Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g1055 | ATGTCTAAGGATGTTGAAGCCGGAGGCGGTGGTGGGTTTCCCGCCGGCGACTACCTCGACCAGCCTCCAGCTCCGATGTTCGATGCCGACGAGCTTTTGCGGTGGTCGTTTTACAGAGCCGTCATCGCTGAGTTCATTGCCGCGCTTTTGTTTCTGTACGTCGGAGTTCTCACCGTGATTGGTAATCAGAGTCAGTCTGGCGGCGTCGGTGTTCTCGGTATCGCTTGGGCGTTCGGTGGCACCATTTTCGTTCTCGTTTACTGTACCGCCGGCATATCTGGAGGACATATTAATCCAGCGGTAACATTTGGGCTGTTTTTGGGTCGGAAGGTTTCATTGGTCAGAGCTGTACTGTACATAGCGGCTCAGTGTTTGGGAGCCATTTGTGGGTGTGGGCTGGTCAAGTCATTAAAGAAGGCTAACTTCCACGCCTTCGGCGGTGGAGCCACCGAGCTCGCCGACGGTTTCAGCCCCGGCGCCGGCCTCGCCGCCGAGATCATCGGAACCTTCGTTCTTGTATACACTGTCTTCTCTGCCACCGATCCCAAGAGAAAAGCCAGAGATTCCCACGTTCCTGTTTTGGCGCCACTCCCAATTGGGTTCGCGGTGTTCGTGGTGAATTTGGCCACCATTCCGGTCACCGGCGCCGGTATTAACCCGGCTCGAAGCTTTGGCTCTGCAGTGATGTTCAACAAACACAAGGCTTGGGATAACCATTGGATATTCTGGGTTGGACCTTTCATTGGAGCTGCAATGGCTGCAATGTACCATGAATTTGTTTTGAGAGGAGGAGCAGCTAAGACCTTCAGATCCTTCAGGAGTTCTTCAATTTAA | 834 | 53.6 | MSKDVEAGGGGGFPAGDYLDQPPAPMFDADELLRWSFYRAVIAEFIAALLFLYVGVLTVIGNQSQSGGVGVLGIAWAFGGTIFVLVYCTAGISGGHINPAVTFGLFLGRKVSLVRAVLYIAAQCLGAICGCGLVKSLKKANFHAFGGGATELADGFSPGAGLAAEIIGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGFAVFVVNLATIPVTGAGINPARSFGSAVMFNKHKAWDNHWIFWVGPFIGAAMAAMYHEFVLRGGAAKTFRSFRSSSI | 277 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 66822569 | 66823999 | - | Tan0017798.1 | Tan03g1055 | 746559 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g1055 | 277 | Pfam | Major intrinsic protein | 32 | 257 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1055 | 277 | PRINTS | Major intrinsic protein family signature | 39 | 58 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1055 | 277 | PRINTS | Major intrinsic protein family signature | 115 | 134 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1055 | 277 | PRINTS | Major intrinsic protein family signature | 78 | 102 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1055 | 277 | PRINTS | Major intrinsic protein family signature | 240 | 260 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1055 | 277 | PRINTS | Major intrinsic protein family signature | 164 | 182 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1055 | 277 | PRINTS | Major intrinsic protein family signature | 200 | 222 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1055 | 277 | ProSitePatterns | MIP family signature. | 96 | 104 | IPR022357 | - | |
Tan03g1055 | 277 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 3 | 273 | IPR034294 | GO:0005886(PANTHER)|GO:0015250(PANTHER) | |
Tan03g1055 | 277 | NCBIfam | MIP family channel protein | 43 | 256 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1055 | 277 | FunFam | Probable aquaporin PIP1-2 | 24 | 276 | - | - | |
Tan03g1055 | 277 | SUPERFAMILY | Aquaporin-like | 31 | 262 | IPR023271 | - | |
Tan03g1055 | 277 | CDD | MIP | 39 | 260 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1055 | 277 | Gene3D | Glycerol uptake facilitator protein. | 24 | 277 | IPR023271 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g1055 | Tan-Chr3:66822569 | Tan03g1062 | Tan-Chr3:66863529 | 3.00E-121 | dispersed | |
Tan03g1055 | Tan-Chr3:66822569 | Tan03g1058 | Tan-Chr3:66835122 | 6.30E-119 | proximal | |
Tan05g1199 | Tan-Chr5:11863147 | Tan03g1055 | Tan-Chr3:66822569 | 2.00E-15 | transposed | |
Tan11g0853 | Tan-Chr11:7002074 | Tan03g1055 | Tan-Chr3:66822569 | 9.10E-113 | wgd | |
Tan03g1055 | Tan-Chr3:66822569 | Tan05g0256 | Tan-Chr5:1952043 | 1.70E-108 | wgd | |
Tan03g1055 | Tan-Chr3:66822569 | Tan08g1884 | Tan-Chr8:71178168 | 2.40E-110 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g1055 | K09872 | - | csv:101215842 | 497.278 |