Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g1186 | ATGGGATCTGGTACTTGTGAAATTGTTGAAGCAAGGGAAGAAATCAAACCTGTTCAAAGTAAGGTAGGATCTCGTCATTCAGATTTTGTATCAGATAAAGATCGAAAACTTTCTGCATTGAAAATTGGATTTAAGGGATCTCTAGAGGATGATATCAATCAGCTTTTTGAGTCAATTAGTATTAAAAATGCATCGAAGAGCTTAGGTCATTCACAAGTAGAGGTAAATGCACTGAGAAAAAGTACACTAAAGAAGCCAATAACTGTTGGCATACCCCGCTCTCCAGGAATTGGTAGTTCTGATTCTGGTAGTCTGAAGCAAGCACTCAGGGAACTATGCCTTTCAAAGGCGTCTGAAATGGCTGCTATGAAAAGATCATCAAAATCAGCTAGCTCTTCAAGACTCTCGGAAGCTGGGCGGATCAAGACATTGTACAACTCAGTTATGGTTGAAGCCACTGAGTCAGGCTCTTCTTCAGATAATGGTAAGGGGGGGCGCGTGGTTGAAATATCCCTGGTACCAGAGGAAAAAAGATTGAACTTTGAGAAGAGACCTGAGCATGCCCAGGCATTTTCCGTTAAATCACCGGCTGAAAGTGCTCTTTCTTCTCCTCAGTTACCAGTTGCGAAAACAAAAAATTCTATTGAGATTGTTACTGTGAAACAAAACGTCAATACCACTTTGTCAAGGAAAGTTGGATCTCAAACATTAAAGGCAGAGCTGGAGAAGGAAGAGGAGTCCATTACTCCACCGTCTATATCTTCTTGCACTATTGGCAAGGTTTTAGAGAAGGAGAAGAAAATTCTTGCCTCAAGCAGGGTAGCAAATAAAGTGTCATCATCTAAGGCAGGACGAAAAGGTAGGTTGCAAACTGCATCTTCATCTAAGTTGGGTAGTGGCAATAAGGTAAGCAAGTTATCTAGAAGTACCTCCCATTCCGTCAAACCAGTTATTAGGAACAAGGGGCTGGCTAAGAAGAAAGTCAAACAGGATCTGAGTTCTCCAACATGTAGTTCAAGCACATATAATGCAGTCAATGGCGATATCAATATGGATCCTAGTAAAAAGAAGTTGATATGTGAGAGGTGCCACTGTGCATTGAATAGTGCAGCTAAAGACTCAAAGAAGGGCTCTGCATCCCAGTTTAGTGGTCTTGGTACTGATGTAAACATGGGTAGTTCAAAATCTGGTGTTAACAAATCAGGCATCAATGCAGATGGCAAGGCTTCTGATGTTAGAGTAAAAAGAAATACAAGGGTACGAGATAAGGGTGAATTTTCTCAAAGCTCAAAAAGTAGTCAAGGTGAGTACAGTAGCAGTACGACCAGTATTATAAGTGATGACAGCAATGGGCATGGATCCAGTAATGGTAACAGACCTCATATGTCAAAAGATGTTAGGTGGGAAGCCATACGCCATGCACAATTGCAGCATGGGGTCCTCAGCTTGCGCCATTTCAATCTTTTAAAGAAGCTTGGCTGTGGGGATATTGGAACCGTGTATCTCGCTGAGCTAACTGGCACTAATTGCCTATTTGCCATTAAGGTCATGGACAACGAGTTTCTAGCAAGACGGAAGAAAATGCCTAGAGCGCAAACTGAGAGAGAAATACTAAGAATGCTAGATCATCCATTCCTCCCCACACTTTATGTTCAATTTACTTCAGATAATCTATCATGTCTTGTCATGGAGTATTGTCCTGGAGGAGATCTTCATGTCCTGCGGCAGAAGCAGCTAGGCAGAGTTTTTCCTGAACCCGCAGCAAGATTTTATGTTGCTGAGGTCCTCCTTGCTTTGGAGTACTTGCACATGCTAGGAGTTATTTATCGAGATTTAAAACCTGAGAACATTCTTGTTAGGGAAGATGGTCACATAATGCTTACCGACTTTGACCTGTCGCTTCGGTGCACGGTCAGTCCAACACTCCTGAAGTCATCGTCCTTCAATGCAGACTTGGTGAAAACATCAGGTCCGTGTACAGATTCTAGTTGTGCTGAGCCATTTTGCATTGAACCATCATGTCAAGTCCCATGCTTCAGCCCAAGGTTTTTACCTGCTGCTTCCAAAACAAGGAGGTCAAAACCTGACCTGCCAACACAGTTAAGGTCATTGCCCCAGCTCGTCGCTGAACCCACTGATGCACGATCCAATTCCTTCGTTGGGACTCATGAATATTTGGCTCCCGAGATCATTAAAGGAGAGGGTCATGGAGCTGCAGTTGATTGGTGGACGTTTGGTGTTTTTCTCTATGAACTTCTGTACGGTAGAACCCCTTTCAAGGGTTCCAATAATGAAGAAACATTAGCCAATGTAGTATTGCAGGGCCTCAGTTTTCCAGACAGTCCAATCGTTAGTTTCCAAGCAAGGGATCTTATCCGAGGGCTGTTGGTAAAAGAACCTGAAAATCGATTCGGGACAGAGAAAGGGGCTGCCGAGATAAAACAGCACCCGTTCTTCGAGGGGCTAAACTGGGCATTGATCCGTTGTGCAATTCCTCCAGAACTTCCGGACTTATGTGATATGGACATTCCAAGCATGATTTCTCAACAAAACAAGTTCAGGTATTTGGAAAGCAAGTCCACTGGAGAGCACTTGGAGTTCGAATTGTTTTAG | 2613 | 43.17 | MGSGTCEIVEAREEIKPVQSKVGSRHSDFVSDKDRKLSALKIGFKGSLEDDINQLFESISIKNASKSLGHSQVEVNALRKSTLKKPITVGIPRSPGIGSSDSGSLKQALRELCLSKASEMAAMKRSSKSASSSRLSEAGRIKTLYNSVMVEATESGSSSDNGKGGRVVEISLVPEEKRLNFEKRPEHAQAFSVKSPAESALSSPQLPVAKTKNSIEIVTVKQNVNTTLSRKVGSQTLKAELEKEEESITPPSISSCTIGKVLEKEKKILASSRVANKVSSSKAGRKGRLQTASSSKLGSGNKVSKLSRSTSHSVKPVIRNKGLAKKKVKQDLSSPTCSSSTYNAVNGDINMDPSKKKLICERCHCALNSAAKDSKKGSASQFSGLGTDVNMGSSKSGVNKSGINADGKASDVRVKRNTRVRDKGEFSQSSKSSQGEYSSSTTSIISDDSNGHGSSNGNRPHMSKDVRWEAIRHAQLQHGVLSLRHFNLLKKLGCGDIGTVYLAELTGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRVFPEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCTVSPTLLKSSSFNADLVKTSGPCTDSSCAEPFCIEPSCQVPCFSPRFLPAASKTRRSKPDLPTQLRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQGLSFPDSPIVSFQARDLIRGLLVKEPENRFGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCDMDIPSMISQQNKFRYLESKSTGEHLEFELF | 870 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 68168131 | 68173185 | - | Tan0016014.1 | Tan03g1186 | 746690 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g1186 | 870 | SUPERFAMILY | Protein kinase-like (PK-like) | 461 | 837 | IPR011009 | - | |
Tan03g1186 | 870 | SMART | serkin_6 | 486 | 819 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan03g1186 | 870 | MobiDBLite | consensus disorder prediction | 409 | 426 | - | - | |
Tan03g1186 | 870 | ProSiteProfiles | Protein kinase domain profile. | 486 | 819 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan03g1186 | 870 | Gene3D | Transferase(Phosphotransferase) domain 1 | 566 | 635 | - | - | |
Tan03g1186 | 870 | FunFam | serine/threonine-protein kinase D6PK-like | 714 | 837 | - | - | |
Tan03g1186 | 870 | Gene3D | Transferase(Phosphotransferase) domain 1 | 712 | 837 | - | - | |
Tan03g1186 | 870 | MobiDBLite | consensus disorder prediction | 375 | 462 | - | - | |
Tan03g1186 | 870 | FunFam | serine/threonine-protein kinase D6PK-like | 570 | 637 | - | - | |
Tan03g1186 | 870 | MobiDBLite | consensus disorder prediction | 427 | 461 | - | - | |
Tan03g1186 | 870 | Pfam | Protein kinase domain | 716 | 819 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan03g1186 | 870 | Pfam | Protein kinase domain | 487 | 638 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan03g1186 | 870 | Gene3D | Phosphorylase Kinase; domain 1 | 484 | 565 | - | - | |
Tan03g1186 | 870 | CDD | STKc_phototropin_like | 484 | 840 | - | - | |
Tan03g1186 | 870 | MobiDBLite | consensus disorder prediction | 273 | 343 | - | - | |
Tan03g1186 | 870 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 607 | 619 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan03g1186 | 870 | MobiDBLite | consensus disorder prediction | 375 | 403 | - | - | |
Tan03g1186 | 870 | FunFam | Serine/threonine-protein kinase D6PK-like | 484 | 569 | - | - | |
Tan03g1186 | 870 | PANTHER | FLIPPASE KINASE 1-RELATED | 313 | 844 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Tan03g1186 | 870 | MobiDBLite | consensus disorder prediction | 273 | 316 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g1186 | Tan-Chr3:68168131 | Tan05g0143 | Tan-Chr5:1135434 | 8.90E-196 | dispersed | |
Tan01g0953 | Tan-Chr1:9231667 | Tan03g1186 | Tan-Chr3:68168131 | 1.70E-87 | transposed | |
Tan06g1215 | Tan-Chr6:12967454 | Tan03g1186 | Tan-Chr3:68168131 | 2.50E-58 | transposed | |
Tan03g1186 | Tan-Chr3:68168131 | Tan05g0142 | Tan-Chr5:1118756 | 6.60E-106 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67315 | PF00069 | Pkinase | 5.20E-36 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g1186 | - | - | - | 0.0 |