Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0952 ATGATTGCAGTGTGTCTTGATGGGAGCTTGCCTGGATACCATTTTCAGAAAGGGTTCGGATCTGGTTCTAGTAACTGGGTGCTTCACATTGAGGGTGGAGGTTGGTGCGATTCAGTCTCGTCCTGTTCTTTGCGTAAAATGTCCCCGTTAGGTTCATCAGACTACATGGATCGTCGAGTTCGTTTTTCTGGAATTTTAAGTAGTGATTCGTCCAAAAACCCTGATTTCTATAATTGGAACAAAATCAAGATACGTTACTGTGATGGAGCATCGTTTGGAAGCCATCCCGAGGGTGAACTGAAGAATGGAAACAGACTTTATTTCAGAGGCCAGCTCATCTGGGAATCACTTATGGACGAACTCTTATCTATTGGCTTGTTAAAGGCAAGGCAGGCTCTTCTTTCAGGGTGCTCTGCTGGGGGCTTGGCTACCCTTATACATTGTGATGACTTCAGAGAGCTTTTGCCGAAGGATGCAACTGTCAAGTGTCTAGCTGATGCTGGCTTTTTCCTTGACGAGAAAGATGTTTCGGGAAATCATACAATGAGATCTTTCTATCATGATGTTTTCTACCTTCAGAACATTGCTAAAAGCTTACCCAAGGATTGTACAGCAACAGAAGAGCCATCTAAGTGTCTCTTTCCTCAAGAAATTATCAAACATATAAGCACCCCATTGTTTCTTGTCAACCCAGCTTATGATTTTTGGCAGATACAACATGTCTTGGTACCAAATGCATTAGATCCTGCTGGCTCTTGGCAGAAATGTAGGCTTAATATTCATAAATGTGATCATGCTCAGCTTGAAATTCTTCAAGGGTTCCGAGACTCTTTACTGAAGGCATTGAAGGACTTCGAGCACAACAAGGAAGGAGGACTTTTTGTAAATTCTTGCTTCATCCATTGCCAAACATGGATGTCTGAGACATGGCATTCCCCCAATTCTCCAAGGATAAATAAGAGGACTATAGCAGAGGCCGTTGGTGATTGGTACTTCAAACGAAATTCAGTGAAGCTAATTGACTGCCCTTTTCCATGCAATCCTACCTGCATTCATATGGATTTTAGCTGA 1071 42.58 MIAVCLDGSLPGYHFQKGFGSGSSNWVLHIEGGGWCDSVSSCSLRKMSPLGSSDYMDRRVRFSGILSSDSSKNPDFYNWNKIKIRYCDGASFGSHPEGELKNGNRLYFRGQLIWESLMDELLSIGLLKARQALLSGCSAGGLATLIHCDDFRELLPKDATVKCLADAGFFLDEKDVSGNHTMRSFYHDVFYLQNIAKSLPKDCTATEEPSKCLFPQEIIKHISTPLFLVNPAYDFWQIQHVLVPNALDPAGSWQKCRLNIHKCDHAQLEILQGFRDSLLKALKDFEHNKEGGLFVNSCFIHCQTWMSETWHSPNSPRINKRTIAEAVGDWYFKRNSVKLIDCPFPCNPTCIHMDFS 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 65993579 66001140 - Tan0006692.2 Tan03g0952 746456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0952 356 PANTHER NOTUM-RELATED 3 352 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Tan03g0952 356 Pfam Pectinacetylesterase 3 336 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0952 Tan-Chr3:65993579 Tan09g0029 Tan-Chr9:1437824 1.10E-118 dispersed
Tan03g0951 Tan-Chr3:65993579 Tan03g0952 Tan-Chr3:65993579 9.70E-220 tandem
Tan03g0952 Tan-Chr3:65993579 Tan03g0953 Tan-Chr3:65993579 1.70E-124 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0952 K19882 - csv:101206380 685.256