Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0860 ATGGGGGAAGAATTGCAGGTGTTTGGTTTCTGGGCAAGTCCCTTCAGTCGCAGAGTGGAGTTGGCTCTCAAACTCAAAGGCGTCGATTACCAATACATTGAGGAAGATTTGCCCAACAAGAAGAGCGATTTGCTTCTGAAATACAACCCAATTTACAAGAAGGTTCCTGTTCTCCTTCACCATGGAAAACCCATCGTAGAGTCTGTTCTCATCCTCGAATATATTGATGAAAACTGGAAGCACAACCCCATCTTGCCTGAAGATTCCCATGAAAGAGCTCTTGCGAGATTCTGGGCCAAGTATATTGATGACAAGGTTTTATCTGCAGTACTGAAACCTGCTCGAAGAAGTAAAGGAGAAGATAGAGAAAAGGGTTTAGAAGAAGCAGAGGAAAGGTTAGAACCACTTGAGAAAGAGCTCAAAAACAAGAGGTTTTTTGGAGGACAGAAAATTGGGTTTTTGGACATTGTTGCCATTCCCATAGCTTACTGGGTTCCTGTCATTGAACAAGGTTTTGGGTTTGAGCTTCTCAAAAGTAACAAATTTCCAAACTTAAGCAAATGGAGTGAAGACCTCAACAATCACAGCGTGGTCAACCAAATTCTGGCTCCAAAACATAAGCTTGTTGCCCATATGCAAGCTGTTCTTTGA 651 42.4 MGEELQVFGFWASPFSRRVELALKLKGVDYQYIEEDLPNKKSDLLLKYNPIYKKVPVLLHHGKPIVESVLILEYIDENWKHNPILPEDSHERALARFWAKYIDDKVLSAVLKPARRSKGEDREKGLEEAEERLEPLEKELKNKRFFGGQKIGFLDIVAIPIAYWVPVIEQGFGFELLKSNKFPNLSKWSEDLNNHSVVNQILAPKHKLVAHMQAVL 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 64796066 64796789 + Tan0005307.1 Tan03g0860 746364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0860 216 CDD GST_N_Tau 5 79 - -
Tan03g0860 216 FunFam Tau class glutathione S-transferase 1 87 - -
Tan03g0860 216 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Tan03g0860 216 SUPERFAMILY GST C-terminal domain-like 77 214 IPR036282 -
Tan03g0860 216 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 213 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Tan03g0860 216 CDD GST_C_Tau 90 214 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Tan03g0860 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Tan03g0860 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Tan03g0860 216 FunFam Tau class glutathione S-transferase 85 216 - -
Tan03g0860 216 Pfam Glutathione S-transferase, C-terminal domain 98 194 IPR004046 -
Tan03g0860 216 Gene3D Glutaredoxin 1 87 - -
Tan03g0860 216 SFLD Main.3: Omega- and Tau-like 2 214 IPR045073 -
Tan03g0860 216 Gene3D - 88 216 - -
Tan03g0860 216 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
Tan03g0860 216 SFLD Main (cytGST) 2 214 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0860 Tan-Chr3:64796066 Tan03g0877 Tan-Chr3:64971320 4.80E-90 dispersed
Tan03g0860 Tan-Chr3:64796066 Tan03g0861 Tan-Chr3:64817028 2.40E-86 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0860 K00799 - csv:105434443 273.092