Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1176 ATGGAAATGCCTGGAAGGAGGTCAGATTACACGCTTTTAAGTCAAATTCCGGACGAGGAGGTTGGAACGGGAGCTTCCACTTCGTTTTACGAGTCCTTCGCAGCTGACGGAAACATTATTAAGGGGAGAACCGATAGAGTTTTTGATTGGGATGGGAGTGGTGATCACAAGATGAACACGCAGGCGAATCGGATGGGGAACTTGTATTCATCGATTGGTTTGCAGAGGCATTCCAGTGGAAGTAGCTACGATGAAAGCTCTCTCTCCAGTGATTACTACGCACCTACGCTCTCAAACCCAGCAGTAAATGAGATCAATTTATTGGGATATTTCCACGACGATGAATTAAGAGTGAAAGCTGTGGGAAGTGGAGGTTCGTCGGGGAAGAGCTGGGCGCAGCAGACGGAAGAGAGTTATCAGTTGCAGCTGGCCTTGGCTCTCAGACTTTCTTCAGAGGCCACATGTGCCGATGATCCCAATTTTATGGATCCGATGCCAGACGAGAGAGCTTTAAGATCGTTGTCGAGTTCAGCTGAGGCCATATCGCATCGATTTTGGGTAAATGGATGCATGTCCTATTTTGAGAAAGTGCCTGATGGCTTTTATCTAATTCATGGGATGAACCCTTATGTATGGTCTTTATGCTCCAATCTGCAAGAGGATGGCCGCATTCCATCATTTGAATCTCTGAAGACAGTTGATTCCAGCGTTGGTTCATCGATCGAAGTAGTTTTGATAGATCAGCATAGTGATGCTAGTTTAAAGGAACTGAAAAACAGAGTGCATAATATATCTTCTAGCTGTATAACCACAAAAGAGGTTGCAGATCACTTAGCAAAGCTGGTGTGCAATCACATGGGGGGTTCAGTTTCTGAAGGAGAAGATGACTTGGTTTCCTCCTGGAGGGAATGCAGCGATGACGTAAAAGAATGTTTGGGATCTATTGTGATTCCGTTATGCAGCTTATCTGTTGGCCTTTGCAGACATCGTGCTCTTTTATTCAAAGTGCTAGCTGATTCAATTGGTTTGCCCTGTCGAATTGCCAAGGGCTGTAAATATTGCACTAGAGATGATGCTTCATCTTGCCTTGTTAGGTTCGGGCTTGATAGGGAATATCTCATTGATCTGATTGGCAAGCCAGGTTGCTTATGCGAACCTGATTCTTTGCTCAATGGTCCATCATCCATCTCAATTTCTTCACCATTGCGATTTCCAAGACTAAAACCTATTGAATCTACCATTGATTTCAGGTCACTGGCCAAACAGTATTTCTTGGATAGTCAATCACTTAATATTGTATTTGATGAAGCTTCTTCAGGGAATGTTGCATCTGGGCAGAAGGATGCCACATCCTCTGCCTATCAAAGAACATTCAATAGGAAGGATGTAGATGGTAAAAACATAGTACTTACTGGTGACAGGGATAGAAGTTTTCAGTTATTGAACCCGAAAGCTTCTCAACCAAGTGCTCAAGATGGAAAGGCTGAGCAATTTAGATCATGTGATACTTCTCAATATACTGTACAGTCTGCACCTTTTGTAGAACATGTAGTACCGTTAAACCAGATCTCACTGTTTGGTTCCAGAGATTCTGAGCCTCTCTTAGCATTGCCTCATCTAAGGATGGATCTTGCTAGCAATTTATCATTCCCTGAGGATAGTCAACCAGTTAAAAAACCAAATGAACTTTCCCTTGGCTTAGAGGATTTGGTTGTTCCTTGGAATGATCTTGTTTTGAGGGAGAAAATTGGCGCAGGTTCTTTTGGGACTGTATACCATGCTGATTGGCATGGATCTGATGTTGCGGTGAAGATTCTGATGGAACAAGACCTACATGCAGAACGTTTTGATGAATTTCTCAGAGAGGTTGCCATAATGAAATGTCTAAGACATCCGAACATTGTCCTCTTTATGGGCGCAGTCACTGAGCCTCCAAACTTGTCCATTGTCACGGAATACTTATCAAGAGGTAGCTTGCACAGGCTTTTGCATAGACCTGGAGCAAGAGAAGTCTTAGATGAGAGACGCCGGTTAAACATGGCATACGACGTTGCAAAGGGAATGAACTATCTTCACAAACGTAACCCTCCAATTGTTCATCGTGATTTGAAATCTCCAAATCTTTTGGTTGATAAGAAGTACACAGTAAAGGTTTGCGATTTTGGGCTTTCACGCTTAAAGGCACACACATTTCTTTCATCAAAATCAGCTGCTGGGACTCCTGAATGGATGGCACCAGAAGTTCTCCGTGATGAGCCATCAAATGAGAAATCTGATGTATATAGCTTTGGTGTGATACTGTGGGAGCTTGCTACATTGCAGCAGCCATGGGGCAACTTGAACCCAGCGCAGGTTGTGGCAGCTGTGGGCTTTAAAGGCAAAAGGCTTGAGATCCCACGCGATTTAAATCCTCAAGTTGCTACTATTATAGAGGCTTGCTTTGCCAGTGAGCCACGGAAACGTCCATCCTTCTATGAAGTAATGGAATCTTTGAAGCCATTGATCAAACCTTCTACGCCTCATCAAGTTCGCTCAAACACGTCATTAGTTACTCAATGA 2559 43.57 MEMPGRRSDYTLLSQIPDEEVGTGASTSFYESFAADGNIIKGRTDRVFDWDGSGDHKMNTQANRMGNLYSSIGLQRHSSGSSYDESSLSSDYYAPTLSNPAVNEINLLGYFHDDELRVKAVGSGGSSGKSWAQQTEESYQLQLALALRLSSEATCADDPNFMDPMPDERALRSLSSSAEAISHRFWVNGCMSYFEKVPDGFYLIHGMNPYVWSLCSNLQEDGRIPSFESLKTVDSSVGSSIEVVLIDQHSDASLKELKNRVHNISSSCITTKEVADHLAKLVCNHMGGSVSEGEDDLVSSWRECSDDVKECLGSIVIPLCSLSVGLCRHRALLFKVLADSIGLPCRIAKGCKYCTRDDASSCLVRFGLDREYLIDLIGKPGCLCEPDSLLNGPSSISISSPLRFPRLKPIESTIDFRSLAKQYFLDSQSLNIVFDEASSGNVASGQKDATSSAYQRTFNRKDVDGKNIVLTGDRDRSFQLLNPKASQPSAQDGKAEQFRSCDTSQYTVQSAPFVEHVVPLNQISLFGSRDSEPLLALPHLRMDLASNLSFPEDSQPVKKPNELSLGLEDLVVPWNDLVLREKIGAGSFGTVYHADWHGSDVAVKILMEQDLHAERFDEFLREVAIMKCLRHPNIVLFMGAVTEPPNLSIVTEYLSRGSLHRLLHRPGAREVLDERRRLNMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKAHTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKGKRLEIPRDLNPQVATIIEACFASEPRKRPSFYEVMESLKPLIKPSTPHQVRSNTSLVTQ 852
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 68064574 68073534 + Tan0001166.4 Tan03g1176 746680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1176 852 ProSiteProfiles Protein kinase domain profile. 577 835 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1176 852 Pfam Ethylene-responsive protein kinase Le-CTR1 178 384 - -
Tan03g1176 852 SUPERFAMILY Protein kinase-like (PK-like) 558 831 IPR011009 -
Tan03g1176 852 CDD STKc_MAP3K-like 583 831 - -
Tan03g1176 852 Gene3D Transferase(Phosphotransferase) domain 1 656 845 - -
Tan03g1176 852 SMART serkin_6 577 835 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1176 852 Gene3D Phosphorylase Kinase; domain 1 570 655 - -
Tan03g1176 852 FunFam Serine/threonine-protein kinase CTR1 656 841 - -
Tan03g1176 852 FunFam Serine/threonine-protein kinase isoform 1 568 655 - -
Tan03g1176 852 ProSitePatterns Protein kinases ATP-binding region signature. 583 604 IPR017441 GO:0005524(InterPro)
Tan03g1176 852 PANTHER SERINE-THREONINE PROTEIN KINASE 174 833 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan03g1176 852 Pfam Protein tyrosine and serine/threonine kinase 578 831 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1176 852 PRINTS Tyrosine kinase catalytic domain signature 739 749 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1176 852 PRINTS Tyrosine kinase catalytic domain signature 758 780 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1176 852 PRINTS Tyrosine kinase catalytic domain signature 802 824 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1176 852 PRINTS Tyrosine kinase catalytic domain signature 692 710 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1176 852 PRINTS Tyrosine kinase catalytic domain signature 651 664 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1176 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1174 Tan-Chr3:68064574 Tan03g1176 Tan-Chr3:68064574 0.00E+00 dispersed
Tan03g1176 Tan-Chr3:68064574 Tan08g1774 Tan-Chr8:69733366 0.00E+00 dispersed
Tan03g1175 Tan-Chr3:68064574 Tan03g1176 Tan-Chr3:68064574 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67314 PF07714 PK_Tyr_Ser-Thr 2.60E-69 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1176 K14510 - csv:101208800 1483.77