Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g1176 | ATGGAAATGCCTGGAAGGAGGTCAGATTACACGCTTTTAAGTCAAATTCCGGACGAGGAGGTTGGAACGGGAGCTTCCACTTCGTTTTACGAGTCCTTCGCAGCTGACGGAAACATTATTAAGGGGAGAACCGATAGAGTTTTTGATTGGGATGGGAGTGGTGATCACAAGATGAACACGCAGGCGAATCGGATGGGGAACTTGTATTCATCGATTGGTTTGCAGAGGCATTCCAGTGGAAGTAGCTACGATGAAAGCTCTCTCTCCAGTGATTACTACGCACCTACGCTCTCAAACCCAGCAGTAAATGAGATCAATTTATTGGGATATTTCCACGACGATGAATTAAGAGTGAAAGCTGTGGGAAGTGGAGGTTCGTCGGGGAAGAGCTGGGCGCAGCAGACGGAAGAGAGTTATCAGTTGCAGCTGGCCTTGGCTCTCAGACTTTCTTCAGAGGCCACATGTGCCGATGATCCCAATTTTATGGATCCGATGCCAGACGAGAGAGCTTTAAGATCGTTGTCGAGTTCAGCTGAGGCCATATCGCATCGATTTTGGGTAAATGGATGCATGTCCTATTTTGAGAAAGTGCCTGATGGCTTTTATCTAATTCATGGGATGAACCCTTATGTATGGTCTTTATGCTCCAATCTGCAAGAGGATGGCCGCATTCCATCATTTGAATCTCTGAAGACAGTTGATTCCAGCGTTGGTTCATCGATCGAAGTAGTTTTGATAGATCAGCATAGTGATGCTAGTTTAAAGGAACTGAAAAACAGAGTGCATAATATATCTTCTAGCTGTATAACCACAAAAGAGGTTGCAGATCACTTAGCAAAGCTGGTGTGCAATCACATGGGGGGTTCAGTTTCTGAAGGAGAAGATGACTTGGTTTCCTCCTGGAGGGAATGCAGCGATGACGTAAAAGAATGTTTGGGATCTATTGTGATTCCGTTATGCAGCTTATCTGTTGGCCTTTGCAGACATCGTGCTCTTTTATTCAAAGTGCTAGCTGATTCAATTGGTTTGCCCTGTCGAATTGCCAAGGGCTGTAAATATTGCACTAGAGATGATGCTTCATCTTGCCTTGTTAGGTTCGGGCTTGATAGGGAATATCTCATTGATCTGATTGGCAAGCCAGGTTGCTTATGCGAACCTGATTCTTTGCTCAATGGTCCATCATCCATCTCAATTTCTTCACCATTGCGATTTCCAAGACTAAAACCTATTGAATCTACCATTGATTTCAGGTCACTGGCCAAACAGTATTTCTTGGATAGTCAATCACTTAATATTGTATTTGATGAAGCTTCTTCAGGGAATGTTGCATCTGGGCAGAAGGATGCCACATCCTCTGCCTATCAAAGAACATTCAATAGGAAGGATGTAGATGGTAAAAACATAGTACTTACTGGTGACAGGGATAGAAGTTTTCAGTTATTGAACCCGAAAGCTTCTCAACCAAGTGCTCAAGATGGAAAGGCTGAGCAATTTAGATCATGTGATACTTCTCAATATACTGTACAGTCTGCACCTTTTGTAGAACATGTAGTACCGTTAAACCAGATCTCACTGTTTGGTTCCAGAGATTCTGAGCCTCTCTTAGCATTGCCTCATCTAAGGATGGATCTTGCTAGCAATTTATCATTCCCTGAGGATAGTCAACCAGTTAAAAAACCAAATGAACTTTCCCTTGGCTTAGAGGATTTGGTTGTTCCTTGGAATGATCTTGTTTTGAGGGAGAAAATTGGCGCAGGTTCTTTTGGGACTGTATACCATGCTGATTGGCATGGATCTGATGTTGCGGTGAAGATTCTGATGGAACAAGACCTACATGCAGAACGTTTTGATGAATTTCTCAGAGAGGTTGCCATAATGAAATGTCTAAGACATCCGAACATTGTCCTCTTTATGGGCGCAGTCACTGAGCCTCCAAACTTGTCCATTGTCACGGAATACTTATCAAGAGGTAGCTTGCACAGGCTTTTGCATAGACCTGGAGCAAGAGAAGTCTTAGATGAGAGACGCCGGTTAAACATGGCATACGACGTTGCAAAGGGAATGAACTATCTTCACAAACGTAACCCTCCAATTGTTCATCGTGATTTGAAATCTCCAAATCTTTTGGTTGATAAGAAGTACACAGTAAAGGTTTGCGATTTTGGGCTTTCACGCTTAAAGGCACACACATTTCTTTCATCAAAATCAGCTGCTGGGACTCCTGAATGGATGGCACCAGAAGTTCTCCGTGATGAGCCATCAAATGAGAAATCTGATGTATATAGCTTTGGTGTGATACTGTGGGAGCTTGCTACATTGCAGCAGCCATGGGGCAACTTGAACCCAGCGCAGGTTGTGGCAGCTGTGGGCTTTAAAGGCAAAAGGCTTGAGATCCCACGCGATTTAAATCCTCAAGTTGCTACTATTATAGAGGCTTGCTTTGCCAGTGAGCCACGGAAACGTCCATCCTTCTATGAAGTAATGGAATCTTTGAAGCCATTGATCAAACCTTCTACGCCTCATCAAGTTCGCTCAAACACGTCATTAGTTACTCAATGA | 2559 | 43.57 | MEMPGRRSDYTLLSQIPDEEVGTGASTSFYESFAADGNIIKGRTDRVFDWDGSGDHKMNTQANRMGNLYSSIGLQRHSSGSSYDESSLSSDYYAPTLSNPAVNEINLLGYFHDDELRVKAVGSGGSSGKSWAQQTEESYQLQLALALRLSSEATCADDPNFMDPMPDERALRSLSSSAEAISHRFWVNGCMSYFEKVPDGFYLIHGMNPYVWSLCSNLQEDGRIPSFESLKTVDSSVGSSIEVVLIDQHSDASLKELKNRVHNISSSCITTKEVADHLAKLVCNHMGGSVSEGEDDLVSSWRECSDDVKECLGSIVIPLCSLSVGLCRHRALLFKVLADSIGLPCRIAKGCKYCTRDDASSCLVRFGLDREYLIDLIGKPGCLCEPDSLLNGPSSISISSPLRFPRLKPIESTIDFRSLAKQYFLDSQSLNIVFDEASSGNVASGQKDATSSAYQRTFNRKDVDGKNIVLTGDRDRSFQLLNPKASQPSAQDGKAEQFRSCDTSQYTVQSAPFVEHVVPLNQISLFGSRDSEPLLALPHLRMDLASNLSFPEDSQPVKKPNELSLGLEDLVVPWNDLVLREKIGAGSFGTVYHADWHGSDVAVKILMEQDLHAERFDEFLREVAIMKCLRHPNIVLFMGAVTEPPNLSIVTEYLSRGSLHRLLHRPGAREVLDERRRLNMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKAHTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKGKRLEIPRDLNPQVATIIEACFASEPRKRPSFYEVMESLKPLIKPSTPHQVRSNTSLVTQ | 852 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 68064574 | 68073534 | + | Tan0001166.4 | Tan03g1176 | 746680 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g1176 | 852 | ProSiteProfiles | Protein kinase domain profile. | 577 | 835 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan03g1176 | 852 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 178 | 384 | - | - | |
Tan03g1176 | 852 | SUPERFAMILY | Protein kinase-like (PK-like) | 558 | 831 | IPR011009 | - | |
Tan03g1176 | 852 | CDD | STKc_MAP3K-like | 583 | 831 | - | - | |
Tan03g1176 | 852 | Gene3D | Transferase(Phosphotransferase) domain 1 | 656 | 845 | - | - | |
Tan03g1176 | 852 | SMART | serkin_6 | 577 | 835 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan03g1176 | 852 | Gene3D | Phosphorylase Kinase; domain 1 | 570 | 655 | - | - | |
Tan03g1176 | 852 | FunFam | Serine/threonine-protein kinase CTR1 | 656 | 841 | - | - | |
Tan03g1176 | 852 | FunFam | Serine/threonine-protein kinase isoform 1 | 568 | 655 | - | - | |
Tan03g1176 | 852 | ProSitePatterns | Protein kinases ATP-binding region signature. | 583 | 604 | IPR017441 | GO:0005524(InterPro) | |
Tan03g1176 | 852 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 174 | 833 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Tan03g1176 | 852 | Pfam | Protein tyrosine and serine/threonine kinase | 578 | 831 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan03g1176 | 852 | PRINTS | Tyrosine kinase catalytic domain signature | 739 | 749 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan03g1176 | 852 | PRINTS | Tyrosine kinase catalytic domain signature | 758 | 780 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan03g1176 | 852 | PRINTS | Tyrosine kinase catalytic domain signature | 802 | 824 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan03g1176 | 852 | PRINTS | Tyrosine kinase catalytic domain signature | 692 | 710 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan03g1176 | 852 | PRINTS | Tyrosine kinase catalytic domain signature | 651 | 664 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan03g1176 | 852 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 698 | 710 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g1174 | Tan-Chr3:68064574 | Tan03g1176 | Tan-Chr3:68064574 | 0.00E+00 | dispersed | |
Tan03g1176 | Tan-Chr3:68064574 | Tan08g1774 | Tan-Chr8:69733366 | 0.00E+00 | dispersed | |
Tan03g1175 | Tan-Chr3:68064574 | Tan03g1176 | Tan-Chr3:68064574 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67314 | PF07714 | PK_Tyr_Ser-Thr | 2.60E-69 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g1176 | K14510 | - | csv:101208800 | 1483.77 |