Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1012 ATGAGTGCTAATGCCGATAGGCACAAAGTGAAAGAGTTAAGAGAACCAAATCACCACGTGCAGGATGGGAATGGAAGCGTGAACGATGGTGTAACTGGAAGGGAACAGAGCCCGGTAGAGGAAAATGAGTTGAAGATCAATGGATTAACTAGAAATGCAGAAGCTGGACGAAAACCTACTGTTCAAGCCCAGGACATTCTACAAATACAACAGCAACAGCAGCCTCAAGGATCTATGGTTTGCTGGGAGAGATTTCTACATCTTAGGTCCCTCAAGGTTTTGCTTGTAGAAAATGATGACTCCACTCGGCATCTAGTCACTGCACTGCTTCGTAATTGCAGTTATGAAGTTATTGCCGCTGCAAATGGACTACATGCATGGAAGATGCTAGAAGATCTGACAAATCACATAGATCTTGTCTTAACAGAGGTGGTCATGCCTTGCTTATCTGGCATTGGTCTCTTAAGCAAGATTATGAACCATAAAACAAGGAAGAATATACCTGTAATCATGATGTCTTCTCATGACTCGATGGGTTTAGTCTTTAAATGTTTGTCAAAGGGTGCTGTCGATTTTTTAGTGAAGCCGATTCGGAAGAATGAGCTTAAAAACCTTTGGCAACATGTTTGGAGAAGATGCCATAGTTCTAGCGGTAGTGGAAGTGAGAGTGGCACCCAGACCCAAAAATCTGTGAAGTCAAAAAGTGTTGAAAAATCAGACAACAACACCGGGAGCAATGATGAAGAAGAAGACAATGAGAGCATTGGTTTCAATATTGGAGATGGAAGCGACGATGGTAGTGGCACACAGAGTTCTTGGACCAAGCAAGCTATAGAGGTTGAAAGCCCTAGACCAGTATCTGCATCAGCATGGGATCAAAAACGTGAACGTCCTGATAGTACTTGTGCTCAAGTTGTCCACTCAAATGCTGATGCATTTGCTAATAATGTGCCACCTGTTTTGACAGCCGAGTGCCAGGTGCAGAAAAAGCAACTTGAAACCGTTACCATGGGTAAAGTTGAATTTGGCGTGCACAGAAATCTAGATTTACAACTTGAACTGTCTACTGAACATCCAACCAAGCTAGTTAACAGAAAACAGAATATTATGCTTGAGATAGGATCCAGTGGATTTAATGAGCAGTTCAACAAAGGACATCTTGACCTCAACTCTGAGAGCCCATCCAGCAAACTAAAGTACGAACAAACAACTGTTACTGGTCTTGCTACCAATCTTACTGATTCTAAGATGGATGTCACTGTGTTTGAGGCACCGAACAATCATCCCAAGATCACAGACTTTAAGAATAAAGATGTTACAGATTCAGAAGAATTTCCATCCCTTGAGCTTGGATTAAAAAGGCTTAGAGGAGTTCAAATGACAGGGAAAGCGGTCCAAGATGAGCGGAATGTTTTGAGACGCTCAGATTCTTCAGCTTTTTCTAGGTACAATGCTGGCTCAAATTCTAACAAGACTCCAACTGGGAATGCCGGATGTAACTCTCCGCATGTTAATGGTTTAGAAGTTACAACCCAAGAGAACATGCAAGATATTCGATCTCATTCAAGTAGTAATCCTCCCAATCAATGCTCAAACGGAGATAGCAATAATATTGACATGGGGTCCACTACGAATAATGTATTTTCCAAGTCCATAGTTACTAATAACAAGTCAACAATGGCATCAACAGTCAACTGTTTACACCCGTCGGCAGCTTTCCAACCTATTAAGAATGACAGTCTATCTGTTCCTCAGCAAGCTGATAAGGTCAATAATGTTACAACTACAACAATGCAAGCTCGGTCTAATTGTGCGCACAGGGAATCTCAAATTCAGCAACTTTGTGACCCGTATGATCACACTCTTCAGCTTGCCCACAATATTCAACAAATATCATCTGAGCATAATGATTTTTCATTAAAGAAAATATCAGCTGCCACGCATTGTGGGTCAACCAATGTGTTAAATGGCCCTGTAGAAGGTAATGCAGCAAATTATAGTGTGAACGGTAGCGCCTCAGGCAGTAACCATGGAAGCAATGGCCAAAATGGGAGCAGCACTGCAGTAAATGCTGGAGGGCTGAATATGGAAAGTGATAATGGAATAGGTCGGAAAAGCCGAAGTGAGGATGCCAGTGGAAGTGGAAGTGGAAGTGGAAGTGGAAACAAAGTGGACCAAGACAAAGTTTCACAAAGGGAAGCAGCCTTGACAAAGTTTCGCCAGAAAAGGAAGGAAAGATGCTTCCGTAAAAAGGTCCGATACCAAAGCAGAAAGAGATTAGCAGAACAGAGACCCCGTGTCAGGGGACAGTTTGTGAGACAAAACACGAGCGAAAACACAAGCAATGTCGGAGATGGCTAA 2361 42.48 MSANADRHKVKELREPNHHVQDGNGSVNDGVTGREQSPVEENELKINGLTRNAEAGRKPTVQAQDILQIQQQQQPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEVVMPCLSGIGLLSKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSVEKSDNNTGSNDEEEDNESIGFNIGDGSDDGSGTQSSWTKQAIEVESPRPVSASAWDQKRERPDSTCAQVVHSNADAFANNVPPVLTAECQVQKKQLETVTMGKVEFGVHRNLDLQLELSTEHPTKLVNRKQNIMLEIGSSGFNEQFNKGHLDLNSESPSSKLKYEQTTVTGLATNLTDSKMDVTVFEAPNNHPKITDFKNKDVTDSEEFPSLELGLKRLRGVQMTGKAVQDERNVLRRSDSSAFSRYNAGSNSNKTPTGNAGCNSPHVNGLEVTTQENMQDIRSHSSSNPPNQCSNGDSNNIDMGSTTNNVFSKSIVTNNKSTMASTVNCLHPSAAFQPIKNDSLSVPQQADKVNNVTTTTMQARSNCAHRESQIQQLCDPYDHTLQLAHNIQQISSEHNDFSLKKISAATHCGSTNVLNGPVEGNAANYSVNGSASGSNHGSNGQNGSSTAVNAGGLNMESDNGIGRKSRSEDASGSGSGSGSGNKVDQDKVSQREAALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQFVRQNTSENTSNVGDG 786
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 66538547 66547202 + Tan0020789.1 Tan03g1012 746516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1012 786 MobiDBLite consensus disorder prediction 668 786 - -
Tan03g1012 786 Gene3D - 90 317 - -
Tan03g1012 786 ProSiteProfiles Response regulatory domain profile. 92 210 IPR001789 GO:0000160(InterPro)
Tan03g1012 786 SMART REC_2 91 206 IPR001789 GO:0000160(InterPro)
Tan03g1012 786 MobiDBLite consensus disorder prediction 263 278 - -
Tan03g1012 786 MobiDBLite consensus disorder prediction 1 19 - -
Tan03g1012 786 PANTHER TWO-COMPONENT RESPONSE REGULATOR 77 418 IPR045279 GO:0009736(InterPro)
Tan03g1012 786 MobiDBLite consensus disorder prediction 468 543 - -
Tan03g1012 786 CDD psREC_PRR 93 196 - -
Tan03g1012 786 MobiDBLite consensus disorder prediction 668 694 - -
Tan03g1012 786 MobiDBLite consensus disorder prediction 707 725 - -
Tan03g1012 786 MobiDBLite consensus disorder prediction 769 786 - -
Tan03g1012 786 MobiDBLite consensus disorder prediction 476 543 - -
Tan03g1012 786 SUPERFAMILY CheY-like 89 215 IPR011006 -
Tan03g1012 786 FunFam Two-component response regulator-like PRR37 91 249 - -
Tan03g1012 786 ProSiteProfiles CCT domain profile. 732 774 IPR010402 GO:0005515(InterPro)
Tan03g1012 786 Pfam CCT motif 732 774 IPR010402 GO:0005515(InterPro)
Tan03g1012 786 MobiDBLite consensus disorder prediction 21 35 - -
Tan03g1012 786 MobiDBLite consensus disorder prediction 215 232 - -
Tan03g1012 786 Pfam Response regulator receiver domain 93 204 IPR001789 GO:0000160(InterPro)
Tan03g1012 786 MobiDBLite consensus disorder prediction 215 300 - -
Tan03g1012 786 MobiDBLite consensus disorder prediction 1 57 - -
Tan03g1012 786 MobiDBLite consensus disorder prediction 726 741 - -
Tan03g1012 786 MobiDBLite consensus disorder prediction 742 757 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1012 Tan-Chr3:66538547 Tan07g0542 Tan-Chr7:9036205 6.00E-42 dispersed
Tan03g1012 Tan-Chr3:66538547 Tan09g2096 Tan-Chr9:71348710 1.90E-11 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26934 PF00072 Response_reg 3.00E-21 CL0304 Tan TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1012 K12129 - csv:101210765 1294.64