Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0894 ATGGCGGAGGGTTTTGAAGTCTACCATGTCCCACAGCAAAGCAGGAGAGATAAGCTTCGAGTGGGAATTGGCAATAGTCATAATACCAATAATAATAATAATAATAATAATAATAATTTTCATATCGCTGCTAATTTGCTTTCTTTATATGATCCTTCTTCTTTAATCTCCTCCGATTTTGATTTCCACCCACTTCCTCAAAATCCCTCTTTTCAACTTCTTCATCATCATCATAATGTTCATAATAATTACCCTCCTCTCACCGCCGCCGACCATGTCCCTCCCCTCCTCCCCGACCAACCCTTGTCTCTCGAGCTCAACCTCCAGCAGCGCTACGCCTCTGCGGCGGCGGTTTTTTCTCCTCACGATTCTGCCCTCCCTCTTGTTGGCTACTCATCCTCCGTTCTCAAGGGCTCCAAATTCTTGAAGCCGGCTCAGCAGCTGCTCGACGACCTCTTTGACTACGCCGCTCCTACCCCCGACAAGTTGCCGCCGGATTCCGCCCTTGTCGACCCCCTTCTTCAAAGCTTGGGCGGTGATATTCCCGCCGCCGATCACGATCCCATTACCTCTGCCGACGACGGAGCTGACACCCGGAGGAAGAAATCTCGGCTTATTACCATGCTCGACGAGGTTTCCAAAAGATATAAGCTTTACTATCAACAAATGCAAGCGGTGGTTACAACATTTGAGTACGCTGCAGGGCTTGGCAATGCAGCTCCCTACGTGAACTTAGCCGTAAAAGCCATGTTTAAGCACTTCAGGTTCTTAAAAAACGCCATTGCCGACCAGCTCCAATTCAACAAGCAGCACCAGCAGCCTTACAATCCATATTGCCCAAGATCCATTCACAACAACAATAATGCCGCATTCCTCGACCACCAACCCGTCTGGCGCCCGCAGAGGGGCCTCCCCGAGAGCGCCGTTACCATCCTTCGGGCTTGGCTCTTCGAACACTTCCTCCATCCTTATCCTACCGACACAGACAAGCTCATGTTGGCCAACCAAACCGGTCTCTCTAGAAGCCAGGTATCAAACTGGTTCATCAATGCAAGAGTGAGGCTTTGGAAGCCAATGGTGGAAGAAATCCACATGCTAGAAACAAGGCAAGCTCAGAAATCTCAGCAGAGGGAAGCCAATAATGGAAATGTCTTAAACAACGATCATCTTTCATCTACAAACGAATCATTGAAAGCCGAGCACAACAACAACAACGATAACCATGCATCTTCTTCAAATCACGATCACCACCCACTGAACTTGTCCAACTCCAATTTCTTTCCGACCCACCACCCTCATGCGGCGGCCGGAGCCGCAGCCGCGGCTATGGTCGGCGGCAATGTTTCTTTAACTCTTGGGCTCCACCAGAACCACGGCGGGATCACTCTCACGGAGCCGTTTCCTATCAATGCAGCTCAGCATTTTAACCTTGGGCTAGAAGCCAATGGTGAAGGGTTTGTAAATGAGTGGTTTTGA 1476 49.46 MAEGFEVYHVPQQSRRDKLRVGIGNSHNTNNNNNNNNNNFHIAANLLSLYDPSSLISSDFDFHPLPQNPSFQLLHHHHNVHNNYPPLTAADHVPPLLPDQPLSLELNLQQRYASAAAVFSPHDSALPLVGYSSSVLKGSKFLKPAQQLLDDLFDYAAPTPDKLPPDSALVDPLLQSLGGDIPAADHDPITSADDGADTRRKKSRLITMLDEVSKRYKLYYQQMQAVVTTFEYAAGLGNAAPYVNLAVKAMFKHFRFLKNAIADQLQFNKQHQQPYNPYCPRSIHNNNNAAFLDHQPVWRPQRGLPESAVTILRAWLFEHFLHPYPTDTDKLMLANQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQAQKSQQREANNGNVLNNDHLSSTNESLKAEHNNNNDNHASSSNHDHHPLNLSNSNFFPTHHPHAAAGAAAAAMVGGNVSLTLGLHQNHGGITLTEPFPINAAQHFNLGLEANGEGFVNEWF 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 65173577 65177607 + Tan0010241.1 Tan03g0894 746398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0894 491 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 85 398 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Tan03g0894 491 SMART HOX_1 298 362 IPR001356 GO:0003677(InterPro)
Tan03g0894 491 Pfam Homeobox KN domain 315 354 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Tan03g0894 491 MobiDBLite consensus disorder prediction 371 390 - -
Tan03g0894 491 FunFam BEL1-like homeodomain protein 9 301 363 - -
Tan03g0894 491 SMART prehox3 129 263 IPR006563 -
Tan03g0894 491 Pfam Associated with HOX 135 262 IPR006563 -
Tan03g0894 491 SUPERFAMILY Homeodomain-like 300 365 IPR009057 -
Tan03g0894 491 Gene3D - 301 363 - -
Tan03g0894 491 ProSiteProfiles 'Homeobox' domain profile. 295 358 IPR001356 GO:0003677(InterPro)
Tan03g0894 491 MobiDBLite consensus disorder prediction 395 428 - -
Tan03g0894 491 CDD homeodomain 298 359 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0894 Tan-Chr3:65173577 Tan05g0081 Tan-Chr5:745653 3.40E-51 dispersed
Tan03g0894 Tan-Chr3:65173577 Tan08g2046 Tan-Chr8:72568008 1.20E-96 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26925 PF07526 POX 3.80E-33 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0894 - - - 0.0