Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g1062 | ATGTCTAAGGATCTTGAAGCCGGTGGGTTCGCCGCCAAGGACTACCAAGACCTACCTCCAGCCCCACTGATCGACGCCGAGGAGTTCACTCAATGGTCATTTTACAGAGCCATCATCGCCGAGTTCGTTGCCACGCTTCTCTTCTTGTACGTCACTGTCCTCACTGTTATTGGCTATAGCAACCAATCCGACACCAAAAACGGCGGCCAAATATGCGGCGGCGTCGGCATTCTCGGCATTGCTTGGGCATTCGGTGGCATGATCTTCGTCCTCGTCTACTGCACCGCTGGAATTTCCGGAGGGCATATTAACCCGGCAGTGACTTTTGGGTTGTTTTTGGCTCGGAAAGTGTCTCTAGTTAGAGCAGTTCTATACATGACGGCTCAATGTTTGGGCGCCATTTGCGGGTGTGCGTTGGTGAAATCGTTCCAGAAGGCTCATTACAATGAGTACGGCGGTGGAGCCAATTCCCTCGCGGATGGATACAGCACCGGCACCGGCTTGGCCGCTGAGATCATCGGAACTTTCGTTCTTGTTTACACAGTCTTCTCTGCCACTGACCCCAAGAGGAACGCTAGAGATTCTCACGTTCCTGTTTTGGCGCCACTCCCAATTGGGTTCGCGGTGTTTATTGTTCATTTAGCCACCATCCCGATCACTGGCACCGGCATCAACCCAGCTCGAAGCTTTGGAGCTGCTGTGATCTTTAACAAAGACAAGCAGTGGGATGACCAGTGGATCTTTTGGGTCGGACCCTTCATTGGAGCTGCAATTGCCGCAATTTATCACCAAATCATATTGAGGGCTGGTGCAGTTAAAGCTCTGGGATCGTTCAGAAGTTCCACCGCTGTATAA | 855 | 51.93 | MSKDLEAGGFAAKDYQDLPPAPLIDAEEFTQWSFYRAIIAEFVATLLFLYVTVLTVIGYSNQSDTKNGGQICGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVLYMTAQCLGAICGCALVKSFQKAHYNEYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSFGAAVIFNKDKQWDDQWIFWVGPFIGAAIAAIYHQIILRAGAVKALGSFRSSTAV | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 66863529 | 66865064 | + | Tan0013376.1 | Tan03g1062 | 746566 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g1062 | 284 | NCBIfam | MIP family channel protein | 40 | 262 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1062 | 284 | CDD | MIP | 36 | 266 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1062 | 284 | PRINTS | Major intrinsic protein family signature | 84 | 108 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1062 | 284 | PRINTS | Major intrinsic protein family signature | 121 | 140 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1062 | 284 | PRINTS | Major intrinsic protein family signature | 246 | 266 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1062 | 284 | PRINTS | Major intrinsic protein family signature | 170 | 188 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1062 | 284 | PRINTS | Major intrinsic protein family signature | 36 | 55 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1062 | 284 | PRINTS | Major intrinsic protein family signature | 206 | 228 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1062 | 284 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 6 | 280 | IPR034294 | GO:0005886(PANTHER)|GO:0015250(PANTHER) | |
Tan03g1062 | 284 | SUPERFAMILY | Aquaporin-like | 28 | 268 | IPR023271 | - | |
Tan03g1062 | 284 | ProSitePatterns | MIP family signature. | 102 | 110 | IPR022357 | - | |
Tan03g1062 | 284 | FunFam | Probable aquaporin PIP1-2 | 21 | 282 | - | - | |
Tan03g1062 | 284 | Gene3D | Glycerol uptake facilitator protein. | 21 | 284 | IPR023271 | - | |
Tan03g1062 | 284 | Pfam | Major intrinsic protein | 28 | 263 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g1055 | Tan-Chr3:66822569 | Tan03g1062 | Tan-Chr3:66863529 | 3.00E-121 | dispersed | |
Tan03g1060 | Tan-Chr3:66846829 | Tan03g1062 | Tan-Chr3:66863529 | 4.30E-127 | dispersed | |
Tan03g1062 | Tan-Chr3:66863529 | Tan11g0853 | Tan-Chr11:7002074 | 4.00E-129 | dispersed | |
Tan03g1061 | Tan-Chr3:66855131 | Tan03g1062 | Tan-Chr3:66863529 | 1.80E-158 | tandem | |
Tan03g1062 | Tan-Chr3:66863529 | Tan03g1063 | Tan-Chr3:66869326 | 2.10E-133 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g1062 | K09872 | - | csv:101215366 | 534.643 |