Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1153 ATGAAATTGCCGATATTTGTAATTCCTCTGATCGCTGTTTCTTGTCTTCTTGCTGTTTTGGGTCCTCAATTCTCTTCGGACTGGACCAGTTTATTTGATAAATATGCTTCCATTTCGAGCTCTGTTTCTTCTTCAACCGAAACAGAGGATTTTCATTCTAATACCACGGCGGCGGCCGTGGATGATCAAACAGTGAAACAACAACAAAAACAAAAACGACCTCTGTTCGATGACTCTGTTTCAAATAACTCTGTTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTCCACCACCGCCACCGACCAACGAAATACAGAGTCTTCAACAACTCCCTAATACGATGACCGTCAACGAAAGTTTGGAAGAAACCGCCATTAATAAAGTGAGAAACGTTTCTTCCGAAGGTAATTATGAATCGGCGGTGAAAGCCAGAACACAGAGGGAATATACAAAACTGGAAAAAATCGAAGCAGGGCTTAGAAGAGCAAGAGCCGCCATTAAAGAAGCCAAGTTCCAAAACCAAACTCAAGATCCTGATTTTGTTCCCACTGGTCCAATGTATTGGAATGCCAAAGCATTTCACAGGAGCTACCAAGAAATGGAGAAGGAGCTGAAGATCTTCGTGTACGAAGAAGGAGAGCCTCCTCTGTTTCACAATGGCCCCTGCAAGAGCATTTACTCCACTGAAGGCAACTTCATCCACACCATCGAAATGGACTCCCGGTTTCGAACCAAGGATCCCGACAAGGCTCATGTCTTCTTCCTTCCTCTAAGCGTCGCCATGCTCGTTCAGTTCGTCTACATCCGCGACTCCCATGACTTCACTCCAATACGACACACCGTCGTTGATTATGTCAATGTCATTGGAACCAAATATCCATTCTGGAATCGCACCCTCGGTGCCGATCATTTCATGCTTTCCTGCCATGATTGGGGTCCAGAAGCATCAAAATCAGTTCCCCATTTGTACAAAAACTCCATTAGAGTACTCTGCAACGCCAACACTTCAGAAGGCTTCAACCCATCAAAGGACGTTTCCTTCCCAGAAATCAATCTCCAAACAGGTTTCCTGACCGGATTTCTGGGCGGCCCATCTCCGTCGCGCCGCCCAATTCTGGCCTTCTTCGCCGGCGGCCTTCACGGCCCAATAAGGCCCATTCTAATCCAACAATGGGAGAACAAAGACAACGACATTCAAGTCCATCAGTACCTCCCCAAAGGCGTCTCTTACATTGACATGATGAGGAAGAGCAAGTTCTGTCTCTGCCCCAGCGGCTACGAAGTCGCCAGCCCCCGAATTGTGGAGGCCATTTACACCGGCTGCGTCCCGGTCCTCATTTCCGACCACTACGTCCCGCCGTTCAGCGACGTTATCAACTGGAAATCTTTCTCGGTCGAGGTCTCGGTCGACGACATTCCCAATTTGAAGAAGATACTCACCGGGATATCGCCGCGCCAGTACCTGAGAATGTATAGGAGAGTGGTCAAGGTTAGGAGACACTTTGAAGTCAACTCTCCGCCGAAGAGATTTGATGTGTACCACATGATTCTTCATTCTGTATGGCTTAGAAGACTCAATCTTAGAGTGCGTGATCGTTAG 1614 47.09 MKLPIFVIPLIAVSCLLAVLGPQFSSDWTSLFDKYASISSSVSSSTETEDFHSNTTAAAVDDQTVKQQQKQKRPLFDDSVSNNSVFSSSSSSSSSSSSSSPPPPPTNEIQSLQQLPNTMTVNESLEETAINKVRNVSSEGNYESAVKARTQREYTKLEKIEAGLRRARAAIKEAKFQNQTQDPDFVPTGPMYWNAKAFHRSYQEMEKELKIFVYEEGEPPLFHNGPCKSIYSTEGNFIHTIEMDSRFRTKDPDKAHVFFLPLSVAMLVQFVYIRDSHDFTPIRHTVVDYVNVIGTKYPFWNRTLGADHFMLSCHDWGPEASKSVPHLYKNSIRVLCNANTSEGFNPSKDVSFPEINLQTGFLTGFLGGPSPSRRPILAFFAGGLHGPIRPILIQQWENKDNDIQVHQYLPKGVSYIDMMRKSKFCLCPSGYEVASPRIVEAIYTGCVPVLISDHYVPPFSDVINWKSFSVEVSVDDIPNLKKILTGISPRQYLRMYRRVVKVRRHFEVNSPPKRFDVYHMILHSVWLRRLNLRVRDR 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 67834283 67837726 + Tan0013538.1 Tan03g1153 746657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1153 537 MobiDBLite consensus disorder prediction 74 97 - -
Tan03g1153 537 MobiDBLite consensus disorder prediction 43 110 - -
Tan03g1153 537 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 224 484 - -
Tan03g1153 537 Coils Coil 157 177 - -
Tan03g1153 537 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Tan03g1153 537 MobiDBLite consensus disorder prediction 43 65 - -
Tan03g1153 537 Pfam Exostosin family 206 485 IPR040911 -
Tan03g1153 537 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 91 529 IPR004263 GO:0006486(InterPro)|GO:0016757(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2733 Tan-Chr2:95606393 Tan03g1153 Tan-Chr3:67834283 1.00E-129 dispersed
Tan03g1153 Tan-Chr3:67834283 Tan10g1859 Tan-Chr10:59038199 5.20E-154 dispersed
Tan03g1153 Tan-Chr3:67834283 Tan08g0285 Tan-Chr8:2600090 3.40E-121 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1153 - - - 0.0