Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0877 ATGGCGGATCAATTACAGGTGTTTGGTTTCTGGTCAAGTCCCTTTAGTCTCAGAGTGAAGTTGGCTCTCAAACTCAAAGGCGTTGAGTACCAATACATTGAGGAAGATTTGCCCAATAAGAAGAGCGATTTGCTTCTGAAATACAACCCAATTTACAAGAAGGTGCCTGTTCTCGTCCACCATGGAAAACCCATTACAGAGTCTCTTGTCATCCTCGAATACATCGATGAAAACTGGAAAACCCGCCCCATTTTGCCTGAAAATCACCACGAAAGAGCTCAAGCAAGGTTCTGGGCTAAGTATATCGATGACAAGGTTCTGTCTGCAGTACTGAAAGCAGCTCGAAGTAAAGGAGATGAGAGAGAGAAGAGCGTAGAAGAAGCACGAGAGACGTTGGAACCACTTGAGAAAGAGCTTAAAGACAAGAAGTTCTTCGGAGGAGAGAAAATTGGATTTGTGGACATTGTAGGCATTGTTGTAGCTTGCTGGGTTCCTGCGTTTGAAGAATCTTTAGGGATTGAGCTGCTTAGAACTCAGAAATTTCCGAACCTAACCAAATGGAGTGAAGAGCTTGCGAACCACACTGTCACCAAGAAGCTTCTGCCTCAAAAAGATGTGCTCGTTGCCTTTTTGCAAAGTATTTATCAAAAAAATTAG 657 43.23 MADQLQVFGFWSSPFSLRVKLALKLKGVEYQYIEEDLPNKKSDLLLKYNPIYKKVPVLVHHGKPITESLVILEYIDENWKTRPILPENHHERAQARFWAKYIDDKVLSAVLKAARSKGDEREKSVEEARETLEPLEKELKDKKFFGGEKIGFVDIVGIVVACWVPAFEESLGIELLRTQKFPNLTKWSEELANHTVTKKLLPQKDVLVAFLQSIYQKN 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 64971320 64973275 - Tan0009722.1 Tan03g0877 746381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0877 218 CDD GST_N_Tau 5 79 - -
Tan03g0877 218 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
Tan03g0877 218 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Tan03g0877 218 FunFam Tau class glutathione S-transferase 85 218 - -
Tan03g0877 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Tan03g0877 218 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Tan03g0877 218 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Tan03g0877 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 218 IPR010987 -
Tan03g0877 218 FunFam Tau class glutathione S-transferase 1 87 - -
Tan03g0877 218 CDD GST_C_Tau 90 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Tan03g0877 218 Pfam Glutathione S-transferase, C-terminal domain 97 193 IPR004046 -
Tan03g0877 218 Gene3D - 85 218 - -
Tan03g0877 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 212 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Tan03g0877 218 SFLD Glutathione Transferase (cytosolic) 2 216 IPR040079 -
Tan03g0877 218 Gene3D Glutaredoxin 1 84 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0860 Tan-Chr3:64796066 Tan03g0877 Tan-Chr3:64971320 4.80E-90 dispersed
Tan03g0861 Tan-Chr3:64817028 Tan03g0877 Tan-Chr3:64971320 1.70E-90 dispersed
Tan03g0873 Tan-Chr3:64946042 Tan03g0877 Tan-Chr3:64971320 2.00E-88 dispersed
Tan03g0874 Tan-Chr3:64957805 Tan03g0877 Tan-Chr3:64971320 3.40E-91 dispersed
Tan03g0877 Tan-Chr3:64971320 Tan03g0879 Tan-Chr3:64986299 2.60E-75 dispersed
Tan03g0877 Tan-Chr3:64971320 Tan03g0878 Tan-Chr3:64978901 4.80E-90 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0877 K00799 - csv:101215228 291.197