Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1186 ATGGGATCTGGTACTTGTGAAATTGTTGAAGCAAGGGAAGAAATCAAACCTGTTCAAAGTAAGGTAGGATCTCGTCATTCAGATTTTGTATCAGATAAAGATCGAAAACTTTCTGCATTGAAAATTGGATTTAAGGGATCTCTAGAGGATGATATCAATCAGCTTTTTGAGTCAATTAGTATTAAAAATGCATCGAAGAGCTTAGGTCATTCACAAGTAGAGGTAAATGCACTGAGAAAAAGTACACTAAAGAAGCCAATAACTGTTGGCATACCCCGCTCTCCAGGAATTGGTAGTTCTGATTCTGGTAGTCTGAAGCAAGCACTCAGGGAACTATGCCTTTCAAAGGCGTCTGAAATGGCTGCTATGAAAAGATCATCAAAATCAGCTAGCTCTTCAAGACTCTCGGAAGCTGGGCGGATCAAGACATTGTACAACTCAGTTATGGTTGAAGCCACTGAGTCAGGCTCTTCTTCAGATAATGGTAAGGGGGGGCGCGTGGTTGAAATATCCCTGGTACCAGAGGAAAAAAGATTGAACTTTGAGAAGAGACCTGAGCATGCCCAGGCATTTTCCGTTAAATCACCGGCTGAAAGTGCTCTTTCTTCTCCTCAGTTACCAGTTGCGAAAACAAAAAATTCTATTGAGATTGTTACTGTGAAACAAAACGTCAATACCACTTTGTCAAGGAAAGTTGGATCTCAAACATTAAAGGCAGAGCTGGAGAAGGAAGAGGAGTCCATTACTCCACCGTCTATATCTTCTTGCACTATTGGCAAGGTTTTAGAGAAGGAGAAGAAAATTCTTGCCTCAAGCAGGGTAGCAAATAAAGTGTCATCATCTAAGGCAGGACGAAAAGGTAGGTTGCAAACTGCATCTTCATCTAAGTTGGGTAGTGGCAATAAGGTAAGCAAGTTATCTAGAAGTACCTCCCATTCCGTCAAACCAGTTATTAGGAACAAGGGGCTGGCTAAGAAGAAAGTCAAACAGGATCTGAGTTCTCCAACATGTAGTTCAAGCACATATAATGCAGTCAATGGCGATATCAATATGGATCCTAGTAAAAAGAAGTTGATATGTGAGAGGTGCCACTGTGCATTGAATAGTGCAGCTAAAGACTCAAAGAAGGGCTCTGCATCCCAGTTTAGTGGTCTTGGTACTGATGTAAACATGGGTAGTTCAAAATCTGGTGTTAACAAATCAGGCATCAATGCAGATGGCAAGGCTTCTGATGTTAGAGTAAAAAGAAATACAAGGGTACGAGATAAGGGTGAATTTTCTCAAAGCTCAAAAAGTAGTCAAGGTGAGTACAGTAGCAGTACGACCAGTATTATAAGTGATGACAGCAATGGGCATGGATCCAGTAATGGTAACAGACCTCATATGTCAAAAGATGTTAGGTGGGAAGCCATACGCCATGCACAATTGCAGCATGGGGTCCTCAGCTTGCGCCATTTCAATCTTTTAAAGAAGCTTGGCTGTGGGGATATTGGAACCGTGTATCTCGCTGAGCTAACTGGCACTAATTGCCTATTTGCCATTAAGGTCATGGACAACGAGTTTCTAGCAAGACGGAAGAAAATGCCTAGAGCGCAAACTGAGAGAGAAATACTAAGAATGCTAGATCATCCATTCCTCCCCACACTTTATGTTCAATTTACTTCAGATAATCTATCATGTCTTGTCATGGAGTATTGTCCTGGAGGAGATCTTCATGTCCTGCGGCAGAAGCAGCTAGGCAGAGTTTTTCCTGAACCCGCAGCAAGATTTTATGTTGCTGAGGTCCTCCTTGCTTTGGAGTACTTGCACATGCTAGGAGTTATTTATCGAGATTTAAAACCTGAGAACATTCTTGTTAGGGAAGATGGTCACATAATGCTTACCGACTTTGACCTGTCGCTTCGGTGCACGGTCAGTCCAACACTCCTGAAGTCATCGTCCTTCAATGCAGACTTGGTGAAAACATCAGGTCCGTGTACAGATTCTAGTTGTGCTGAGCCATTTTGCATTGAACCATCATGTCAAGTCCCATGCTTCAGCCCAAGGTTTTTACCTGCTGCTTCCAAAACAAGGAGGTCAAAACCTGACCTGCCAACACAGTTAAGGTCATTGCCCCAGCTCGTCGCTGAACCCACTGATGCACGATCCAATTCCTTCGTTGGGACTCATGAATATTTGGCTCCCGAGATCATTAAAGGAGAGGGTCATGGAGCTGCAGTTGATTGGTGGACGTTTGGTGTTTTTCTCTATGAACTTCTGTACGGTAGAACCCCTTTCAAGGGTTCCAATAATGAAGAAACATTAGCCAATGTAGTATTGCAGGGCCTCAGTTTTCCAGACAGTCCAATCGTTAGTTTCCAAGCAAGGGATCTTATCCGAGGGCTGTTGGTAAAAGAACCTGAAAATCGATTCGGGACAGAGAAAGGGGCTGCCGAGATAAAACAGCACCCGTTCTTCGAGGGGCTAAACTGGGCATTGATCCGTTGTGCAATTCCTCCAGAACTTCCGGACTTATGTGATATGGACATTCCAAGCATGATTTCTCAACAAAACAAGTTCAGGTATTTGGAAAGCAAGTCCACTGGAGAGCACTTGGAGTTCGAATTGTTTTAG 2613 43.17 MGSGTCEIVEAREEIKPVQSKVGSRHSDFVSDKDRKLSALKIGFKGSLEDDINQLFESISIKNASKSLGHSQVEVNALRKSTLKKPITVGIPRSPGIGSSDSGSLKQALRELCLSKASEMAAMKRSSKSASSSRLSEAGRIKTLYNSVMVEATESGSSSDNGKGGRVVEISLVPEEKRLNFEKRPEHAQAFSVKSPAESALSSPQLPVAKTKNSIEIVTVKQNVNTTLSRKVGSQTLKAELEKEEESITPPSISSCTIGKVLEKEKKILASSRVANKVSSSKAGRKGRLQTASSSKLGSGNKVSKLSRSTSHSVKPVIRNKGLAKKKVKQDLSSPTCSSSTYNAVNGDINMDPSKKKLICERCHCALNSAAKDSKKGSASQFSGLGTDVNMGSSKSGVNKSGINADGKASDVRVKRNTRVRDKGEFSQSSKSSQGEYSSSTTSIISDDSNGHGSSNGNRPHMSKDVRWEAIRHAQLQHGVLSLRHFNLLKKLGCGDIGTVYLAELTGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRVFPEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCTVSPTLLKSSSFNADLVKTSGPCTDSSCAEPFCIEPSCQVPCFSPRFLPAASKTRRSKPDLPTQLRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQGLSFPDSPIVSFQARDLIRGLLVKEPENRFGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCDMDIPSMISQQNKFRYLESKSTGEHLEFELF 870
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 68168131 68173185 - Tan0016014.1 Tan03g1186 746690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1186 870 SUPERFAMILY Protein kinase-like (PK-like) 461 837 IPR011009 -
Tan03g1186 870 SMART serkin_6 486 819 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1186 870 MobiDBLite consensus disorder prediction 409 426 - -
Tan03g1186 870 ProSiteProfiles Protein kinase domain profile. 486 819 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1186 870 Gene3D Transferase(Phosphotransferase) domain 1 566 635 - -
Tan03g1186 870 FunFam serine/threonine-protein kinase D6PK-like 714 837 - -
Tan03g1186 870 Gene3D Transferase(Phosphotransferase) domain 1 712 837 - -
Tan03g1186 870 MobiDBLite consensus disorder prediction 375 462 - -
Tan03g1186 870 FunFam serine/threonine-protein kinase D6PK-like 570 637 - -
Tan03g1186 870 MobiDBLite consensus disorder prediction 427 461 - -
Tan03g1186 870 Pfam Protein kinase domain 716 819 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1186 870 Pfam Protein kinase domain 487 638 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1186 870 Gene3D Phosphorylase Kinase; domain 1 484 565 - -
Tan03g1186 870 CDD STKc_phototropin_like 484 840 - -
Tan03g1186 870 MobiDBLite consensus disorder prediction 273 343 - -
Tan03g1186 870 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1186 870 MobiDBLite consensus disorder prediction 375 403 - -
Tan03g1186 870 FunFam Serine/threonine-protein kinase D6PK-like 484 569 - -
Tan03g1186 870 PANTHER FLIPPASE KINASE 1-RELATED 313 844 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan03g1186 870 MobiDBLite consensus disorder prediction 273 316 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1186 Tan-Chr3:68168131 Tan05g0143 Tan-Chr5:1135434 8.90E-196 dispersed
Tan01g0953 Tan-Chr1:9231667 Tan03g1186 Tan-Chr3:68168131 1.70E-87 transposed
Tan06g1215 Tan-Chr6:12967454 Tan03g1186 Tan-Chr3:68168131 2.50E-58 transposed
Tan03g1186 Tan-Chr3:68168131 Tan05g0142 Tan-Chr5:1118756 6.60E-106 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67315 PF00069 Pkinase 5.20E-36 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1186 - - - 0.0