Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g1076 | ATGGAATCTAATTCTCCTAGATGGAGATCAATGACAGTAAGGTTCCAGGACGAGGAACGCCTCAAGGACGGAGAAGCGAAGAGGAGAAAGAAAGAGGTGGTCGGAGAATCGTCGTCGAGAGTGTTTTCGGAGGATTACGACGTGGTGGATCGGATGGTATTGGATCCAAGGTTGCCAATTTTGAACAGATGGAACAGGGTTTTTTTGGTGGCTTGTTTGGTGTCGCTATTTGTGGACCCTGTGTTTTTTTTCTTGCCGGTGGTGAAGGCGGAGGAAGGGTGCGTGGAAATGTGCGGCCGGCTGGGGGTGGCGCTGACGGTGGTGCGGTCGATGGCGGATGCGTTCTATATAACGCAGATTGTGGTGAGGTTTAGGACGGCTTATGTGGCTCCGTCGACGTCCAAGATCTTTGGGAGAGGGGAGCTCGTGATAGATCCTTCTAAGATTGCTGCTAATTATCTCGTTTTCCACTTTTGGCTTGATTTTGCTGCTGCATTGCCTCTTCCTCAGGCATTCATATGGGTTGCAATCCCAAACATTAGGGGTTCAAACATGACCCCATGGAGTTACTTTCTTCGATTCTCCATCCTCTTCCAATACTTCTTGAGGCTCTATCTCATCTTTCCTCTATCTGATCAAATCATTAAGGCTACTGGAGTTCTCATGAAAACGGCATGGGCGGGAGCGGTTTATAACTTAATGCTCTTTATGCTAGCAAGTCATGTTTTGGGGTCGTGTTGGTACCTTTTATGCATAGGAAGACAAATGGATTGCTGGAAAAAGGTTTGCAGTTTGGGGCATTTGGATTGCCAATATGAGTTTTTTGATTGTAAAGCTGTGGGAAATCCAAGTAGAGCTGCTTGGTTTGAAGCAACCAATATCTCAAATCTGTGTCATCCAACTGCCACCACTTTCTTCCATTTTGGGATTTTTTCTGATTCCAATTTTGCTTCTACTTCTTCCACCTTCTTCAATAGGTACTTCTATTGTTTTTGGTGGGGCTTGAGGAATTTAAGCTCCTTGGGACAAAATTTGCTAACAAGTAGCAATGTGGGAGAAATCAAGTTCGCGATTGTGATTGCGATTGTGGGATTGGTGCTTTTCGCACTTCTGATTGGAAATATGCAAACTTATCTTCAATCGAGCACTTTGAGACTGGAAGAATGGAGAGTGAGGAGGACAGACACAGAGCAATGGATGCGCCATAGGCAACTTCCATATGAACTCAAACAAAGCGTTAGAAAATATGACCAATTTCGATGGATCGCAACTCATGGGGTTGATGAACAACACATTCTTAAAGGCCTTCCTATGGATCTTAGACGAGATATCAAACGTCATCTTTGCCTTCATCTCGTTCGTCAGGTGCCACTGTTGGACGAAATGGAGGAGAGAATGTTGGAGGCAATATGCGAAAGGTTAAGACCTTGTTTAAGCACATCCAACACTTTCCCAGTGAACGAGATGCTCTTCATAATCCGAGGCCATCTCGACTCCCACACCACTAACGGCGGCCGCACCGGCTTCTTCAACTCCCGCCGCCTCGGCCCCACTGACCCTCCACCCTCGCCCCGCCGCCGTCCTCCCCTCCTCCACCCGCACCGTCAAGGCCATCACCCAAGTCGAGGCCTTTGCTCTCATTGCCGACGACTTGAAGTTCGTCGCCGCCTTCACAGCAAGCAGCTCCGCTACACTTTCAGGTTCTACTCCCACCAGTGCCGGACTTGGGCCGCCTGGTTTACCTACAAGCGCCGGAAGGAACCCAACGAGACTGTTGTTGGCGGTGGCGGCGGCCATGGGTCCTTGTTGACAAAGCCCCTTGAACCTGACTTTTCTGTTGAAGACCACAGGTGA | 1854 | 48.54 | MESNSPRWRSMTVRFQDEERLKDGEAKRRKKEVVGESSSRVFSEDYDVVDRMVLDPRLPILNRWNRVFLVACLVSLFVDPVFFFLPVVKAEEGCVEMCGRLGVALTVVRSMADAFYITQIVVRFRTAYVAPSTSKIFGRGELVIDPSKIAANYLVFHFWLDFAAALPLPQAFIWVAIPNIRGSNMTPWSYFLRFSILFQYFLRLYLIFPLSDQIIKATGVLMKTAWAGAVYNLMLFMLASHVLGSCWYLLCIGRQMDCWKKVCSLGHLDCQYEFFDCKAVGNPSRAAWFEATNISNLCHPTATTFFHFGIFSDSNFASTSSTFFNRYFYCFWWGLRNLSSLGQNLLTSSNVGEIKFAIVIAIVGLVLFALLIGNMQTYLQSSTLRLEEWRVRRTDTEQWMRHRQLPYELKQSVRKYDQFRWIATHGVDEQHILKGLPMDLRRDIKRHLCLHLVRQVPLLDEMEERMLEAICERLRPCLSTSNTFPVNEMLFIIRGHLDSHTTNGGRTGFFNSRRLGPTDPPPSPRRRPPLLHPHRQGHHPSRGLCSHCRRLEVRRRLHSKQLRYTFRFYSHQCRTWAAWFTYKRRKEPNETVVGGGGGHGSLLTKPLEPDFSVEDHR | 617 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 66968446 | 66973151 | - | Tan0010328.1 | Tan03g1076 | 746580 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g1076 | 617 | Gene3D | - | 67 | 381 | - | - | |
Tan03g1076 | 617 | Gene3D | Jelly Rolls | 456 | 519 | IPR014710 | - | |
Tan03g1076 | 617 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 32 | 519 | - | - | |
Tan03g1076 | 617 | MobiDBLite | consensus disorder prediction | 528 | 543 | - | - | |
Tan03g1076 | 617 | MobiDBLite | consensus disorder prediction | 503 | 543 | - | - | |
Tan03g1076 | 617 | SUPERFAMILY | Voltage-gated potassium channels | 62 | 380 | - | - | |
Tan03g1076 | 617 | PRINTS | EAG/ELK/ERG potassium channel family signature | 371 | 380 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Tan03g1076 | 617 | PRINTS | EAG/ELK/ERG potassium channel family signature | 421 | 428 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Tan03g1076 | 617 | PRINTS | EAG/ELK/ERG potassium channel family signature | 120 | 129 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Tan03g1076 | 617 | PRINTS | EAG/ELK/ERG potassium channel family signature | 327 | 344 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Tan03g1076 | 617 | PRINTS | EAG/ELK/ERG potassium channel family signature | 353 | 364 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Tan03g1076 | 617 | PRINTS | EAG/ELK/ERG potassium channel family signature | 238 | 248 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Tan03g1076 | 617 | MobiDBLite | consensus disorder prediction | 591 | 617 | - | - | |
Tan03g1076 | 617 | Pfam | Ion transport protein | 66 | 384 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan03g1076 | 617 | SUPERFAMILY | cAMP-binding domain-like | 388 | 505 | IPR018490 | - | |
Tan03g1076 | 617 | Gene3D | Helix hairpin bin | 386 | 449 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g1076 | Tan-Chr3:66968446 | Tan09g1637 | Tan-Chr9:68010666 | 1.00E-145 | dispersed | |
Tan03g1076 | Tan-Chr3:66968446 | Tan05g0241 | Tan-Chr5:1824058 | 9.50E-192 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g1076 | K05391 | - | csv:101221856 | 777.704 |