Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0929 ATGGCGGAAATCTTCATCTTCACGTTAATTCTTTCTATTCCTATTTCTTTAGTTTCCGGAGCTTCTGAAGATCTCAACTTCACCTTCAATGGCTTCCGCCCAGGCGATCTCAGCCTCGACGGCGTCGCCGAAGTAACTTCCGATGGCCTTTTGAAGCTTACTAACGACGCCGACCAACAAATCGGCCACGCTTTTTACCCCAATTCCATTTCCTTCAAAAACCAATCGAAAAATTCTTCAGTTTCCTCCTTCTCTGCAACTTTTGTCTTCGCCATAATTTCCGAATATCACGACCTCGGCGGCCATGGAATTGCCTTCGTCCTTTCGCCGTCGATGGGTATCCCCGGAGCTCGCCCGAGCGAAAGCCTCGGCCTGTTCAACGAGTCCAACAATGGGAACGAAACGAATCACATCTTCGCCGTTGAACTCGACACGATACAGAATATGGACCTTAATGACATCAACAAGAACCATGTCGGAATCAACATCAACGGACTCGTGTCGGAGGACGCGAAGCCGGCGGGGTATTGGTTCGACGGCGAATTTAATAATTTGACGCTAATCAGTGGCGAACCGATGCAAGTTTGGGTGGAATACGATGGTTTTGATACGCAAATTGATGTCACTATTGCTCCAATTGACATCATCGATAAACCCAGAAGTCCCCTTTTGTCTTTCCAGCGGGATTTGTCGTCGGTCATCAACGAAATCATGTACGTCGGATTCTCGTCGTCGACAGGCTCCATTACGACGTCGCATTACGTTCTGGGTTGCAGCTTCAGAATCAATGGCGAAGCGCAGAAGCTTGCTCTGTCTCAACTGCCAGAGCTACCAACTCGGGCGAGAAAAAAACAGAGATCTAAATTTCTTACCGTGGGATTGCCATTGATTTGTAGTTCAGTGGCTTTAATGGCAGTTTTTGGCGTAACTTACTTCATTCATCGAAGGCGGAAATTTGCAGAGATATTAGAGGATTGGGAGCTGGAATATGGACCTCAGAGGTTCAAATACAAGGATCTATACATAGCCACAAAGGGATTTAGAGAGAGGGAATTTCTGGGATTTGGGGGATTCGGTCGAGTTTACAAAGGGGTTTTACCAAATTCGAAAATTGAAGTTGCAGTGAAGAAGACAAGTCACGGATCGAGACAGGGGATGAAGGAATTCGTGGCGGAGATAGTAAGTGTAGGGCGGCTCCGACACCGGAACCTGGTGGCGCTGCTGGGGTACTGCCGGCGGAAAGAAGAGCTATTTCTGGTGTACGAATATATGCCAAATGGAAGCTTGGACAGTTACTTACATGACTCGCCGGAGATCACAATCAATTGGGAGCAGAGATTTGAGATCATAAAAGGGGTTGCGTCGGGGCTGTTTTATCTCCATGAACAGTGCGAACAAGTAGTGATTCATAGAGATGTGAAGGCGAGTAATGTGTTGCTTGACGCTGATTTCAATGGGAGATTGGGGGATTTTGGTTTGGCCAAAATGCATAACCGTGGCACTGATCCTCGAACCACCCACGTCGTTGGAACTCTTGGGTATCTAGCGCCAGAACACATAAGAACAGGGAGAGCCACAACGAGAACGGACGTATACGCATTCGGAGCATTTCTTCTGGAAGTTGCCTGCGGAAGAAGGCCAATTCACCAGCAAGACGAAGCCGACGATTTCATATTAATGGATTGGGTCTTCTCCTGTTGGTCAAACGGCAACATTCTCAGAACCGCCGACCCTAAATTGGGCGGCAATTTCGAACCTTCACAGCTTGAATTGGTGCTCAAACTTGGCTTGCTCTGTTCCCACTCCTCGCCGGCGGTTCGCCCCACCATGCGCCAGGTTTTGCAGTATTTGGAGGCCGATGCGCCGCTTCCGGAGCTCGCATCGCTCCGGTGGCGGCTCTCCGGCAATGGGTTTTTTAATTTGAGCCGTCGCGACGGCGACGGCGATGGATTGGATGATTTTTCGATGTCTTATCCGCTTTCGACGGAGAGGAATGTGACGAGTTCGTCGTCGGTTGTGGAGTCTATTCTGTCGGATGGGCGCTGA 2046 49.12 MAEIFIFTLILSIPISLVSGASEDLNFTFNGFRPGDLSLDGVAEVTSDGLLKLTNDADQQIGHAFYPNSISFKNQSKNSSVSSFSATFVFAIISEYHDLGGHGIAFVLSPSMGIPGARPSESLGLFNESNNGNETNHIFAVELDTIQNMDLNDINKNHVGININGLVSEDAKPAGYWFDGEFNNLTLISGEPMQVWVEYDGFDTQIDVTIAPIDIIDKPRSPLLSFQRDLSSVINEIMYVGFSSSTGSITTSHYVLGCSFRINGEAQKLALSQLPELPTRARKKQRSKFLTVGLPLICSSVALMAVFGVTYFIHRRRKFAEILEDWELEYGPQRFKYKDLYIATKGFREREFLGFGGFGRVYKGVLPNSKIEVAVKKTSHGSRQGMKEFVAEIVSVGRLRHRNLVALLGYCRRKEELFLVYEYMPNGSLDSYLHDSPEITINWEQRFEIIKGVASGLFYLHEQCEQVVIHRDVKASNVLLDADFNGRLGDFGLAKMHNRGTDPRTTHVVGTLGYLAPEHIRTGRATTRTDVYAFGAFLLEVACGRRPIHQQDEADDFILMDWVFSCWSNGNILRTADPKLGGNFEPSQLELVLKLGLLCSHSSPAVRPTMRQVLQYLEADAPLPELASLRWRLSGNGFFNLSRRDGDGDGLDDFSMSYPLSTERNVTSSSSVVESILSDGR 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 65731589 65735945 + Tan0008913.1 Tan03g0929 746433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0929 681 Gene3D - 22 275 - -
Tan03g0929 681 FunFam Lectin-domain containing receptor kinase A4.3 332 423 - -
Tan03g0929 681 Pfam Protein kinase domain 349 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0929 681 CDD STKc_IRAK 353 618 - -
Tan03g0929 681 CDD lectin_legume_LecRK_Arcelin_ConA 25 264 IPR001220 GO:0030246(InterPro)
Tan03g0929 681 SUPERFAMILY Protein kinase-like (PK-like) 322 618 IPR011009 -
Tan03g0929 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g0929 681 Pfam Legume lectin domain 25 275 IPR001220 GO:0030246(InterPro)
Tan03g0929 681 FunFam L-type lectin-domain containing receptor kinase S.4 424 630 - -
Tan03g0929 681 PANTHER - 27 631 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Tan03g0929 681 Gene3D Transferase(Phosphotransferase) domain 1 424 630 - -
Tan03g0929 681 ProSitePatterns Protein kinases ATP-binding region signature. 353 377 IPR017441 GO:0005524(InterPro)
Tan03g0929 681 FunFam L-type lectin-domain containing receptor kinase V.9 24 267 - -
Tan03g0929 681 SMART serkin_6 347 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0929 681 ProSiteProfiles Protein kinase domain profile. 347 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0929 681 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
Tan03g0929 681 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 281 IPR013320 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0929 Tan-Chr3:65731589 Tan08g2021 Tan-Chr8:72294741 1.00E-242 dispersed
Tan03g0928 Tan-Chr3:65681862 Tan03g0929 Tan-Chr3:65731589 2.60E-171 tandem
Tan03g0929 Tan-Chr3:65731589 Tan03g0930 Tan-Chr3:65768517 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67300 PF00069 Pkinase 5.10E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0929 - - - 0.0