Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g0923 | ATGGAAACCAATCTTTCCCTTCTCATTTTACTCTCACTCTTCCTTTGTTGCCCGGCCAAGCGCTGCCCAGACTGCGGCCGCACGCCGGTGCCGTACCCACTCAGCACACGCCCGGACTGTGGCGACCCTCTATACAGAGTCCGGTGCATCGCCGGCGTGCTCTGGTTCGAGTCCCTCAATGGGTCTTCCTATTTGATCACATCCGTTAATCCGGTGTCTCAGAGGCTGATCGTCCGGCCGCCAGGGTTGGCCAAAAACGCCTGCGTTTCGTCCGATTTTGGGAACCATGGATTTTGGCTCGACACTGGCCTTCCTTTCACCATTACCAATAGAAACACGGTTCTGCTCTTCAACTGTTCCATGGAAGTCCTCGAAAATAATTGGAACTGTTCGCCAAATAGCGTCTGTCATGACTTCATCCGGCAGAATCCGGTGACCATGGCGGCGTGTAAGGCGGCGCCGACGTGCTGTTGGTATAAAGGTGGAGGCTCCACTGAGTATAGGTTCAGGGTGTGGAAGGAGCGGTGTTCGGCTTATGAATGTTTTGTGAATTTGGGTGGTTCTGTTCCGGCGAAGAAGTGGCCGGAACCTGGGGTGGAGATTCAATGGGCACAGCCGCGAGAGCCGCAGTGTCGACTGGCTGCGGACTGCCGGAATTGGGAGAATTCTGCTTGTTTACCGGACCCTGCAAATGCTCGCCAGAGAAGGTGCTTCTGCAAGGTGCCTTTCAAGTGGGATCCTGTTAATGGCTTGTGTAATGGCAACAATGTGAAAATACAGAGCAAGAGAACTCACAAGAAGCATAAGAAGATGCCTGCTATTCTTGGAGCAATGGCGGGAGTAATCGTCATGATGATTGGAGGTTCGACCATATTTATAGTTTTCAAAAGACGTCAACAGATTCCGAAAGGGAACGAACTCAGTTCGAAACAAGTTCGTGAAGTGATTCTAAGTGCTAACAGCAGTGGCAAATCGGCAAGGATGTTCACAACCAAAGAGATAGCAAAGGCTACAAACAACTTCTCGAAAGATAACTTGCTTGGCTCTGGTGGCTATGGGGAGGTCTTCAAAGGCAGCCTAGAAGATGGAACCTTAATAGCTGTTAAGCGCGCCAAGTTGGGGTGCTTGAAGGGTATCGATCAAATCCTGAACGAAGTTCGAATTCTTTGTCAGGTGAACCATCGATGCCTTGTTCGTCTACTTGGATGTTGTCTCGAACTCGAGCAACCCCTGTTAATATATGAGTACATCTCAAACGGGAACCTATTTGATCACCTTCATGGGAATACAAGTCCAAGCAAATGGCCACCGCTGACATTGAGTCGTCGACTCTACATTGCTCACCAAACAGCTGATGGCCTTGCCTATTTACACACTTCAGCCATGCCAAGAATCTATCACCGAGACATAAAGTCAAGCAATATTCTACTAGACGAGAAGTTGAATGCTAAAGTTGCCGATTTCGGGCTTTCTCGATTGGCTGTTACAGAATCAAGCCATATTACCACTGGGGCTCAAGGAACATTAGGCTATCTAGACCCTGAATATTACTTGAACTTTCAATTGACAGACAAGAGTGATGTTTATAGTTTTGGAGTCGTCATGTTGGAGCTATTGACTTCTGAGAAAGCCATTGATTTTAATAGAGAAGAGGAAGATGTAAATTTAGTAGTTTATATCAAGAAGATTATCAAAGAAGACAGATTGATGGAGGTTGTTGATCCTGTGATTAAAGAGAGAGCAAGCAGAGTTGGAATGGAGATAATGAAGGCATTAGGGTCTCTAGCAGCAGCTTGCTTGGATGAAAAGAGGCAGAACAGACCTACCATGAAAGAAGTTGCTGATGAGCTAGCCAACATTATTTCCATTCTTAATAGTGAGGTTCCATATATTGACTAA | 1899 | 47.08 | METNLSLLILLSLFLCCPAKRCPDCGRTPVPYPLSTRPDCGDPLYRVRCIAGVLWFESLNGSSYLITSVNPVSQRLIVRPPGLAKNACVSSDFGNHGFWLDTGLPFTITNRNTVLLFNCSMEVLENNWNCSPNSVCHDFIRQNPVTMAACKAAPTCCWYKGGGSTEYRFRVWKERCSAYECFVNLGGSVPAKKWPEPGVEIQWAQPREPQCRLAADCRNWENSACLPDPANARQRRCFCKVPFKWDPVNGLCNGNNVKIQSKRTHKKHKKMPAILGAMAGVIVMMIGGSTIFIVFKRRQQIPKGNELSSKQVREVILSANSSGKSARMFTTKEIAKATNNFSKDNLLGSGGYGEVFKGSLEDGTLIAVKRAKLGCLKGIDQILNEVRILCQVNHRCLVRLLGCCLELEQPLLIYEYISNGNLFDHLHGNTSPSKWPPLTLSRRLYIAHQTADGLAYLHTSAMPRIYHRDIKSSNILLDEKLNAKVADFGLSRLAVTESSHITTGAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVMLELLTSEKAIDFNREEEDVNLVVYIKKIIKEDRLMEVVDPVIKERASRVGMEIMKALGSLAAACLDEKRQNRPTMKEVADELANIISILNSEVPYID | 632 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 65560596 | 65562676 | - | Tan0010858.1 | Tan03g0923 | 746427 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g0923 | 632 | Pfam | Protein tyrosine and serine/threonine kinase | 344 | 617 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan03g0923 | 632 | FunFam | Wall-associated receptor kinase-like 20 | 417 | 629 | - | - | |
Tan03g0923 | 632 | ProSiteProfiles | Protein kinase domain profile. | 341 | 631 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan03g0923 | 632 | CDD | TM_EGFR-like | 267 | 301 | - | - | |
Tan03g0923 | 632 | ProSitePatterns | Protein kinases ATP-binding region signature. | 347 | 369 | IPR017441 | GO:0005524(InterPro) | |
Tan03g0923 | 632 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 20 | 620 | IPR045274 | GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(InterPro)|GO:0007166(PANTHER) | |
Tan03g0923 | 632 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 465 | 477 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan03g0923 | 632 | SUPERFAMILY | Protein kinase-like (PK-like) | 323 | 617 | IPR011009 | - | |
Tan03g0923 | 632 | CDD | STKc_IRAK | 347 | 620 | - | - | |
Tan03g0923 | 632 | FunFam | Wall-associated receptor kinase-like 20 | 304 | 416 | - | - | |
Tan03g0923 | 632 | SMART | serkin_6 | 341 | 624 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan03g0923 | 632 | Gene3D | Phosphorylase Kinase; domain 1 | 303 | 416 | - | - | |
Tan03g0923 | 632 | Gene3D | Transferase(Phosphotransferase) domain 1 | 417 | 627 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g0923 | Tan-Chr3:65560596 | Tan11g0213 | Tan-Chr11:1784671 | 6.70E-185 | dispersed | |
Tan08g0628 | Tan-Chr8:6375965 | Tan03g0923 | Tan-Chr3:65560596 | 2.10E-34 | dispersed | |
Tan03g0923 | Tan-Chr3:65560596 | Tan01g3290 | Tan-Chr1:88338933 | 3.20E-78 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67298 | PF07714 | PK_Tyr_Ser-Thr | 5.20E-45 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g0923 | - | - | - | 0.0 |