Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0923 ATGGAAACCAATCTTTCCCTTCTCATTTTACTCTCACTCTTCCTTTGTTGCCCGGCCAAGCGCTGCCCAGACTGCGGCCGCACGCCGGTGCCGTACCCACTCAGCACACGCCCGGACTGTGGCGACCCTCTATACAGAGTCCGGTGCATCGCCGGCGTGCTCTGGTTCGAGTCCCTCAATGGGTCTTCCTATTTGATCACATCCGTTAATCCGGTGTCTCAGAGGCTGATCGTCCGGCCGCCAGGGTTGGCCAAAAACGCCTGCGTTTCGTCCGATTTTGGGAACCATGGATTTTGGCTCGACACTGGCCTTCCTTTCACCATTACCAATAGAAACACGGTTCTGCTCTTCAACTGTTCCATGGAAGTCCTCGAAAATAATTGGAACTGTTCGCCAAATAGCGTCTGTCATGACTTCATCCGGCAGAATCCGGTGACCATGGCGGCGTGTAAGGCGGCGCCGACGTGCTGTTGGTATAAAGGTGGAGGCTCCACTGAGTATAGGTTCAGGGTGTGGAAGGAGCGGTGTTCGGCTTATGAATGTTTTGTGAATTTGGGTGGTTCTGTTCCGGCGAAGAAGTGGCCGGAACCTGGGGTGGAGATTCAATGGGCACAGCCGCGAGAGCCGCAGTGTCGACTGGCTGCGGACTGCCGGAATTGGGAGAATTCTGCTTGTTTACCGGACCCTGCAAATGCTCGCCAGAGAAGGTGCTTCTGCAAGGTGCCTTTCAAGTGGGATCCTGTTAATGGCTTGTGTAATGGCAACAATGTGAAAATACAGAGCAAGAGAACTCACAAGAAGCATAAGAAGATGCCTGCTATTCTTGGAGCAATGGCGGGAGTAATCGTCATGATGATTGGAGGTTCGACCATATTTATAGTTTTCAAAAGACGTCAACAGATTCCGAAAGGGAACGAACTCAGTTCGAAACAAGTTCGTGAAGTGATTCTAAGTGCTAACAGCAGTGGCAAATCGGCAAGGATGTTCACAACCAAAGAGATAGCAAAGGCTACAAACAACTTCTCGAAAGATAACTTGCTTGGCTCTGGTGGCTATGGGGAGGTCTTCAAAGGCAGCCTAGAAGATGGAACCTTAATAGCTGTTAAGCGCGCCAAGTTGGGGTGCTTGAAGGGTATCGATCAAATCCTGAACGAAGTTCGAATTCTTTGTCAGGTGAACCATCGATGCCTTGTTCGTCTACTTGGATGTTGTCTCGAACTCGAGCAACCCCTGTTAATATATGAGTACATCTCAAACGGGAACCTATTTGATCACCTTCATGGGAATACAAGTCCAAGCAAATGGCCACCGCTGACATTGAGTCGTCGACTCTACATTGCTCACCAAACAGCTGATGGCCTTGCCTATTTACACACTTCAGCCATGCCAAGAATCTATCACCGAGACATAAAGTCAAGCAATATTCTACTAGACGAGAAGTTGAATGCTAAAGTTGCCGATTTCGGGCTTTCTCGATTGGCTGTTACAGAATCAAGCCATATTACCACTGGGGCTCAAGGAACATTAGGCTATCTAGACCCTGAATATTACTTGAACTTTCAATTGACAGACAAGAGTGATGTTTATAGTTTTGGAGTCGTCATGTTGGAGCTATTGACTTCTGAGAAAGCCATTGATTTTAATAGAGAAGAGGAAGATGTAAATTTAGTAGTTTATATCAAGAAGATTATCAAAGAAGACAGATTGATGGAGGTTGTTGATCCTGTGATTAAAGAGAGAGCAAGCAGAGTTGGAATGGAGATAATGAAGGCATTAGGGTCTCTAGCAGCAGCTTGCTTGGATGAAAAGAGGCAGAACAGACCTACCATGAAAGAAGTTGCTGATGAGCTAGCCAACATTATTTCCATTCTTAATAGTGAGGTTCCATATATTGACTAA 1899 47.08 METNLSLLILLSLFLCCPAKRCPDCGRTPVPYPLSTRPDCGDPLYRVRCIAGVLWFESLNGSSYLITSVNPVSQRLIVRPPGLAKNACVSSDFGNHGFWLDTGLPFTITNRNTVLLFNCSMEVLENNWNCSPNSVCHDFIRQNPVTMAACKAAPTCCWYKGGGSTEYRFRVWKERCSAYECFVNLGGSVPAKKWPEPGVEIQWAQPREPQCRLAADCRNWENSACLPDPANARQRRCFCKVPFKWDPVNGLCNGNNVKIQSKRTHKKHKKMPAILGAMAGVIVMMIGGSTIFIVFKRRQQIPKGNELSSKQVREVILSANSSGKSARMFTTKEIAKATNNFSKDNLLGSGGYGEVFKGSLEDGTLIAVKRAKLGCLKGIDQILNEVRILCQVNHRCLVRLLGCCLELEQPLLIYEYISNGNLFDHLHGNTSPSKWPPLTLSRRLYIAHQTADGLAYLHTSAMPRIYHRDIKSSNILLDEKLNAKVADFGLSRLAVTESSHITTGAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVMLELLTSEKAIDFNREEEDVNLVVYIKKIIKEDRLMEVVDPVIKERASRVGMEIMKALGSLAAACLDEKRQNRPTMKEVADELANIISILNSEVPYID 632
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 65560596 65562676 - Tan0010858.1 Tan03g0923 746427
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0923 632 Pfam Protein tyrosine and serine/threonine kinase 344 617 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g0923 632 FunFam Wall-associated receptor kinase-like 20 417 629 - -
Tan03g0923 632 ProSiteProfiles Protein kinase domain profile. 341 631 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0923 632 CDD TM_EGFR-like 267 301 - -
Tan03g0923 632 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524(InterPro)
Tan03g0923 632 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 620 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(InterPro)|GO:0007166(PANTHER)
Tan03g0923 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g0923 632 SUPERFAMILY Protein kinase-like (PK-like) 323 617 IPR011009 -
Tan03g0923 632 CDD STKc_IRAK 347 620 - -
Tan03g0923 632 FunFam Wall-associated receptor kinase-like 20 304 416 - -
Tan03g0923 632 SMART serkin_6 341 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0923 632 Gene3D Phosphorylase Kinase; domain 1 303 416 - -
Tan03g0923 632 Gene3D Transferase(Phosphotransferase) domain 1 417 627 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0923 Tan-Chr3:65560596 Tan11g0213 Tan-Chr11:1784671 6.70E-185 dispersed
Tan08g0628 Tan-Chr8:6375965 Tan03g0923 Tan-Chr3:65560596 2.10E-34 dispersed
Tan03g0923 Tan-Chr3:65560596 Tan01g3290 Tan-Chr1:88338933 3.20E-78 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67298 PF07714 PK_Tyr_Ser-Thr 5.20E-45 CL0016 Tan PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0923 - - - 0.0