Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan03g1138 | ATGTCTTCCACTCTCTGTTTTCCCTCTGTCACTTTCCCCTCTACTCTCCCCCTCCATAGAAGAATCCCTCTCAGGCGAAAAACCCCATTTCCATATCTCTCCATTAAATCCTCCATTGACGAAAGGGATCCCCCAACGCCCACGAAGCTCAACAATTCCATCAACACTTCAAAATCCGGTTCCTGGGTCAGCCCAGATTGGCTCACTTCTCTGACTCGCTACATTACCCTAGGCCAGGGCGACGACTCGGGCATTCCCATAGCCAGTGCGAAGCTCGATGACGTTTCTGATCTTCTCGGCGGTGCTCTTTTCCTTCCACTCTTCAAGTGGATGAATGACTATGGACCCATTTACAGGCTCGCCGCTGGTCCTAGGAATTTCGTTGTGGTTAGTGACCCCGCCATTGCTAAGCATGTTCTCAGGAATTATGGGACTTACGCTAAAGGGCTTGTTTCTGAGGTCTCCGAGTTCTTGTTCGGGTCGGGTTTTGCGATTGCAGAAGGCCCGCTTTGGACGGTTCGGCGTAGGGCTGTGGTTCCATCTCTTCACAAGAAGTACTTATCGGTTATTGTTGATCGAGTATTCTGTAAATGTGCCATGAGATTGGTGGAGAAGCTGCAAAAGGATGCATTAAATAACAATTCAGTTAACATGGAGGAAAAGTTTTCCCAACTAACTCTTGATGTCATTGGTCTATCTGTATTCAACTACAGTTTTGATTCTCTCTCTACTGACAGCCCTGTGATTGATGCAGTTTACACTGCTTTGAAAGAGGCAGAGGCTCGTTCTACTGATATCTTACCATATTGGAAGATTAAGGCTCTGTGTAAGATTATCCCAAGACAGATAAAAGCTGAAGAAGCAGTTACAGTGATCAGGAGAACTGTTGAAGAACTAATTGCTAAGTGCAAAGAAATTGTGGAAACTGAGGGTGAGCGTATTGATGAGGAGGAATATGTGAATGATGCTGATCCAAGCATCCTTCGTTTTCTGCTGGCCAGTAGACAAGAGGTCTCAAGTGTACAATTGCGAGACGATCTATTGTCAATGTTAGTCGCTGGACATGAAACTACCGGTTCTGTTCTGACTTGGACACTATATCTTTTAAGTAAGGATTCCTCATCATTGATCAAGGCACAAAATGAAGTTGATAGAGTCTTACAAGGAAGGCCTCCTTCCTATGAAGACACGAAGGAACTTAAATTTTTGACGCGTTGTATACTTGAGTCGATGCGCCTTTACCCACATCCACCTGTTTTGATAAGAAGAGCTCAAGTTGCTGACGTACTGCCTGGAAATTACAAGGTTAATGCTGGTCAAGATATCATGATTTCAGTATATAACATCCATCGCTCTTCCCAGGTTTGGGAACAAGCAGAAGAGTTTATACCAGAAAGATTTGACTTGGAAGGTCCTGTGCCTAATGAAAGCAATACAGATTTCAGATTTATTCCGTTCAGCGGAGGTCCCCGAAAGTGTGTAGGTGATCAATTTGCCCTGCTTGAAGCTATCGTTGCACTTGCCATATTTTTGCAGCATATGAACTTCGAGCTGGTTCCGGATCAGACCATTGGGATGACTACTGGAGCAACTATACATACAACAAATGGTTTGTACATGAAACTCAGCCAAAGGCAGCTGACCCCAGAATTAGCTTCTTCTGCTTCGTTAAGGTAA | 1677 | 44.6 | MSSTLCFPSVTFPSTLPLHRRIPLRRKTPFPYLSIKSSIDERDPPTPTKLNNSINTSKSGSWVSPDWLTSLTRYITLGQGDDSGIPIASAKLDDVSDLLGGALFLPLFKWMNDYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTYAKGLVSEVSEFLFGSGFAIAEGPLWTVRRRAVVPSLHKKYLSVIVDRVFCKCAMRLVEKLQKDALNNNSVNMEEKFSQLTLDVIGLSVFNYSFDSLSTDSPVIDAVYTALKEAEARSTDILPYWKIKALCKIIPRQIKAEEAVTVIRRTVEELIAKCKEIVETEGERIDEEEYVNDADPSILRFLLASRQEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDSSSLIKAQNEVDRVLQGRPPSYEDTKELKFLTRCILESMRLYPHPPVLIRRAQVADVLPGNYKVNAGQDIMISVYNIHRSSQVWEQAEEFIPERFDLEGPVPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFELVPDQTIGMTTGATIHTTNGLYMKLSQRQLTPELASSASLR | 558 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 67573529 | 67579596 | - | Tan0017253.1 | Tan03g1138 | 746642 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan03g1138 | 558 | Gene3D | Cytochrome P450 | 86 | 556 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1138 | 558 | PANTHER | CYTOCHROME P450 FAMILY 4 | 102 | 543 | IPR050196 | GO:0009507(PANTHER)|GO:0009974(PANTHER)|GO:0016117(PANTHER) | |
| Tan03g1138 | 558 | MobiDBLite | consensus disorder prediction | 36 | 58 | - | - | |
| Tan03g1138 | 558 | Pfam | Cytochrome P450 | 107 | 528 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1138 | 558 | CDD | CYP97 | 105 | 539 | - | - | |
| Tan03g1138 | 558 | SUPERFAMILY | Cytochrome P450 | 99 | 545 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1138 | 558 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 486 | 495 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan03g1138 | 558 | PRINTS | P450 superfamily signature | 353 | 370 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1138 | 558 | PRINTS | P450 superfamily signature | 405 | 416 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1138 | 558 | PRINTS | P450 superfamily signature | 484 | 493 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1138 | 558 | PRINTS | P450 superfamily signature | 493 | 504 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1138 | 558 | PRINTS | E-class P450 group I signature | 483 | 493 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1138 | 558 | PRINTS | E-class P450 group I signature | 111 | 130 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1138 | 558 | PRINTS | E-class P450 group I signature | 342 | 359 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1138 | 558 | PRINTS | E-class P450 group I signature | 445 | 469 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1138 | 558 | PRINTS | E-class P450 group I signature | 493 | 516 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1138 | 558 | PRINTS | E-class P450 group I signature | 362 | 388 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1138 | 558 | MobiDBLite | consensus disorder prediction | 44 | 58 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g1451 | Tan-Chr1:14615191 | Tan03g1138 | Tan-Chr3:67573529 | 4.40E-128 | dispersed | |
| Tan03g1138 | Tan-Chr3:67573529 | Tan04g1622 | Tan-Chr4:30359602 | 4.60E-36 | dispersed | |
| Tan03g1138 | Tan-Chr3:67573529 | Tan08g0209 | Tan-Chr8:1911372 | 1.10E-34 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan03g1138 | K09837 | - | csv:101204961 | 1020.38 |