Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g0990 ATGAATAGCCAAGTTAGCCAATGGTGTGTCTCAGCCAAGCCTTTTTTTGCTGTGGTGTTCTTGCAGTTTGGGCTTGCAGGAATGGACATTCTGTCTAAAGCAGCTCTCAACCAAGGAATGAGCAACTATGTTCTTGTTGTCTATCGCCATGCAGTTGCCACAATTGTTATAGCTCCTTTTGCACTGATTTTTGACAAGAAGGTCAGACCAAAGATGACAGTCTCAGTCTTTGCTAAGTTAATGGTGCTCAGCTTGCTAGAGCCTGTGATTGATCAGAACTTATATTTCTTGGGAATGAAGTACACAACAGCAACTTTTGCAGCTGCTATGTGCAATATTCTCCCTGCCATAACCTTTGTAATGGCTTGGATCCTCAGGCTTGAGAAGGTTAAAATCAAAAGCATCAGAAGCCAAGCTAAGTTAGTGGGAACCATAGCAACAGTTGGAGGAGCCATGATAATGACACTGATAAAGGGCCCAATTTTAGAGCTATTTTGGGTGAAAGAAAGAGCAAACCAACAACAACAAAGGGGTGATATCAGCCTTCAACACACAATCAAAGGTTCAATTATGATCACAATTGGCTGTTTCAGCTGGGCCTGCTTCATGATTCTTCAGGCAATCACTTTGAAAGCTTACCCGGCTGAGCTTTCTCTTACGGCTTGGATCTGCCTGTTGGGCACTGCGGAAGGCACTGTCTTGGCTTTGGTGATGGAAAGAGGAAACGCCGCCGTTTGGTCCATTACTTGGGGAACTAAATTGCTTGCCGCCGTTTATAGTGGGATATTTTGTTCAGGACTTGCTTATTACATTCAAGGAATAGTTATGAAAGACAAAGGACCTGTGTTTGTGACTGCCTTTAGCCCATTGAGTATGGTCATTGTGGCCATTATGAGTTCGTTTATTTTGGGCGAGCGTCTTTATTTTGGAAGGGTACTTGGAGCTGTTGTGATAATTGTGGGGCTATACCTTGTTGTTTGGGGCAAAAATAAAGATGGGAATTCTTCAAGTGAAGATTTGACATTGCCCACCAAACAAACAAAAGAAATGGAAGCCAACAAGATGGAAAGTTTAACAATTGAGGCATCTAATTCTATTGATCTAAAGAATGAGCAAAAATAA 1122 42.16 MNSQVSQWCVSAKPFFAVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPKMTVSVFAKLMVLSLLEPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWILRLEKVKIKSIRSQAKLVGTIATVGGAMIMTLIKGPILELFWVKERANQQQQRGDISLQHTIKGSIMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVLALVMERGNAAVWSITWGTKLLAAVYSGIFCSGLAYYIQGIVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRVLGAVVIIVGLYLVVWGKNKDGNSSSEDLTLPTKQTKEMEANKMESLTIEASNSIDLKNEQK 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 66319681 66326876 + Tan0014022.1 Tan03g0990 746494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g0990 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Tan03g0990 373 PANTHER WAT1-RELATED PROTEIN 17 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan03g0990 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 331 - -
Tan03g0990 373 Pfam EamA-like transporter family 23 135 IPR000620 GO:0016020(InterPro)
Tan03g0990 373 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0990 Tan-Chr3:66319681 Tan04g0315 Tan-Chr4:2556353 7.40E-115 dispersed
Tan07g0162 Tan-Chr7:4048129 Tan03g0990 Tan-Chr3:66319681 9.00E-65 transposed
Tan11g0761 Tan-Chr11:6419484 Tan03g0990 Tan-Chr3:66319681 3.00E-100 wgd
Tan03g0990 Tan-Chr3:66319681 Tan04g0312 Tan-Chr4:2530268 1.00E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g0990 - - - 0.0