Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0976 ATGACCGTGAACATAACCTCCATCAAAACCGCCTCCAATGGCGTCTGGCAAGGCGATAACCCACTCAATTTCGCCTTCCCTCTCTTAATCCTTCAATCCATTTTAATCCTCCTCCTCACCCGCTTCCTCGCCCTCCTTCTCAAGCCCCTCCGCCAGCCCAAAGTCATCGCCGAAATCGTCGGCGGAATTCTTCTGGGTCCTTCCGCTTTTGGGCGAAACAGAGCTTATTTACACCACATTTTTCCTCCCTGGAGTACTCCCATTCTCGAATCCGTCGCTAGTATCGGGTTGTTGTTCTTTTTGTTCCTTGTCGGACTCGAACTCGATCTGTCCTCCATTCGTCGCAGTGGACGGCGGGCTTTTGGAATCGCCCTCGCCGGAATCTCCGTCCCCTTTCTCTCTGGCATTGGCGTCGCGTTCGTTCTTCGTAAGACCGTCGACGGTGCCGATAAAGTCGGCTACGGTCAGTTTATTGTATTCATGGGAGTTGCTCTCTCTATCACCGCTTTTCCTGTTCTCGCTCGCATTTTAGCAGAGCTGAAACTTCTCACCACTGAAGTCGGCGAGACTGCTATGGCCGCTGCTGCCTTCAACGACGTAGCGGCCTGGATCCTTCTCGCACTCGCAGTCGCACTGGCTGGCAACGGCGACACCACCAACAAGAGTCCATTAGTTTCCATTTGGGTCCTACTCTCTGGGATTGGATTCGTCGTTTTCATGATGGTGGTGATCCGACCTGGAATGAAGTGGGTCGCACGGCAGTGCTCGTACGAGCACGATGCGGTCGACGAAGCATACATCTGTTTGACGTTGGTCGGGGTGTTGGTTTCAGGATTCGTGACGGATTTGATCGGAATTCATTCGATATTTGGGGGTTTTATATTTGGATTGACGGTGCCGAAGGGGGGAAGATTTGCGGAGAGATTGATAGAGAGGATTGAGGATTTTGTGTCGGGTCTTCTTCTTCCTCTGTATTTTGCGTCGAGTGGATTGAAGACGGACGTCGCGAAGATTAGAGGGGGAAAAGCGTGGGGGTTACTGGCGCTGGTTATATCGACGGCGTGTGCAGGGAAGATTCTGGCGACCTTTGTGGCGGCGATGGCGTTTCTGATGCCGGCGAGGGAGGCGCTGGCGTTGGGACTGCTTATGAATACTAAAGGCTTGGTTGAACTCATCGTGCTCAATATTGGCAAGGAGAAAAAGGTACTGAACGACGAAGTATTCGCCATTTTAGTGTTAATGGCACTATTCACAACCTTCATCACCACTCCAACCGTGATGGCAGTTTACAAGCCAGCCCGCGGCGGCACCACCCGAACCCACCGGAAACTCAAGGATCTCTCCGCCGCGGCGAACTCGACCGCCGACGCCTCGCTGCGTATCCTGGCCTGTCTCCACAGCTCGGGCAACGTACCCGCTCTGATAAGCCTGACCGAGTCAACTCGCAGCACAAAAAACTCGTCCCTGAAACTGTTCGTGATGCACTTGGTGGAGCTGACGGAGCGGTCCTCCTCCATCATGATGGTCCAGCGCGCCCGCAAGAACGGCTTCCCTTTCTTCGCCAGGTTCCGCAAGGCCGGCGAGTGGCACGACCAGATGGCCGGCGCTTTCCAGGCCTATAGGCAACTGGGTCAGGTCAAGGTCCGGCCCACCACGGCGGTTTCTTCCCTAGCCACCATGCACGAGGATATCTGCGACGTGGCGGACGCTAAGAGGGTGACGATGATCATCCTGCCGTTTCATCGGAATTGGAGGACGGTCGGCGGCGACGAGGAGGAGGAGGAGAATGTGGGCCATGGGTGGAGGGTTGTGAACCAACGGGTGCTCAAGACTGCGCCTTGCTCGGTGGCGGTTCTTGTGGACCGGGGCTTGGGGGCTAATGGGCCGCAGACGCCTGGGTTTGGGCCTGGGCCGGTGGGACAGAGGATTTGTGTGGTGTTTTTTGGTGGGCCTGATGATCGGGAGGCGTTGGAGTTGGGTGGCCGGATGGCGGAGCATCCGGCGGTGAAAGTCTCGGTGGTTAGGTTTCGGTGGTCGTCGCCGGCGAATGGGGTGGAGGGTAGTAATGTCATTTTGCGATCCGTGTATTCCAAATCTGGCGACAACCATTATAGCTTCTCCTCAACTCCAATCAACAGGGAAAAAGAAAAGGAGCTAGATGATGCAGCAATAGCAGAATTCAAAAGCAAATGGGATGTAACAGTTGAGTACACAGAGAAGGAGGCCAGCAACACGAACGTGATGGTCGAAGGGGTAGTGGCGATCGGAAAGGAAGGCGGTTACGACCTAATCGTGGTCGGGAAGGGTCGGGTTCCATCGAGCATGGTGGTGAAACTAGCAGACCGACCAGCAGAGCACGCCGAGCTCGGGCCAGTAGGGGACATATTGGCCAGCTCCGGCAGGGGAATAGTATCTTCAATACTAGTAATTCAACAACATGAAGGAGGAGCTCATGCAGAAGAAACTCAAGTTTTGAATAAGCAGCTTTTGTCAACCGATGAAGCTTCAATTAATGTATAA 2520 54.48 MTVNITSIKTASNGVWQGDNPLNFAFPLLILQSILILLLTRFLALLLKPLRQPKVIAEIVGGILLGPSAFGRNRAYLHHIFPPWSTPILESVASIGLLFFLFLVGLELDLSSIRRSGRRAFGIALAGISVPFLSGIGVAFVLRKTVDGADKVGYGQFIVFMGVALSITAFPVLARILAELKLLTTEVGETAMAAAAFNDVAAWILLALAVALAGNGDTTNKSPLVSIWVLLSGIGFVVFMMVVIRPGMKWVARQCSYEHDAVDEAYICLTLVGVLVSGFVTDLIGIHSIFGGFIFGLTVPKGGRFAERLIERIEDFVSGLLLPLYFASSGLKTDVAKIRGGKAWGLLALVISTACAGKILATFVAAMAFLMPAREALALGLLMNTKGLVELIVLNIGKEKKVLNDEVFAILVLMALFTTFITTPTVMAVYKPARGGTTRTHRKLKDLSAAANSTADASLRILACLHSSGNVPALISLTESTRSTKNSSLKLFVMHLVELTERSSSIMMVQRARKNGFPFFARFRKAGEWHDQMAGAFQAYRQLGQVKVRPTTAVSSLATMHEDICDVADAKRVTMIILPFHRNWRTVGGDEEEEENVGHGWRVVNQRVLKTAPCSVAVLVDRGLGANGPQTPGFGPGPVGQRICVVFFGGPDDREALELGGRMAEHPAVKVSVVRFRWSSPANGVEGSNVILRSVYSKSGDNHYSFSSTPINREKEKELDDAAIAEFKSKWDVTVEYTEKEASNTNVMVEGVVAIGKEGGYDLIVVGKGRVPSSMVVKLADRPAEHAELGPVGDILASSGRGIVSSILVIQQHEGGAHAEETQVLNKQLLSTDEASINV 839
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 66221954 66228234 + Tan0009158.1 Tan03g0976 746480

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0976 839 Gene3D - 449 790 - -
Tan03g0976 839 PANTHER CATION/H + ANTIPORTER 9 820 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Tan03g0976 839 Pfam Sodium/hydrogen exchanger family 37 426 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Tan03g0976 839 Gene3D - 28 435 IPR038770 -
Tan03g0976 839 FunFam Cation/H(+) antiporter 15 28 436 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0976 K26731 - - csv:101207589 1335.09
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0976 Tan-Chr3:66221954 Tan07g0862 Tan-Chr7:14615747 3.90E-180 dispersed
Tan03g0976 Tan-Chr3:66221954 Tan03g0979 Tan-Chr3:66261851 1.10E-288 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi8g700 Blo01g01126 . Bda01g00243 . . . . . . . Cma03g00436 . Car03g00383 . Sed14g0469 . . Bhi03g01986 Tan03g0976 Cmetu08g1910 . . . . Cla04g00826 Cam04g0889 Cec04g0974 Cco04g1032 Clacu04g0882 Cmu04g0873 Cre04g0930 . Cone10ag0299 . . . Csa04g01471 Chy08g00771 . . . . . . . Bma01g01881 . . Cmo03g00449 . . . . . . Cpe19g00367 . . . . . . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan07g0862 . 11 815 Antiporter Super Family AT2G13620 72.5 0.0e+00 1167.1
Tan01g1130 . 11 771 Antiporter Super Family AT2G13620 50.7 3.3e-208 722.6
Tan03g0976 . 75 838 Antiporter Super Family AT3G53720 68.4 4.1e-285 978.0
Tan03g0979 . 78 786 Antiporter Super Family AT3G53720 58.3 4.0e-224 775.4
Tan01g1130 . 83 768 Antiporter Super Family AT3G53720 50.6 2.7e-180 629.8
Tan01g1131 . 1 797 Antiporter Super Family AT5G41610 69.6 1.9e-312 1068.9
Tan01g1132 . 1 797 Antiporter Super Family AT5G41610 69.6 1.9e-312 1068.9
Tan01g1128 . 1 792 Antiporter Super Family AT5G41610 67.2 1.0e-302 1036.6
Tan01g1129 . 1 792 Antiporter Super Family AT5G41610 67.2 1.0e-302 1036.6
Tan01g1130 . 1 771 Antiporter Super Family AT5G41610 68.7 1.0e-302 1036.6
Tan01g1130 . 9 786 Antiporter Super Family AT4G23700 67.4 4.1e-299 1024.6
Tan01g1128 . 10 797 Antiporter Super Family AT4G23700 63.5 2.1e-287 985.7
Tan01g1129 . 10 797 Antiporter Super Family AT4G23700 63.5 2.1e-287 985.7
Tan01g1131 . 9 796 Antiporter Super Family AT4G23700 62.9 2.2e-281 965.7
Tan01g1132 . 9 796 Antiporter Super Family AT4G23700 62.9 2.2e-281 965.7
Tan01g1131 . 3 779 Antiporter Super Family AT3G17630 64.0 8.0e-276 947.2
Tan01g1132 . 3 779 Antiporter Super Family AT3G17630 64.0 8.0e-276 947.2
Tan01g1130 . 4 769 Antiporter Super Family AT3G17630 64.8 1.3e-273 939.9
Tan01g1128 . 3 779 Antiporter Super Family AT3G17630 62.9 2.2e-273 939.1
Tan01g1129 . 3 779 Antiporter Super Family AT3G17630 62.9 2.2e-273 939.1
Tan03g0976 . 8 839 Antiporter Super Family AT3G17630 50.4 2.3e-206 716.5
Tan01g1128 . 4 787 Antiporter Super Family AT1G64170 57.0 1.2e-239 827.0
Tan01g1129 . 4 787 Antiporter Super Family AT1G64170 57.0 1.2e-239 827.0
Tan01g1130 . 11 781 Antiporter Super Family AT1G64170 58.6 4.7e-239 825.1
Tan01g1131 . 1 784 Antiporter Super Family AT1G64170 56.3 1.1e-235 813.9
Tan01g1132 . 1 784 Antiporter Super Family AT1G64170 56.3 1.1e-235 813.9
Tan07g0862 . 11 815 Antiporter Super Family AT2G13620 72.5 0.0e+00 1167.1
Tan01g1130 . 11 771 Antiporter Super Family AT2G13620 50.7 3.3e-208 722.6
Tan01g1128 . 4 787 Antiporter Super Family AT1G64170 57.0 1.2e-239 827.0
Tan01g1129 . 4 787 Antiporter Super Family AT1G64170 57.0 1.2e-239 827.0
Tan01g1130 . 11 781 Antiporter Super Family AT1G64170 58.6 4.7e-239 825.1
Tan01g1131 . 1 784 Antiporter Super Family AT1G64170 56.3 1.1e-235 813.9
Tan01g1132 . 1 784 Antiporter Super Family AT1G64170 56.3 1.1e-235 813.9
Tan01g1130 . 9 786 Antiporter Super Family AT4G23700 67.4 4.1e-299 1024.6
Tan01g1128 . 10 797 Antiporter Super Family AT4G23700 63.5 2.1e-287 985.7
Tan01g1129 . 10 797 Antiporter Super Family AT4G23700 63.5 2.1e-287 985.7
Tan01g1131 . 9 796 Antiporter Super Family AT4G23700 62.9 2.2e-281 965.7
Tan01g1132 . 9 796 Antiporter Super Family AT4G23700 62.9 2.2e-281 965.7
Tan01g1131 . 1 797 Antiporter Super Family AT5G41610 69.6 1.9e-312 1068.9
Tan01g1132 . 1 797 Antiporter Super Family AT5G41610 69.6 1.9e-312 1068.9
Tan01g1128 . 1 792 Antiporter Super Family AT5G41610 67.2 1.0e-302 1036.6
Tan01g1129 . 1 792 Antiporter Super Family AT5G41610 67.2 1.0e-302 1036.6
Tan01g1130 . 1 771 Antiporter Super Family AT5G41610 68.7 1.0e-302 1036.6
Tan01g1131 . 3 779 Antiporter Super Family AT3G17630 64.0 8.0e-276 947.2
Tan01g1132 . 3 779 Antiporter Super Family AT3G17630 64.0 8.0e-276 947.2
Tan01g1130 . 4 769 Antiporter Super Family AT3G17630 64.8 1.3e-273 939.9
Tan01g1128 . 3 779 Antiporter Super Family AT3G17630 62.9 2.2e-273 939.1
Tan01g1129 . 3 779 Antiporter Super Family AT3G17630 62.9 2.2e-273 939.1
Tan03g0976 . 8 839 Antiporter Super Family AT3G17630 50.4 2.3e-206 716.5
Tan03g0976 . 75 838 Antiporter Super Family AT3G53720 68.4 4.1e-285 978.0
Tan03g0979 . 78 786 Antiporter Super Family AT3G53720 58.3 4.0e-224 775.4
Tan01g1130 . 83 768 Antiporter Super Family AT3G53720 50.6 2.7e-180 629.8
Tan06g0598 . 47 790 Antiporter Super Family AT3G52080 54.3 2.1e-231 799.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004121 1 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 3 3 1 2 1 2 2 43