Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g0879 | ATGAAGGTGAACTGGATCATAAATTACCAGAAGGACTTGGCTGAAGCTCATGGATCCATGACAGAACTTTCAGATCAAGCAACTCAACTAGCTTTAAAAGAAATGACTGAAGGACTGCAGGTCCTTGGTTCGTGGTTAAGTCCTTTTAGTCGACGTGTGGAGTTGGCTCTCAAACTCAAAGCCCTAAGATACTTATATGTTGAGGAAAACTTGACCAACAAGAGCCATTTGGTTGTGAAATACAACCCAGTTTACAAGAAGGTGCCTGTCCTCGTCCACAATGGCAAACCCATTGTAGAGTCTCTTGTCATCCTCGAATACATCGATGAAATTTGGAAAACCAACCCCATCTTGCCCCAACATCCCCTTCAAAGAGCTCAAGCAAGATTCTGGGCTAAATATATCGATGACAAGTTTTTTTCTTTGTGGCGGAAAGCTGTTCGAAGTCAAAGAGAAGAGCGAGAGAAAGCTATAGAGGAAGCGTGTAAGGCGTTGGAACCACTTGAGAATGAGCTTAAAAGCAACAAATTCTTTGGCGGAGAAAGCATTGGATTGGTGGACATTGCTGGCATCTTCATTGGCTACTGGGTTCCTATCATGCAACAAGCTCTTGGGTTTGAGATTCTCAGCAGCCATAGGTTTCCAAAACTAACCAAATGGAGTGAAGAGCTTGTAAGCCACAGCGTTGTGAAGGAGATTCTTCCTTCAAAAGATGGCCTTTTTGCTTATGCTCTAACTCTTTCTAAAAGAAATGGGGCTTCTAAGTTGTGA | 771 | 42.93 | MKVNWIINYQKDLAEAHGSMTELSDQATQLALKEMTEGLQVLGSWLSPFSRRVELALKLKALRYLYVEENLTNKSHLVVKYNPVYKKVPVLVHNGKPIVESLVILEYIDEIWKTNPILPQHPLQRAQARFWAKYIDDKFFSLWRKAVRSQREEREKAIEEACKALEPLENELKSNKFFGGESIGLVDIAGIFIGYWVPIMQQALGFEILSSHRFPKLTKWSEELVSHSVVKEILPSKDGLFAYALTLSKRNGASKL | 256 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 64986299 | 64995332 | - | Tan0020692.1 | Tan03g0879 | 746383 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g0879 | 256 | SUPERFAMILY | GST C-terminal domain-like | 110 | 248 | IPR036282 | - | |
Tan03g0879 | 256 | SFLD | Glutathione Transferase (cytosolic) | 35 | 251 | IPR040079 | - | |
Tan03g0879 | 256 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 37 | 116 | IPR004045 | - | |
Tan03g0879 | 256 | SFLD | Main.3: Omega- and Tau-like | 35 | 251 | IPR045073 | - | |
Tan03g0879 | 256 | Gene3D | Glutaredoxin | 32 | 117 | - | - | |
Tan03g0879 | 256 | Coils | Coil | 151 | 171 | - | - | |
Tan03g0879 | 256 | Gene3D | - | 118 | 255 | - | - | |
Tan03g0879 | 256 | FunFam | Tau class glutathione S-transferase | 118 | 253 | - | - | |
Tan03g0879 | 256 | FunFam | Tau class glutathione S-transferase | 34 | 120 | - | - | |
Tan03g0879 | 256 | Pfam | Glutathione S-transferase, C-terminal domain | 130 | 226 | IPR004046 | - | |
Tan03g0879 | 256 | CDD | GST_N_Tau | 39 | 112 | - | - | |
Tan03g0879 | 256 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 40 | 243 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
Tan03g0879 | 256 | SUPERFAMILY | Thioredoxin-like | 41 | 140 | IPR036249 | - | |
Tan03g0879 | 256 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 121 | 245 | IPR010987 | - | |
Tan03g0879 | 256 | CDD | GST_C_Tau | 122 | 247 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Tan03g0879 | 256 | Pfam | Glutathione S-transferase, N-terminal domain | 39 | 110 | IPR004045 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g0877 | Tan-Chr3:64971320 | Tan03g0879 | Tan-Chr3:64986299 | 2.60E-75 | dispersed | |
Tan03g0879 | Tan-Chr3:64986299 | Tan10g0407 | Tan-Chr10:3273542 | 7.20E-53 | dispersed | |
Tan03g0878 | Tan-Chr3:64978901 | Tan03g0879 | Tan-Chr3:64986299 | 3.20E-73 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g0879 | K00799 | - | vvi:100242547 | 258.455 |