Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0879 ATGAAGGTGAACTGGATCATAAATTACCAGAAGGACTTGGCTGAAGCTCATGGATCCATGACAGAACTTTCAGATCAAGCAACTCAACTAGCTTTAAAAGAAATGACTGAAGGACTGCAGGTCCTTGGTTCGTGGTTAAGTCCTTTTAGTCGACGTGTGGAGTTGGCTCTCAAACTCAAAGCCCTAAGATACTTATATGTTGAGGAAAACTTGACCAACAAGAGCCATTTGGTTGTGAAATACAACCCAGTTTACAAGAAGGTGCCTGTCCTCGTCCACAATGGCAAACCCATTGTAGAGTCTCTTGTCATCCTCGAATACATCGATGAAATTTGGAAAACCAACCCCATCTTGCCCCAACATCCCCTTCAAAGAGCTCAAGCAAGATTCTGGGCTAAATATATCGATGACAAGTTTTTTTCTTTGTGGCGGAAAGCTGTTCGAAGTCAAAGAGAAGAGCGAGAGAAAGCTATAGAGGAAGCGTGTAAGGCGTTGGAACCACTTGAGAATGAGCTTAAAAGCAACAAATTCTTTGGCGGAGAAAGCATTGGATTGGTGGACATTGCTGGCATCTTCATTGGCTACTGGGTTCCTATCATGCAACAAGCTCTTGGGTTTGAGATTCTCAGCAGCCATAGGTTTCCAAAACTAACCAAATGGAGTGAAGAGCTTGTAAGCCACAGCGTTGTGAAGGAGATTCTTCCTTCAAAAGATGGCCTTTTTGCTTATGCTCTAACTCTTTCTAAAAGAAATGGGGCTTCTAAGTTGTGA 771 42.93 MKVNWIINYQKDLAEAHGSMTELSDQATQLALKEMTEGLQVLGSWLSPFSRRVELALKLKALRYLYVEENLTNKSHLVVKYNPVYKKVPVLVHNGKPIVESLVILEYIDEIWKTNPILPQHPLQRAQARFWAKYIDDKFFSLWRKAVRSQREEREKAIEEACKALEPLENELKSNKFFGGESIGLVDIAGIFIGYWVPIMQQALGFEILSSHRFPKLTKWSEELVSHSVVKEILPSKDGLFAYALTLSKRNGASKL 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 64986299 64995332 - Tan0020692.1 Tan03g0879 746383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0879 256 SUPERFAMILY GST C-terminal domain-like 110 248 IPR036282 -
Tan03g0879 256 SFLD Glutathione Transferase (cytosolic) 35 251 IPR040079 -
Tan03g0879 256 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 37 116 IPR004045 -
Tan03g0879 256 SFLD Main.3: Omega- and Tau-like 35 251 IPR045073 -
Tan03g0879 256 Gene3D Glutaredoxin 32 117 - -
Tan03g0879 256 Coils Coil 151 171 - -
Tan03g0879 256 Gene3D - 118 255 - -
Tan03g0879 256 FunFam Tau class glutathione S-transferase 118 253 - -
Tan03g0879 256 FunFam Tau class glutathione S-transferase 34 120 - -
Tan03g0879 256 Pfam Glutathione S-transferase, C-terminal domain 130 226 IPR004046 -
Tan03g0879 256 CDD GST_N_Tau 39 112 - -
Tan03g0879 256 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 40 243 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Tan03g0879 256 SUPERFAMILY Thioredoxin-like 41 140 IPR036249 -
Tan03g0879 256 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 121 245 IPR010987 -
Tan03g0879 256 CDD GST_C_Tau 122 247 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Tan03g0879 256 Pfam Glutathione S-transferase, N-terminal domain 39 110 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0877 Tan-Chr3:64971320 Tan03g0879 Tan-Chr3:64986299 2.60E-75 dispersed
Tan03g0879 Tan-Chr3:64986299 Tan10g0407 Tan-Chr10:3273542 7.20E-53 dispersed
Tan03g0878 Tan-Chr3:64978901 Tan03g0879 Tan-Chr3:64986299 3.20E-73 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0879 K00799 - vvi:100242547 258.455