Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0967 ATGGTATTTCCCTCCATCCCATCTTATCTTGATCCAACAACCCATCCATGGCAACAGCAGCAGCAACAGCAAACAGGAAGCCATCAATCCGGCAGTATCATCGGAGGTGGCAGTTTTCAGCTCGTGTCGCCGCCGCGGGCTCAGCCACAAGTGCGACCCGGATCGATGTTGGATCGGGCTCGAATGGCGAACCTGCCGGTGCCGGAGACGGCGCTGAAGTGCCCAAGATGTGATTCTACAAACACAAAGTTTTGTTACTTCAACAACTATAGCCTGTCTCAACCGCGCCACTTCTGCAAGACCTGCCGCCGCTACTGGACCAGAGGCGGCGCCCTCAGAAGCGTCCCCGTCGGCGGCGGATACCGCCGGAATAATAAAAGAACCAAAAGTACCTCTAAATCTCCGGTTAACTCCCAATGCCAATCTACTACTTCTGCTGCAGCTGAGCTTTCAGCAGGAGAAGTAATGAGATTAAATTACAATGCCATTTCCACACCAAATGAAGGAGCTGGGGATTCAAGTCATCCCATTGAGATAGCCAACTTTTTAGGGTTTGATCAAATTCAATGGCGTCCACAGCTTCAGCTTCACCAAATGCAACCGTCGCCGTTGCTCGCAAATTCTTCAGCTCGGTTGCTCGGAAATAATAGCATCGACGCAACTTCGAGCTACAACATCGTCGGGCAGATTCAGAAGAAGATGGAGACGACGAAAATGGAGGAAGATGGGCAACAACAGGTTAATGTGGGGAAGCCATTTTTGGGAGTTGTTGCAGGGAGTGATCGCCATTATTGGAGTGGTTTTAATCCTTCATCTTCTTCCCATTCACAAATATGA 837 50.06 MVFPSIPSYLDPTTHPWQQQQQQQTGSHQSGSIIGGGSFQLVSPPRAQPQVRPGSMLDRARMANLPVPETALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNKRTKSTSKSPVNSQCQSTTSAAAELSAGEVMRLNYNAISTPNEGAGDSSHPIEIANFLGFDQIQWRPQLQLHQMQPSPLLANSSARLLGNNSIDATSSYNIVGQIQKKMETTKMEEDGQQQVNVGKPFLGVVAGSDRHYWSGFNPSSSSHSQI 278
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 66106338 66108168 - Tan0020276.2 Tan03g0967 746471
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0967 278 MobiDBLite consensus disorder prediction 11 37 - -
Tan03g0967 278 ProSitePatterns Zinc finger Dof-type signature. 74 110 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Tan03g0967 278 Pfam Dof domain, zinc finger 71 126 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Tan03g0967 278 MobiDBLite consensus disorder prediction 11 52 - -
Tan03g0967 278 MobiDBLite consensus disorder prediction 117 142 - -
Tan03g0967 278 ProSiteProfiles Zinc finger Dof-type profile. 72 126 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Tan03g0967 278 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 53 204 IPR045174 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0967 Tan-Chr3:66106338 Tan08g1993 Tan-Chr8:72042638 1.50E-43 dispersed
Tan03g0966 Tan-Chr3:66106338 Tan03g0967 Tan-Chr3:66106338 1.40E-155 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26929 PF02701 zf-Dof 3.10E-31 No_clan Tan TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0967 - - - 0.0