Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g0873 | ATGGCGGAGGAACTGCAGGTGTTTGGTTTCCGGTCAGGCTCCTTCAGTCTCAGAGTGGAGATGGCTCTCAAACTCAAAGGAGTTGATTACCAACACATTGACGAAGATTTGATGAACAAGAAGAGCGATTTGCTTCTCAAATACAATCCAATTTACAAGAAGGTTCCTGTCCTTGTCCACCATGGCAAGCCCATTTCAGAGTCTCTCGTCATCCTCGAATACATCGAAGAAACTTGGAGACACAACCCAATCTTCCCAGAAGATCCCCATGAGAGAGCTCTTGCGAGGTTTTGGGCCAAGTATATCGATGACAAGGTTCTGCCTGGGATGTATAAAATTGCTCAAAGCAAAGATAAAGAGAGAGAAAAGGCAATAGAAGAAGTGCAGGAGACATTGGAACCACTTGAGAAAGAGCTAAAAAACAAGAAGTTCTTCGGAGGAGAGAAAATTGGGTTTTTGGACATTGTTGGCCTGGGTTTAGCCTGCTGGATTCCAGCCTCTGAAGAAGTTTTAGGCTTTGAACTGGTAACAAGCCACAAGTTCCCAAACTTTAAAACATGGAGCCAAGAGTTTGTGAACCATAGTGTCGCGAAGGAGGTTCTGCCTCAAAAAGATGCGCTTGTTGCCTTTTTGAAAAAGGCTTGGGATCAATAA | 654 | 44.19 | MAEELQVFGFRSGSFSLRVEMALKLKGVDYQHIDEDLMNKKSDLLLKYNPIYKKVPVLVHHGKPISESLVILEYIEETWRHNPIFPEDPHERALARFWAKYIDDKVLPGMYKIAQSKDKEREKAIEEVQETLEPLEKELKNKKFFGGEKIGFLDIVGLGLACWIPASEEVLGFELVTSHKFPNFKTWSQEFVNHSVAKEVLPQKDALVAFLKKAWDQ | 217 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 64946042 | 64947545 | - | Tan0005374.1 | Tan03g0873 | 746377 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g0873 | 217 | FunFam | Tau class glutathione S-transferase | 85 | 217 | - | - | |
Tan03g0873 | 217 | Pfam | Glutathione S-transferase, C-terminal domain | 98 | 193 | IPR004046 | - | |
Tan03g0873 | 217 | SFLD | Main.3: Omega- and Tau-like | 2 | 213 | IPR045073 | - | |
Tan03g0873 | 217 | CDD | GST_N_Tau | 5 | 79 | - | - | |
Tan03g0873 | 217 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 77 | IPR004045 | - | |
Tan03g0873 | 217 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 83 | IPR004045 | - | |
Tan03g0873 | 217 | Gene3D | - | 85 | 216 | - | - | |
Tan03g0873 | 217 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 88 | 215 | IPR010987 | - | |
Tan03g0873 | 217 | CDD | GST_C_Tau | 89 | 213 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Tan03g0873 | 217 | SUPERFAMILY | GST C-terminal domain-like | 77 | 215 | IPR036282 | - | |
Tan03g0873 | 217 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 5 | 213 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
Tan03g0873 | 217 | Gene3D | Glutaredoxin | 1 | 84 | - | - | |
Tan03g0873 | 217 | FunFam | Glutathione S-transferase GSTU6 | 1 | 85 | - | - | |
Tan03g0873 | 217 | SFLD | Main (cytGST) | 2 | 213 | - | - | |
Tan03g0873 | 217 | SUPERFAMILY | Thioredoxin-like | 5 | 106 | IPR036249 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g0873 | Tan-Chr3:64946042 | Tan03g0877 | Tan-Chr3:64971320 | 2.00E-88 | dispersed | |
Tan03g0873 | Tan-Chr3:64946042 | Tan03g0874 | Tan-Chr3:64957805 | 6.70E-108 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g0873 | K00799 | - | csv:101215228 | 318.546 |