Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0930 ATGGCCGCAATCTTCATCTTCATGTTAATTATTTCTATATCCATTTCTGTTACTTCTGAAGATCTCAGCTTCACCTTCAATGGCTTCCGCTCCGGCAATCTCAGTCTCGACGGCGTCGCCGAAGTAACCTCCAACGGCCTTTTGAAGCTCACCAACGACGACAACCAAAAAATGGGCCACGCCTTTTACCCCAATTCCATTTCCTTCAAAAGCCCATCAAACAATTCCTCACTTTCCTCCTTCTCTGCAACTTTCGTCTTCGCTATAAGATCCAAATATCCTGAAATCGCCGGTCATGGAATTGCCTTCGTCATTTCGCCGTCGAGGGGTATCCCCGGAGCTCGGCCGAGTCAAAACCTCGGCTTGTTCAACGAGTCCAACAATGGAAACAAAACAAATCACATCTTCGCCGTTGAACTCGACACGATTGAGAATCAAGAACTTGAAGACATCAACAACAACCATGTCGGAATCGACATTAACGGACTGGTGTCGGAGTGGGCGGAACCGGCGGGGTATCGGGTCAACGGCGAATTTAAGAATTTGACGCTAAGCAGTGGCGAACCGATGCAAGTTTGGGTGGAATACGACGGCTTTGATAAGCGAATTAATGTCACTATGGCTTCAATGGAGATCATCGATAAACCCAAAACCCCTCTTTTATCTTTGCAGCGGGATTTGTCATCAGTCATCGACAAAATCATGTACGTCGGATTCTCGTCGTCGACAGGCTCCATTAAGACAGTGCATTACATTCTGGGTTGGAGCTTTAGAGTCAATGGCGAAGCGCAGACGCTTGCTCTGTCTCAACTCCCCGAGCTTCCTCGAACAGGAAAAAAACAGAGATCTAAATTCTTGACGATGGGGTTGCCGTTGATTTGTGGTTCATTGGGTTTCATGGCAGCCTCCGGTATACTTTATTTCTTTTATCGGAGGCGGAAATTCGCAGAGATTTTAGAGGATTGGGAGCTGGAATATGGACCCCAAAGGTTCAAATACAAGGATCTATACAAAGCCACAAAGGGATTTAGTGAGAAAGAAGTTCTGGGAATTGGGGGATTCGGTCGAGTTTACAAAGGGGTTTTACCAAATTCGAAAATTGAAGTTGCAGTGAAGAAGATATCTCACGAATCGAGACAGGGGATGAGGGAATTTGTGGCGGAGATAGTGAGCGTTGGGCAGCTCCGGCACCGGAACGTGGTGGGGCTGTTGGGATACTGTCGGCGGAAACGGGAACTGTTTTTGGTGTATGAATATATGCCAAATGGAAGCTTGGATAAGTATTTACATGATAGGCCAGAAATCACAATCAATTGGGAGCAGAGATTTGAGATCATAAAAGGGGTTGCGTCGGGGCTGTTTTATCTCCATGAACAGTGCGAACAAGTAGTGATTCATAGAGATGTGAAGGCGAGTAATGTGTTGCTTGACGCTGATTTCAATGGGAGATTGGGGGATTTTGGTTTGGCCAAAATGCATGACCGTGGCGCCGATCCTCAAACCACCAACGTCGTTGGAACTCTTGGGTATCTACCACCAGAGCTCATGAGAACAGGGAGAGCCACAACGAGATCAGACGTATACGCATTCGGAGCATTTCTTCTGGAAGTGGCCTGCGGGAGAAGGCCAATTCACCAGCAAGACGAACCCAACGATTTCATATTAATGGATTGGGTCTTCTCCTGTTGGACAAACGGCAACATTCTCAGAACCGCCGACCCTAAATTGCGCGGCAATTTCGAACCTTCGCAGCTCGAATTGGTGCTCAAACTTGGCTTGCTCTGCTCCCACTCCTCGCCCGCGGTTCGCCCCACCATGCGCCAGGTTCTGCAGTATTTGGAGGCCGATGCGCCGCTGCCGGACCTCGCCTTACTCCGGTGGCGACTCTCCGGCAGTGGGTTCTTGAAGTTGATGCGTCGTGACGGCGACGGCGATGGTGATGGGTTGGATGATATTACCATTGCAGTGTCTTCTCCGTTTTCGACGGAAAGGAATGTGACGAGCTCGTCGTCGGTCGCGGAGTCTATTCTGACGGAAGGACGTTAG 2046 48.88 MAAIFIFMLIISISISVTSEDLSFTFNGFRSGNLSLDGVAEVTSNGLLKLTNDDNQKMGHAFYPNSISFKSPSNNSSLSSFSATFVFAIRSKYPEIAGHGIAFVISPSRGIPGARPSQNLGLFNESNNGNKTNHIFAVELDTIENQELEDINNNHVGIDINGLVSEWAEPAGYRVNGEFKNLTLSSGEPMQVWVEYDGFDKRINVTMASMEIIDKPKTPLLSLQRDLSSVIDKIMYVGFSSSTGSIKTVHYILGWSFRVNGEAQTLALSQLPELPRTGKKQRSKFLTMGLPLICGSLGFMAASGILYFFYRRRKFAEILEDWELEYGPQRFKYKDLYKATKGFSEKEVLGIGGFGRVYKGVLPNSKIEVAVKKISHESRQGMREFVAEIVSVGQLRHRNVVGLLGYCRRKRELFLVYEYMPNGSLDKYLHDRPEITINWEQRFEIIKGVASGLFYLHEQCEQVVIHRDVKASNVLLDADFNGRLGDFGLAKMHDRGADPQTTNVVGTLGYLPPELMRTGRATTRSDVYAFGAFLLEVACGRRPIHQQDEPNDFILMDWVFSCWTNGNILRTADPKLRGNFEPSQLELVLKLGLLCSHSSPAVRPTMRQVLQYLEADAPLPDLALLRWRLSGSGFLKLMRRDGDGDGDGLDDITIAVSSPFSTERNVTSSSSVAESILTEGR 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 65768517 65770778 + Tan0000684.1 Tan03g0930 746434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0930 681 CDD lectin_legume_LecRK_Arcelin_ConA 22 261 IPR001220 GO:0030246(InterPro)
Tan03g0930 681 Pfam Protein kinase domain 344 611 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0930 681 SMART serkin_6 343 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0930 681 FunFam L-type lectin-domain containing receptor kinase S.4 420 625 - -
Tan03g0930 681 FunFam Lectin-domain containing receptor kinase A4.3 328 419 - -
Tan03g0930 681 Gene3D - 19 271 - -
Tan03g0930 681 ProSitePatterns Protein kinases ATP-binding region signature. 349 373 IPR017441 GO:0005524(InterPro)
Tan03g0930 681 PANTHER - 24 628 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Tan03g0930 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g0930 681 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Tan03g0930 681 ProSiteProfiles Protein kinase domain profile. 343 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g0930 681 FunFam L-type lectin-domain containing receptor kinase V.9 21 264 - -
Tan03g0930 681 SUPERFAMILY Protein kinase-like (PK-like) 324 619 IPR011009 -
Tan03g0930 681 MobiDBLite consensus disorder prediction 661 681 - -
Tan03g0930 681 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 279 IPR013320 -
Tan03g0930 681 Pfam Legume lectin domain 22 271 IPR001220 GO:0030246(InterPro)
Tan03g0930 681 Gene3D Transferase(Phosphotransferase) domain 1 420 623 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0930 Tan-Chr3:65768517 Tan08g2021 Tan-Chr8:72294741 1.30E-234 dispersed
Tan03g0929 Tan-Chr3:65731589 Tan03g0930 Tan-Chr3:65768517 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67301 PF00069 Pkinase 1.10E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0930 - - - 0.0