Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0949 ATGGGAAATCGAATTGGGAAAATTGGCCACTGCTTCGCCGGCGACGGCGATATCTCCCGTCGGTATGATCCCGCCGACATTATTGCCGACCCCCACGACGGCGGTTTCGGCCACTCCTTCTACTACCTCCCACCCGACCCACATACTATCTCATCCTCCAAAGATTTCTCCGACGAGTACATCTCTCCGGCGACGATTTTCCGGTCGATTTCCGGCGCCTCTGTAAGCGCCAACGTCTCAACGCCGCTCTCCACTTCTCTCGTCGATCTCTATCCTTACAGCACCACGTTTGATCGGGCCGCCGCCTTCGATTGCTCGAATTCCTTCGCCTCCGTGCCGCTGCAGCCGGTGCCCCGCCACTCGGTGTCGGGAAATTCCGGCGGATTTCCTTTTTCGGGTCCGATTGAGAGAGGTTTTTTATCCGGACCCTTGGCCAGCCGGAACGAATCGGGTCCGATTGATCGTGGGGTGTATTCCGGCCCGATTGAAAAGGGCGTCGGTGGCGGACCCGAGAAATTGCGGAGGAGCTTCTCTCAAGGCGGTGGTGGAGATAGACAACCGAAATCGAAAAGAAGAAGTCTCATTCGGATTCTTAAGAGAGCTATATCAAAAACCATTTCTCGAAACCAGAAGGCTGCGAGTTCGAGAGTGAGAGAATCGGAATCGTATAAACACAACGAAAATGCTGCAGCTACTCAGACTCAAAGCAGCATTCATTTGAGCAGCCACGCGAGCTTGGCGCAGGAAGACGACGGTGATTACTTTCTCGGCGGTCAGAGCGTACAGTGGGCACAGGGGAAGGCCGGTGAGGACAGAGTTCACGTGGTGGTTTCCGAGGATAATGGTTGGGCTTTCGTCGGAATTTACGATGGATTCAACGGCCCTGATGCTCCTGATTACTTACTCGCCAATCTCTACACTGCAGTTCTCAAAGAGCTCAAGGGTTTGATTTGGAATGATAAGTTTGATTCGACTGCGACTTCGTCTTCCATGAACTCATCAAACTCTGCTTCAATTGAGGAAGAAGATGTAGCAACCCACATGAAAAATCAGGGGAATGATCATCGATCTAAGAATTTCCCTGTGAATTTGGAGGCTGATTCGGTGAGGAAAAGAGAGAGAGTTTACAATACAAACTATAGGACGAGTCAGCTGATGAAGAAGGCCGATCAGAATCCTAAAAATTGGAAATGCGAATGGGAAAGGGAAAGATTAGGATTCGATGGGAAGTTGAACAATAGACAATTAGATCATCACCAAATATGGGATGAATCAACAGCAATCAATCATTCTGAGGTGTTGAATGCTCTGTCTCAAGCATTGAGAAAAACAGAGGAAGCATATCTACAGAATGCAGACAAGATGGTGACAAGAAATCCCGAGCTAGCTCTTATGGGTTCTTGTGTTTTGGTTATGTTGATGAGAGGAGAAGATGTCTACTTGATGAATGTCGGAGACAGCCGCGCCATTGTAGCGCAGCAACTCGAACCAGAATTTGGGATTGGAAAGCCATATAGAGACTTGGAGAGGATCAATGAAGGAACACTACGAGTATTTGAATCCTCTAATGGTGTAGAGTTTGAAAGACTAACAACCTTAGCTTCTCATCAGCTTACGATGGATCACAGCACGTACACAGAGGAGGAAGTTCAGAGGATCAAGAATGCTCATCCCGACGACGCTTCTGCAATTATGAATGACAGAGTGAAAGGTTATTTGAAAATCACACGGGCGTTCGGAGCTGGCTTTCTCAAACAGCCAAAGTGGAATGATGCATTGCTAGAGATGTTCAGAATAGACTATGTGGGAAATTCACCTTACATCACCTGTGATCCAACTCTCGGCCATTATAAACTCAGCCCAACAGACAGATTCTTGATACTGTCATCTGATGGACTCTATCAGTACTTCACCAATGAGGAAGCTGTTTCTCAAGTAGAGTCCTTCATTGCTTCTTTTCCTGAAGGAGATCCTGCTCAACATCTCATTGAAGAAGTATTGTTCCGAGCAGCGAAAAAATACGGAATGGACTTCCATGAGCTGCTTGATATCCCACAAGGGGAGCGGCGGAAGTACCACGATGACGTTTCAGTAATCATCATTTCATTCGAAGGGAGAATTTGGCATTCATTGATGTAA 2139 47.64 MGNRIGKIGHCFAGDGDISRRYDPADIIADPHDGGFGHSFYYLPPDPHTISSSKDFSDEYISPATIFRSISGASVSANVSTPLSTSLVDLYPYSTTFDRAAAFDCSNSFASVPLQPVPRHSVSGNSGGFPFSGPIERGFLSGPLASRNESGPIDRGVYSGPIEKGVGGGPEKLRRSFSQGGGGDRQPKSKRRSLIRILKRAISKTISRNQKAASSRVRESESYKHNENAAATQTQSSIHLSSHASLAQEDDGDYFLGGQSVQWAQGKAGEDRVHVVVSEDNGWAFVGIYDGFNGPDAPDYLLANLYTAVLKELKGLIWNDKFDSTATSSSMNSSNSASIEEEDVATHMKNQGNDHRSKNFPVNLEADSVRKRERVYNTNYRTSQLMKKADQNPKNWKCEWERERLGFDGKLNNRQLDHHQIWDESTAINHSEVLNALSQALRKTEEAYLQNADKMVTRNPELALMGSCVLVMLMRGEDVYLMNVGDSRAIVAQQLEPEFGIGKPYRDLERINEGTLRVFESSNGVEFERLTTLASHQLTMDHSTYTEEEVQRIKNAHPDDASAIMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDYVGNSPYITCDPTLGHYKLSPTDRFLILSSDGLYQYFTNEEAVSQVESFIASFPEGDPAQHLIEEVLFRAAKKYGMDFHELLDIPQGERRKYHDDVSVIIISFEGRIWHSLM 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 65987928 65990879 + Tan0001240.1 Tan03g0949 746453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0949 712 MobiDBLite consensus disorder prediction 327 341 - -
Tan03g0949 712 MobiDBLite consensus disorder prediction 206 237 - -
Tan03g0949 712 ProSiteProfiles PPM-type phosphatase domain profile. 255 703 IPR001932 -
Tan03g0949 712 FunFam Protein phosphatase 2C 29 240 710 - -
Tan03g0949 712 PANTHER PROTEIN PHOSPHATASE 2C 234 703 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Tan03g0949 712 SUPERFAMILY PP2C-like 266 704 IPR036457 -
Tan03g0949 712 SMART PP2C_4 244 701 IPR001932 -
Tan03g0949 712 MobiDBLite consensus disorder prediction 140 193 - -
Tan03g0949 712 MobiDBLite consensus disorder prediction 327 364 - -
Tan03g0949 712 CDD PP2Cc 422 703 IPR001932 -
Tan03g0949 712 Pfam Protein phosphatase 2C 414 671 IPR001932 -
Tan03g0949 712 Gene3D - 224 708 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2165 Tan-Chr1:25277894 Tan03g0949 Tan-Chr3:65987928 3.80E-124 dispersed
Tan03g0949 Tan-Chr3:65987928 Tan05g0391 Tan-Chr5:2812307 2.90E-176 dispersed
Tan03g0949 Tan-Chr3:65987928 Tan03g0950 Tan-Chr3:65987928 0.00E+00 tandem
Tan03g0949 Tan-Chr3:65987928 Tan05g0390 Tan-Chr5:2812307 2.10E-195 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0949 - - - 0.0