Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1157 ATGGAGACTAAGAAGCAAGAGGAGGATCAGTCCGATAGCAGCGATTACACCTCGGAGGACGAAGGAACTGAGGATTACCGGCGAGGAGGCTACCACGCCGTTCGAATTGGCGATACTTTCAAGAATGGTAGATATGTGGTTCAGAGCAAGCTCGGTTGGGGCCATTTCTCCACCGTCTGGCTTGCCTGGGACATCCAATCCTCTCGGTATGTAGCTCTCAAAGTTCAGAAGAGTGCTCAGCACTACACTGAAGCAGCTATGGATGAGATTACCATCTTGAAACAGATTGCTGACGGAGACCCTGATGATAAAAAATGTGTGGTGAAGCTTTTGGATCATTTCAAGCATTCAGGACCTAATGGGCAGCATGTTTGTATGATTTTTGAGTATTTGGGGGATAATCTGTTGACACTAATTAAGTATACTGACTACCGCGGATTACCGATTCATATGGTTAAGGAGATATGTTTTCATATATTGGTTGGTTTGGATTACTTGCACAAACAGCTCTCTATTATACATACTGATTTGAAGCCTGAAAATATTTTGTTACTGTCAATGATTGACCCATCAAAGGATCCCAGAAAATCTGGCATCCCACTTATTCTTCCAACTAACAAGGACAAGGCTACATTGGAGTGTGGGATTTCCAAAGACATAAAATTATCAAATGGAGATTTTAGTAAACACCATAAGAGAAACATTCGACGTAAGGCAAAGCAAGCTGCTCTAGGGTGTGTGGAGAAGGAAATGACTGTGGAGGCTGAGGCTAATCCAGAGACATCTTATACCGTCGAATCGTCTCCTAATGCAAAGTTGAGCACAGGTGCTACTGAGGAAAAACAAACTAGTTCTTTCAATACAAATAGATCATCTGATGCTGATGGAGCAAAGGGCGGCAGGGAAGAAAATCAAGTTGCCAAGAAAGGAAGTCGATTGAGAAAGAAGATGTTATTGGCTTCGGTGGATCTGAATTGCAAGTTGGTTGACTTTGGAAATGCATGTTGGACATACAAACAGTTTACAAATGACATTCAGACTCGACAGTATAGGTGCCCAGAAGTTATCCTTGGATCAAAGTATTCTACATCAGCAGATCTTTGGTCCTTTGCATGTATTTGTTTTGAGCTTGCAACTGGTGATGTACTCTTTGACCCTCATAGTGGTGACAACTTTGACAGAGATGAGAATGTGTTAAGAGGGTTTGTTTCGAATCTTTGTCTAATTTTTTCTTGA 1236 41.91 METKKQEEDQSDSSDYTSEDEGTEDYRRGGYHAVRIGDTFKNGRYVVQSKLGWGHFSTVWLAWDIQSSRYVALKVQKSAQHYTEAAMDEITILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMIFEYLGDNLLTLIKYTDYRGLPIHMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGIPLILPTNKDKATLECGISKDIKLSNGDFSKHHKRNIRRKAKQAALGCVEKEMTVEAEANPETSYTVESSPNAKLSTGATEEKQTSSFNTNRSSDADGAKGGREENQVAKKGSRLRKKMLLASVDLNCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDENVLRGFVSNLCLIFS 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 67869151 67872446 - Tan0016445.2 Tan03g1157 746661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1157 411 Gene3D Phosphorylase Kinase; domain 1 31 130 - -
Tan03g1157 411 Pfam Protein kinase domain 319 391 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1157 411 Pfam Protein kinase domain 45 185 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1157 411 SMART serkin_6 45 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1157 411 MobiDBLite consensus disorder prediction 295 309 - -
Tan03g1157 411 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524(InterPro)
Tan03g1157 411 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 5 400 IPR051334 GO:0000245(PANTHER)|GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0050684(PANTHER)
Tan03g1157 411 ProSiteProfiles Protein kinase domain profile. 45 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1157 411 SUPERFAMILY Protein kinase-like (PK-like) 40 394 IPR011009 -
Tan03g1157 411 Gene3D Transferase(Phosphotransferase) domain 1 99 187 - -
Tan03g1157 411 MobiDBLite consensus disorder prediction 257 294 - -
Tan03g1157 411 MobiDBLite consensus disorder prediction 1 28 - -
Tan03g1157 411 MobiDBLite consensus disorder prediction 257 309 - -
Tan03g1157 411 FunFam Os03g0748400 protein 312 396 - -
Tan03g1157 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1157 411 FunFam CMGC/SRPK protein kinase 31 130 - -
Tan03g1157 411 Gene3D Transferase(Phosphotransferase) domain 1 321 401 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1157 Tan-Chr3:67869151 Tan05g0176 Tan-Chr5:1405893 1.10E-146 dispersed
Tan03g1156 Tan-Chr3:67869151 Tan03g1157 Tan-Chr3:67869151 9.10E-231 tandem
Tan03g1157 Tan-Chr3:67869151 Tan03g1158 Tan-Chr3:67869151 1.20E-230 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67309 PF00069 Pkinase 1.90E-20 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1157 K08832 - csv:101206384 760.37