Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0979 ATGGGCGTGAATGTAACTGGAAGTGCGATCAAAACGGCGTCGGAAGGGGTCTGGCAAGGCGACAACCCACTTGATTTCGCCTTCCCTCTCTTAATCGTTCAGTCCATTTTGATCCTCTCCCTCACTCGCTTCCTCACTCTCCTCCTCAAACCCCTCCGCCAGCCCAAAGTCACAGCCGAGATTCTCGGTGGGATTTTGTTGGGGCCATCCGCCTCCGGTCGGAGCAAGCTGTTTCTCGATCGGATTTTCCCTCCATGGAGTACTCCCATTCTCGAATCCATCGCCAGCATCGGCTTACTCTTCTTCCTCTTTCTCGTCGGCCTCGAGCTCGATCTCTCCTCCATCCGCCGCGGCGGAAGAAGAGCTTTCTGCATAGCATTCGCCGGAATTTCCGCCACCTTCCTCGGTGGTGTCGGCGTCACCTTCGTCCTCCGAAACACCGTCGATGGCACCGATAAAGTCGGCTATGCCCAGTTCCTTGTCTTCATGGGTGTCTCTCTCTCCATCACCGCCTTTCCTGTTTTAGCCCGCATTCTAGCCGAGCTCAAACTCCTCACCACTCAAGTCGGAGAGATCGCCATGGCCGCTGCCGCCTTCAACGACGTCGCCGCCTGGATACTTCTCGCCCTAGCCGTTGCTCTCACTGGTGGGGCCCATAAGAGTGCATTGACGTCCGTATGGGTCCTACTTTCAGGAGTTGGGTTTGTGATTTTCATGATGGTAGCCATCCGACCAGCGATGGAACGGGTGGCGGGGCGGTTCAGGCCGGAGCAGAAGGCGGCGGAGGAGATGTACATATGTGTAACGTTAATGGGAGTTTTGATTTCGGGGCTGGTGACGGATTTCATCGGAATCCACTCGATATTCGGGGGATTCATATTCGGGCTGACGATTCCAAAAGGGGGAAGATTTGCAGAGAGATTAATGGAGAGAATAGAGGATTTCGTATCGGGTCTTCTTCTTCCTCTATACTTTGCATCGAGTGGGTTGAAGACGGACATAAGCAAGATCCATGGAGGAAAGGCTTGGGGATTGCTGGCGTTGCTCATAACCACCGCCTGCGCCGGCAAGATTCTGGCCACGTTTCTCGTTTCCATGGCGTTTCTTATGCCACCCAGAGACTCCCTCGCCTTGGGCCTTCTTATGAACACCAAAGGCTTGGTCGACCTCATCGTCCTCAACATCGGCAAGGACAAGAAGGTTCTTAACGATGAAGTATTTGCGCTTTCGGTGCTAATGGCGCTTTTCACTACTTTCATGACCACCCCTTCTTTGATCGCGATTTACAAGCCGAGCGGCGAGGTGTCGAGCAGCACCCACCGGAAACTATGTTGCGAGCAGAAAGTGGATGAGCTTCGAATCCTGGCCTGCGTCCATGGGTCTAAAAATATACCATCCTTAACAAACTTGATCGAGTCAACACGAAGCACCAAAAATTGTTCTCTCAAAGTTTTCGCTATGCGGCTGGTCGAGCTCACCGAGCGCTCCTCCTCCATTATCATGGTCCAACGAGCTCGCAAGAATGGATTCCCTTTCTTCACAAGGTTTCGCAAAGGCGAATGGCAGGACCAATTGATTGGAGCGTTTCAGTATCATCAGCCCAACACCGACTTGGGCCGTGTCAAGATTCGGCCCACTACCACCATCTCTTCCCTCTTAACCATGCATCAAGATATCTGCCACGTGGCAGAGGATAAGAGGGTGTCGCTCATCATCTTGCCCTGGAGTAGTAGCGTCGACGAGGAGTACAATAATAAGGTTATGAGTTGTGGTTGGCGGCTGGTGAACCAGAGGGTGTTGGACAATGCGCCCTGCTCGGTGGCGGTTCTTGTCGATCGTGGATTTGGGGCTAACCTGGCTCCAAGTATTTGTGTGCTCTTTTTTGGTGGGCCTGACGATTGTGAGGCCCTTGAGTTGGCCCAACGGATGACGGAGCATCCTGCAGTGAAGCTTACAGTCGTCAGGTTCAAAGGCCCTATGGAGGAGGGTAAACATGTCATTTTGCAACCCATGCCTCCAGATTCAGATTCAGATTCAGATTCTGATTCTGATATAAAACAGCAGGTAGATGATGAGAGAGCAATGGCAGAATTTAGAAGCAATTGTGGTGGTCGAACAGTTGAGTACATTGAGAAAGAGGTCAGTCGCGACCACATTATTGAGAGCGTGGTTGCCATCGGACAAGAAGGCGCTTACGACCTAATCCTCGTTGGAAAGGGTCGATTTTCGTTAACCATGGTGGCCGAATTAGCAGACCGCCAACCCCATCTCACCGAGCTCGGGCCAATTGGCGACATACTGGTGAGCGCCCACTCCCCTGGGAGAATAGCACCTTCAGTACTAGTAATTCAACAACATTATTGA 2364 52.28 MGVNVTGSAIKTASEGVWQGDNPLDFAFPLLIVQSILILSLTRFLTLLLKPLRQPKVTAEILGGILLGPSASGRSKLFLDRIFPPWSTPILESIASIGLLFFLFLVGLELDLSSIRRGGRRAFCIAFAGISATFLGGVGVTFVLRNTVDGTDKVGYAQFLVFMGVSLSITAFPVLARILAELKLLTTQVGEIAMAAAAFNDVAAWILLALAVALTGGAHKSALTSVWVLLSGVGFVIFMMVAIRPAMERVAGRFRPEQKAAEEMYICVTLMGVLISGLVTDFIGIHSIFGGFIFGLTIPKGGRFAERLMERIEDFVSGLLLPLYFASSGLKTDISKIHGGKAWGLLALLITTACAGKILATFLVSMAFLMPPRDSLALGLLMNTKGLVDLIVLNIGKDKKVLNDEVFALSVLMALFTTFMTTPSLIAIYKPSGEVSSSTHRKLCCEQKVDELRILACVHGSKNIPSLTNLIESTRSTKNCSLKVFAMRLVELTERSSSIIMVQRARKNGFPFFTRFRKGEWQDQLIGAFQYHQPNTDLGRVKIRPTTTISSLLTMHQDICHVAEDKRVSLIILPWSSSVDEEYNNKVMSCGWRLVNQRVLDNAPCSVAVLVDRGFGANLAPSICVLFFGGPDDCEALELAQRMTEHPAVKLTVVRFKGPMEEGKHVILQPMPPDSDSDSDSDSDIKQQVDDERAMAEFRSNCGGRTVEYIEKEVSRDHIIESVVAIGQEGAYDLILVGKGRFSLTMVAELADRQPHLTELGPIGDILVSAHSPGRIAPSVLVIQQHY 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 66261851 66265888 + Tan0011290.1 Tan03g0979 746483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0979 787 Gene3D - 30 434 IPR038770 -
Tan03g0979 787 PANTHER CATION/H + ANTIPORTER 11 786 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Tan03g0979 787 MobiDBLite consensus disorder prediction 665 687 - -
Tan03g0979 787 Pfam Sodium/hydrogen exchanger family 41 425 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Tan03g0979 787 FunFam Cation/H(+) antiporter 15 30 436 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0979 Tan-Chr3:66261851 Tan07g0862 Tan-Chr7:14615747 2.60E-170 dispersed
Tan03g0976 Tan-Chr3:66221954 Tan03g0979 Tan-Chr3:66261851 1.10E-288 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0979 K26731 - csv:101207589 978.008