Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0861 ATGGCGGAAGAACTGCAGGTCTTCGGTTTCTGGGAAAGTGCCTTCAGTCGCAGAGTGGAGCTGGCTCTCAAACTCAAAGGCGTCGAAGAATACCAATACATTGAAGAAGATCTTCCCTTCAACAAGAGCGATTTGCTTCTGAAATATAACCCAATTTACAAGAAAGTGCCTGTTCTCGTCCACCATGGAAAACCCATCGCAGAGTCTCTTATCATCCTCGAATACATCGATGAAAAATGGAAAACCAACCCCATCTTGCCCCAACATCCCCATGAAAGAGCTCAAGCAAGGTTCTGGGCTAAGTTTATTGACGACAAGGTAGTGTCTGCAGTACTGAAGGCTGCTGGAAGCAAAGGAGAAGAGAGAGAGAAGGGTGTAGAAGAAGCAGGGGAGGCATTAGAAGCACTTGAGAAAGAGCTTAAAAGCAGAGGCAAGTTCTTCGGAGGAGAAAGAATTGGGTTTGTGGACATTGTTGCCACTGTCGTAGCTCATTGGGTTCCTGCCATTGAAGACAGTTTTGGGTTTGAGCTGCTCACAATTAACAAGTTTCCTAATTTAATCAAATGGAGTGAAGAGCTTGTGAATCATAGCGTACTGAAGGAGTTTCTCCCTCCAAAACAGGACATTGTTGCCTTTATTCAAGCTAATTGGAATTTTCAAAACTAG 666 44.29 MAEELQVFGFWESAFSRRVELALKLKGVEEYQYIEEDLPFNKSDLLLKYNPIYKKVPVLVHHGKPIAESLIILEYIDEKWKTNPILPQHPHERAQARFWAKFIDDKVVSAVLKAAGSKGEEREKGVEEAGEALEALEKELKSRGKFFGGERIGFVDIVATVVAHWVPAIEDSFGFELLTINKFPNLIKWSEELVNHSVLKEFLPPKQDIVAFIQANWNFQN 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 64817028 64817943 + Tan0000778.1 Tan03g0861 746365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0861 221 SUPERFAMILY GST C-terminal domain-like 78 216 IPR036282 -
Tan03g0861 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 214 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Tan03g0861 221 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Tan03g0861 221 Pfam Glutathione S-transferase, C-terminal domain 99 195 IPR004046 -
Tan03g0861 221 FunFam Tau class glutathione S-transferase 86 219 - -
Tan03g0861 221 SFLD Glutathione Transferase (cytosolic) 2 215 IPR040079 -
Tan03g0861 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 212 IPR010987 -
Tan03g0861 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Tan03g0861 221 FunFam Tau class glutathione S-transferase 1 88 - -
Tan03g0861 221 CDD GST_N_Tau 5 80 - -
Tan03g0861 221 CDD GST_C_Tau 90 215 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Tan03g0861 221 Gene3D Glutaredoxin 1 85 - -
Tan03g0861 221 SFLD Main.3: Omega- and Tau-like 2 215 IPR045073 -
Tan03g0861 221 Gene3D - 86 220 - -
Tan03g0861 221 Pfam Glutathione S-transferase, N-terminal domain 4 78 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0861 Tan-Chr3:64817028 Tan03g0877 Tan-Chr3:64971320 1.70E-90 dispersed
Tan03g0860 Tan-Chr3:64796066 Tan03g0861 Tan-Chr3:64817028 2.40E-86 tandem
Tan03g0861 Tan-Chr3:64817028 Tan03g0862 Tan-Chr3:64824977 7.90E-48 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0861 K00799 - csv:105435246 322.783