYSFKQVIHQQRVWGRKLGLVIDLTNSYRYYTTTDLNKEGIKYVKIPCKGRDSVPDNKSVNMFVYEVIQFLSRQKHSKKYILVHCTHGHNRTGYMIINYLVRALSISVTQALKMFSDARPPGIYKPDYIDALYAFYHERKPEVVVCPPTPEWKRSSDLDLNGEAVPDDDDDGGSAAPLNENHDDGNQVMTNDDILGDEIPEDQERALKHFCYQMLKLNAGARANLQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITLDGCYLIDRGFKFRRVQMRFPYRNANDGLVEKIHHYTLLDGEMIIDTMPDSQKQERRYLIYDMMAINHVSVIERPFYERWKMLEKEVIEPRNYERQNIYQSRNPHYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDAYVPRTHEGLLKWKYPEMNSVDFLFEVLGEDDSQMLILFERGKRKTMDGNRVKFKDGDPSFYSGKIVECSWDSDEQVWVCMRIRTDKTTPNDFNTYKKVMRSIRDNITEEDLLKEIHEIIRLPMYADRIRIDSKAAQHTNSTRRR 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 64580445 64597044 - Tan0003133.6 Tan03g0834 746338

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0834 682 MobiDBLite consensus disorder prediction 1 63 - -
Tan03g0834 682 Pfam mRNA capping enzyme, catalytic domain 353 551 IPR001339 GO:0004484(InterPro)|GO:0005524(InterPro)|GO:0006370(InterPro)
Tan03g0834 682 Gene3D Protein tyrosine phosphatase superfamily 82 295 IPR029021 -
Tan03g0834 682 Gene3D DNA ligase/mRNA capping enzyme 306 549 - -
Tan03g0834 682 ProSiteProfiles Dual specificity protein phosphatase domain profile. 113 264 IPR020422 GO:0006470(InterPro)
Tan03g0834 682 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 183 252 IPR000387 GO:0016311(InterPro)
Tan03g0834 682 CDD Adenylation_mRNA_capping 346 552 IPR001339 GO:0004484(InterPro)|GO:0005524(InterPro)|GO:0006370(InterPro)
Tan03g0834 682 Pfam mRNA capping enzyme, C-terminal domain 587 650 IPR013846 -
Tan03g0834 682 Gene3D - 550 659 IPR012340 -
Tan03g0834 682 ProSiteProfiles ATP-dependent DNA ligase family profile. 435 581 IPR012310 GO:0003910(InterPro)|GO:0005524(InterPro)|GO:0006281(InterPro)|GO:0006310(InterPro)
Tan03g0834 682 MobiDBLite consensus disorder prediction 277 315 - -
Tan03g0834 682 FunFam mRNA capping enzyme family protein 550 659 - -
Tan03g0834 682 PANTHER MRNA-CAPPING ENZYME 78 655 IPR051029 GO:0004484(PANTHER)|GO:0006370(PANTHER)
Tan03g0834 682 CDD RNA_5'-triphosphatase 89 255 - -
Tan03g0834 682 SMART dsp_5 120 260 IPR020422 GO:0006470(InterPro)
Tan03g0834 682 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 86 275 IPR029021 -
Tan03g0834 682 SUPERFAMILY Nucleic acid-binding proteins 554 666 IPR012340 -
Tan03g0834 682 MobiDBLite consensus disorder prediction 22 63 - -
Tan03g0834 682 FunFam mRNA capping enzyme family protein 82 296 - -
Tan03g0834 682 ProSitePatterns Tyrosine specific protein phosphatases active site. 205 215 IPR016130 GO:0016311(InterPro)
Tan03g0834 682 FunFam mRNA capping enzyme, putative 312 549 - -
Tan03g0834 682 Pfam Dual specificity phosphatase, catalytic domain 138 258 IPR000340 GO:0016311(InterPro)
Tan03g0834 682 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 313 552 - -
Tan03g0834 682 PIRSF mRNA_capping_HCE 74 682 IPR017074 GO:0004484(InterPro)|GO:0006370(InterPro)|GO:0140818(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0834 K13917 - - csv:101209960 1291.95
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0832 Tan-Chr3:64580445 Tan03g0834 Tan-Chr3:64580445 0.00E+00 dispersed
Tan03g0833 Tan-Chr3:64580445 Tan03g0834 Tan-Chr3:64580445 0.00E+00 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan03g1590 . 33 605 Protein tyrosine phosphatase (PTP) family AT3G50110 60.7 2.2e-188 656.4
Tan03g1575 . 33 457 Protein tyrosine phosphatase (PTP) family AT3G50110 72.1 3.3e-184 642.5
Tan03g1577 . 33 457 Protein tyrosine phosphatase (PTP) family AT3G50110 72.1 3.3e-184 642.5
Tan02g0941 . 19 610 Protein tyrosine phosphatase (PTP) family AT3G50110 57.1 5.9e-181 631.7
Tan03g1576 . 33 482 Protein tyrosine phosphatase (PTP) family AT3G50110 68.1 5.0e-180 628.6
Tan03g1578 . 33 482 Protein tyrosine phosphatase (PTP) family AT3G50110 68.1 5.0e-180 628.6
Tan02g1430 . 9 395 Protein tyrosine phosphatase (PTP) family AT5G39400 64.6 3.3e-148 522.3
Tan11g0955 . 1 854 Protein tyrosine phosphatase (PTP) family AT3G10550 68.6 0.0e+00 1168.3
Tan11g0955 . 1 854 Protein tyrosine phosphatase (PTP) family AT5G04540 66.0 0.0e+00 1114.8
Tan09g1556 . 1 1271 Protein tyrosine phosphatase (PTP) family AT5G58160 54.6 0.0e+00 1093.2
Tan01g3567 . 1 1386 Protein tyrosine phosphatase (PTP) family AT5G58160 50.8 5.5e-303 1038.1
Tan09g1557 . 2 1202 Protein tyrosine phosphatase (PTP) family AT5G58160 53.8 2.5e-287 986.1
Tan01g3002 . 87 393 Protein tyrosine phosphatase (PTP) family AT1G71860 66.1 1.2e-119 427.2
Tan01g3003 . 87 328 Protein tyrosine phosphatase (PTP) family AT1G71860 61.6 8.6e-86 314.7
Tan09g2433 . 13 904 Protein tyrosine phosphatase (PTP) family AT5G23720 64.8 4.3e-313 1071.2
Tan06g2562 . 33 172 Protein tyrosine phosphatase (PTP) family AT3G06110 57.1 2.9e-42 169.1
Tan06g2563 . 33 172 Protein tyrosine phosphatase (PTP) family AT3G06110 57.1 2.9e-42 169.1
Tan02g0125 . 1 166 Protein tyrosine phosphatase (PTP) family AT2G04550 76.9 3.5e-70 261.9
Tan02g0126 . 1 166 Protein tyrosine phosphatase (PTP) family AT2G04550 76.9 3.5e-70 261.9
Tan04g0664 . 96 376 Protein tyrosine phosphatase (PTP) family AT3G52180 70.5 8.7e-116 414.1
Tan04g1399 . 4 282 Protein tyrosine phosphatase (PTP) family AT3G10940 68.0 3.8e-111 398.7
Tan04g1400 . 4 282 Protein tyrosine phosphatase (PTP) family AT3G10940 68.0 3.8e-111 398.7
Tan07g1359 . 141 589 Protein tyrosine phosphatase (PTP) family AT3G01510 73.9 7.6e-207 717.2
Tan05g0689 . 9 210 Protein tyrosine phosphatase (PTP) family AT2G32960 59.9 2.6e-74 276.2
Tan05g0690 . 9 210 Protein tyrosine phosphatase (PTP) family AT2G32960 59.9 2.6e-74 276.2
Tan02g0134 . 1 241 Protein tyrosine phosphatase (PTP) family AT2G32960 56.0 6.3e-73 271.6
Tan02g0133 . 1 211 Protein tyrosine phosphatase (PTP) family AT2G32960 55.3 1.6e-71 266.9
Tan09g0602 . 14 170 Protein tyrosine phosphatase (PTP) family AT2G32960 50.8 2.8e-52 203.0
Tan05g0691 . 9 151 Protein tyrosine phosphatase (PTP) family AT2G32960 53.4 9.9e-42 167.9
Tan05g0692 . 9 151 Protein tyrosine phosphatase (PTP) family AT2G32960 53.4 9.9e-42 167.9
Tan01g2070 . 1 333 Protein tyrosine phosphatase (PTP) family AT2G35680 56.8 1.7e-102 370.2
Tan08g0099 . 12 263 Protein tyrosine phosphatase (PTP) family AT2G35680 54.0 1.2e-79 294.3
Tan08g0100 . 12 263 Protein tyrosine phosphatase (PTP) family AT2G35680 54.0 1.2e-79 294.3
Tan08g0101 . 12 263 Protein tyrosine phosphatase (PTP) family AT2G35680 54.0 1.2e-79 294.3
Tan08g0102 . 12 195 Protein tyrosine phosphatase (PTP) family AT2G35680 70.7 2.3e-75 280.0
Tan08g0102 . 27 198 Protein tyrosine phosphatase (PTP) family AT5G56610 52.9 2.2e-43 172.9
Tan01g2070 . 37 209 Protein tyrosine phosphatase (PTP) family AT5G56610 50.9 1.4e-42 170.2
Tan05g0689 . 43 211 Protein tyrosine phosphatase (PTP) family AT4G03960 78.1 1.5e-77 286.6
Tan05g0690 . 43 211 Protein tyrosine phosphatase (PTP) family AT4G03960 78.1 1.5e-77 286.6
Tan02g0133 . 42 211 Protein tyrosine phosphatase (PTP) family AT4G03960 75.9 1.8e-75 279.6
Tan02g0134 . 42 241 Protein tyrosine phosphatase (PTP) family AT4G03960 64.5 1.0e-70 263.8
Tan09g0602 . 12 183 Protein tyrosine phosphatase (PTP) family AT4G03960 57.0 2.7e-55 212.6
Tan05g0691 . 43 151 Protein tyrosine phosphatase (PTP) family AT4G03960 72.5 9.0e-43 171.0
Tan05g0692 . 43 151 Protein tyrosine phosphatase (PTP) family AT4G03960 72.5 9.0e-43 171.0
Tan09g0602 . 12 196 Protein tyrosine phosphatase (PTP) family AT3G02800 71.9 2.3e-78 289.3
Tan05g0689 . 40 206 Protein tyrosine phosphatase (PTP) family AT3G02800 61.1 1.5e-56 216.9
Tan05g0690 . 40 206 Protein tyrosine phosphatase (PTP) family AT3G02800 61.1 1.5e-56 216.9
Tan02g0133 . 47 200 Protein tyrosine phosphatase (PTP) family AT3G02800 61.0 8.0e-55 211.1
Tan02g0134 . 47 230 Protein tyrosine phosphatase (PTP) family AT3G02800 51.1 4.6e-50 195.3
Tan04g0328 . 1 188 Protein tyrosine phosphatase (PTP) family AT3G55270 65.6 1.4e-62 238.8
Tan04g0329 . 1 188 Protein tyrosine phosphatase (PTP) family AT3G55270 65.6 1.4e-62 238.8
Tan04g0330 . 1 188 Protein tyrosine phosphatase (PTP) family AT3G55270 65.6 1.4e-62 238.8
Tan04g0331 . 1 188 Protein tyrosine phosphatase (PTP) family AT3G55270 65.6 1.4e-62 238.8
Tan02g1430 . 9 395 Protein tyrosine phosphatase (PTP) family AT5G39400 64.6 3.3e-148 522.3
Tan02g0941 . 31 610 Protein tyrosine phosphatase (PTP) family AT3G19420 66.2 1.4e-219 760.0
Tan03g1590 . 31 605 Protein tyrosine phosphatase (PTP) family AT3G19420 62.7 2.6e-197 686.0
Tan03g1575 . 31 454 Protein tyrosine phosphatase (PTP) family AT3G19420 73.4 2.3e-190 662.9
Tan03g1577 . 31 454 Protein tyrosine phosphatase (PTP) family AT3G19420 73.4 2.3e-190 662.9
Tan03g1576 . 31 479 Protein tyrosine phosphatase (PTP) family AT3G19420 69.3 3.5e-186 649.0
Tan03g1578 . 31 479 Protein tyrosine phosphatase (PTP) family AT3G19420 69.3 3.5e-186 649.0
Tan03g1590 . 33 605 Protein tyrosine phosphatase (PTP) family AT3G50110 60.7 2.2e-188 656.4
Tan03g1575 . 33 457 Protein tyrosine phosphatase (PTP) family AT3G50110 72.1 3.3e-184 642.5
Tan03g1577 . 33 457 Protein tyrosine phosphatase (PTP) family AT3G50110 72.1 3.3e-184 642.5
Tan02g0941 . 19 610 Protein tyrosine phosphatase (PTP) family AT3G50110 57.1 5.9e-181 631.7
Tan03g1576 . 33 482 Protein tyrosine phosphatase (PTP) family AT3G50110 68.1 5.0e-180 628.6
Tan03g1578 . 33 482 Protein tyrosine phosphatase (PTP) family AT3G50110 68.1 5.0e-180 628.6
Tan09g1556 . 1 1271 Protein tyrosine phosphatase (PTP) family AT5G58160 54.6 0.0e+00 1093.2
Tan01g3567 . 1 1386 Protein tyrosine phosphatase (PTP) family AT5G58160 50.8 5.5e-303 1038.1
Tan09g1557 . 2 1202 Protein tyrosine phosphatase (PTP) family AT5G58160 53.8 2.5e-287 986.1
Tan11g0955 . 1 854 Protein tyrosine phosphatase (PTP) family AT3G10550 68.6 0.0e+00 1168.3
Tan11g0955 . 1 854 Protein tyrosine phosphatase (PTP) family AT5G04540 66.0 0.0e+00 1114.8
Tan05g0144 . 42 247 Protein tyrosine phosphatase (PTP) family AT3G44620 57.9 3.3e-69 259.2
Tan01g2161 . 22 318 Protein tyrosine phosphatase (PTP) family AT2G35320 63.3 1.2e-110 397.1
Tan03g0829 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0830 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0831 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0832 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0833 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0834 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0829 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0830 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0831 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0832 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0833 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0834 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0829 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
Tan03g0830 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
Tan03g0831 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
Tan03g0832 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
Tan03g0833 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
Tan03g0834 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6