Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0928 ATGGCTTCCTCTGTTCATTTGTTCATCAAATTTTTTTCAGCTCTGATTTTCCTCTCTACACAAACGCTATCCCACCACAACCAACTCTTCTATCATGGATTCAACGGATCCACCAACATACTCTTGAAAGAATCCGCAGAAATTGAGACGAATGGAGTTTTGAGGCTAACGGATCAATCCCAAACCATCCTCGGACAGGCGTTTTACAGCTCTCCAATTCTGTTCAGGAACTCCTCCACCGCCACAGACGGTGGCAGCGCCGGCGGAGTTTTTTCTTTCTCCACGTGTTTTGTCTTCTGCATCATTTCCGATGATGAAAACTACGCCGGTCATGGCTTGAGTTTCGCCATCGTTCCTTCTAAAGATCTCGTAGCTGAGCCACAGACGTTTCTTGGCCTCTTCAACATGGCCAACAACGGAAATTCCTCAGTTCATATCTTCGCTGTTGAATTCGATACATTCAAAGATATTACGTTGAAAGATATCAACTACAATCATGTGGGTATCGATTTAAACAGTTTGATTTCAAACGTCTCTGCTCCGGCTGCGTATTTCGACGATGATGGTGAAGTTCGTAATATGTCACTCAAAAGTGGGAAGCCTGTTAAAGTTTGGATCGATTATGATTCTGATGAAACCACTCTGAATGTCACGATTTCTCCTTTTGCTTCAAAACCCAGAACGCCACTTCTGTCAAACAGAGTGGATCTCTCGTCAATTTTGAATGAAGAAATGTATATTGGATTTACTGCTTCAACGGGTCACCTCGTTGCTAGTTCGCATTACATTTTGGGGTGGAGTTTCGCCATTAATGGCCAAGCTCGAGATCTTGTCCTCTCTTCGCTTCCGTTACCGTCTAAGAAGAAAACAGGGGCGAAAATCGGAGTCACTGTTTCTGTTTCCGTGTCTGCAGCTGTGATTGTTTTGGGGATCTCTGTTTTCGTTTTTGGTATTTATCTCTTCAGGAAGTACAAGGAATCCGACGGAATCGAGCCGTGGGAGCTCCAAGTCGGACCCCATCGCTATTCCTACAGAGATCTCCAAAAAGCTACAAGGAATTTCAGCGAGAAAGAGATTCTTGGGTTTGGCGGATCTGGGAAAGTATACAACGGAATCCTTCCGATTTCGAAAACCCAAATCGCCGTTAAGCGAATTTCTCACAATTCGAAACAGGGTCTCCGGGAATTCGCGACGGAAATCGCCACAATCGGAAAGCTCCGTCACCGGAATCTTGTTCAATTACTCGGATGGTGTCGCCGGCGGCAAGATCTGCTTCTGGTTTCCGAATTTATGGCGAAAGGGAGCTTGAATAACTACCTATTCGACGACCCGAAAACGATTCTGAATTGGGAACAGAGATTCAAAATCATTAAAGGGGTTGCCTCCGCTCTTCTTTATCTTCACGAGGGTTACAAACAGGTGGTGATTCACCGAGACGTGAAGGCGAGCAATGTGTTATTAGACGGCGAATTGAACGGGAAATTGGGGGATTTCGGGCTCGCGAGGGTGTACGAGCATGGGTCGGATCCGTCGACAACTCGGGTTGTCGGAACTTTGGGGTATTTGGCGCCAGAGCTACCGAGAACAGGGATATCGACGACGAGCTCCGACGTGTACGCGTTTGGGGCTCTGATGCTGGAAGTGGCTTGCGGGCGGCGGCCGGTGGAGTTGAAGGCGTTACCAGAGGAGATGACGTTGGTGGATTGGGTTTGGGATAAATACAGAGAAGGGCGGCTTTTGGCCGTCGTCGATCCGAAGCTCCGGGGAAATTACGACGAGGTTGAGGCGGCGATGGTGTTGAAATTGGGGGTTCTGTGTTCGAATAATGAGCCGACGCAACGCCCGAGTATGAAGCAGATTGTGAGATGTTTGGACAGAGAAATTAGCGTCGCCGACGAGTGGAAGGCGCCGGGCAGCGGCGGGAGTAACGGCGGTGCGGTGGGGGATTTCCTTGTGTCTTTTACGTCTTCGTCAATTAGTGGAGAAAGCTCGGGTTAG 1998 48.25 MASSVHLFIKFFSALIFLSTQTLSHHNQLFYHGFNGSTNILLKESAEIETNGVLRLTDQSQTILGQAFYSSPILFRNSSTATDGGSAGGVFSFSTCFVFCIISDDENYAGHGLSFAIVPSKDLVAEPQTFLGLFNMANNGNSSVHIFAVEFDTFKDITLKDINYNHVGIDLNSLISNVSAPAAYFDDDGEVRNMSLKSGKPVKVWIDYDSDETTLNVTISPFASKPRTPLLSNRVDLSSILNEEMYIGFTASTGHLVASSHYILGWSFAINGQARDLVLSSLPLPSKKKTGAKIGVTVSVSVSAAVIVLGISVFVFGIYLFRKYKESDGIEPWELQVGPHRYSYRDLQKATRNFSEKEILGFGGSGKVYNGILPISKTQIAVKRISHNSKQGLREFATEIATIGKLRHRNLVQLLGWCRRRQDLLLVSEFMAKGSLNNYLFDDPKTILNWEQRFKIIKGVASALLYLHEGYKQVVIHRDVKASNVLLDGELNGKLGDFGLARVYEHGSDPSTTRVVGTLGYLAPELPRTGISTTSSDVYAFGALMLEVACGRRPVELKALPEEMTLVDWVWDKYREGRLLAVVDPKLRGNYDEVEAAMVLKLGVLCSNNEPTQRPSMKQIVRCLDREISVADEWKAPGSGGSNGGAVGDFLVSFTSSSISGESSG 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 65681862 65684426 - Tan0001793.1 Tan03g0928 746432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0928 665 Pfam Protein kinase domain 355 621 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0928 665 ProSiteProfiles Protein kinase domain profile. 354 628 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0928 665 SUPERFAMILY Protein kinase-like (PK-like) 330 624 IPR011009 -
Tan03g0928 665 Gene3D - 28 280 - -
Tan03g0928 665 Gene3D Phosphorylase Kinase; domain 1 339 430 - -
Tan03g0928 665 SMART serkin_6 354 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0928 665 FunFam L-type lectin-domain containing receptor kinase S.4 431 636 - -
Tan03g0928 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g0928 665 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 283 IPR013320 -
Tan03g0928 665 PANTHER - 34 628 IPR050528 GO:0005886(PANTHER)
Tan03g0928 665 FunFam serine/threonine-protein kinase PBS1-like 322 430 - -
Tan03g0928 665 FunFam L-type lectin-domain containing receptor kinase S.4 25 276 - -
Tan03g0928 665 CDD STKc_IRAK 360 626 - -
Tan03g0928 665 Gene3D Transferase(Phosphotransferase) domain 1 431 636 - -
Tan03g0928 665 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524(InterPro)
Tan03g0928 665 CDD lectin_legume_LecRK_Arcelin_ConA 31 272 IPR001220 GO:0030246(InterPro)
Tan03g0928 665 Pfam Legume lectin domain 28 277 IPR001220 GO:0030246(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0928 Tan-Chr3:65681862 Tan08g2022 Tan-Chr8:72301086 6.10E-221 dispersed
Tan03g0928 Tan-Chr3:65681862 Tan03g0929 Tan-Chr3:65731589 2.60E-171 tandem
Tan01g1843 Tan-Chr1:19686140 Tan03g0928 Tan-Chr3:65681862 9.60E-97 transposed
Tan11g1173 Tan-Chr11:9679919 Tan03g0928 Tan-Chr3:65681862 1.10E-82 transposed
Tan03g0928 Tan-Chr3:65681862 Tan08g2021 Tan-Chr8:72294741 3.30E-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67299 PF00069 Pkinase 9.60E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0928 - - - 0.0