Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0873 ATGGCGGAGGAACTGCAGGTGTTTGGTTTCCGGTCAGGCTCCTTCAGTCTCAGAGTGGAGATGGCTCTCAAACTCAAAGGAGTTGATTACCAACACATTGACGAAGATTTGATGAACAAGAAGAGCGATTTGCTTCTCAAATACAATCCAATTTACAAGAAGGTTCCTGTCCTTGTCCACCATGGCAAGCCCATTTCAGAGTCTCTCGTCATCCTCGAATACATCGAAGAAACTTGGAGACACAACCCAATCTTCCCAGAAGATCCCCATGAGAGAGCTCTTGCGAGGTTTTGGGCCAAGTATATCGATGACAAGGTTCTGCCTGGGATGTATAAAATTGCTCAAAGCAAAGATAAAGAGAGAGAAAAGGCAATAGAAGAAGTGCAGGAGACATTGGAACCACTTGAGAAAGAGCTAAAAAACAAGAAGTTCTTCGGAGGAGAGAAAATTGGGTTTTTGGACATTGTTGGCCTGGGTTTAGCCTGCTGGATTCCAGCCTCTGAAGAAGTTTTAGGCTTTGAACTGGTAACAAGCCACAAGTTCCCAAACTTTAAAACATGGAGCCAAGAGTTTGTGAACCATAGTGTCGCGAAGGAGGTTCTGCCTCAAAAAGATGCGCTTGTTGCCTTTTTGAAAAAGGCTTGGGATCAATAA 654 44.19 MAEELQVFGFRSGSFSLRVEMALKLKGVDYQHIDEDLMNKKSDLLLKYNPIYKKVPVLVHHGKPISESLVILEYIEETWRHNPIFPEDPHERALARFWAKYIDDKVLPGMYKIAQSKDKEREKAIEEVQETLEPLEKELKNKKFFGGEKIGFLDIVGLGLACWIPASEEVLGFELVTSHKFPNFKTWSQEFVNHSVAKEVLPQKDALVAFLKKAWDQ 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 64946042 64947545 - Tan0005374.1 Tan03g0873 746377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0873 217 FunFam Tau class glutathione S-transferase 85 217 - -
Tan03g0873 217 Pfam Glutathione S-transferase, C-terminal domain 98 193 IPR004046 -
Tan03g0873 217 SFLD Main.3: Omega- and Tau-like 2 213 IPR045073 -
Tan03g0873 217 CDD GST_N_Tau 5 79 - -
Tan03g0873 217 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
Tan03g0873 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Tan03g0873 217 Gene3D - 85 216 - -
Tan03g0873 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 215 IPR010987 -
Tan03g0873 217 CDD GST_C_Tau 89 213 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Tan03g0873 217 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Tan03g0873 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 213 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Tan03g0873 217 Gene3D Glutaredoxin 1 84 - -
Tan03g0873 217 FunFam Glutathione S-transferase GSTU6 1 85 - -
Tan03g0873 217 SFLD Main (cytGST) 2 213 - -
Tan03g0873 217 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0873 Tan-Chr3:64946042 Tan03g0877 Tan-Chr3:64971320 2.00E-88 dispersed
Tan03g0873 Tan-Chr3:64946042 Tan03g0874 Tan-Chr3:64957805 6.70E-108 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0873 K00799 - csv:101215228 318.546