Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1260 ATGGGGGTTCCACAGGCGATGGAAATTCTGAGCAAGAGAGCCGCACTTGTCAGAGAATCGCTGCAGAAGAGCCAGAATGTTACCGAGAACATGGTCTCCATTCTTGGCTCCTTCGACTACCGTCTCTCCGCCCTCGAAACCGCAATGCGCCCTACTCAGATAAGAACTCATTCAATTCGGAGGGCGCATGAGAATATTGACAAGACATTGAAGGCTGCGGAAAGTATACTAGCTCAGTTTGATCTTACACGCAAGGCTGAGGCTAAAATACTCAGAGGGCCACACGAGGACTTAGAAATGTACTTGGAAGCAATTGATCAACTACGAAGCACAAATCGCTACTTTACTGGGAACAAAAATTTCAAAAGTAACGATGCTATTCTTACCCATACAAGCAACTTGCTTGTTAAAGCCATTTCAAAGCTGGAAGATGAGTTCAGACAGCTTTTAACAAATTACAGTAAGCCAGTGGAACCTGATCGTCTTTTTGATTGCCTTCCCAACTCTTTGCGTCCATCATCAGCATCTGCGCACCATGGTGATAGTGGTAGCAAAAATAATTCTGACCATCACAACAAAAGCTTAGAAGCTGCCATCTTCATTCCCCCAACTCTTATTCCTCCCAGGGTTCTTCCATTGTTGCATGATTTGGCCCAACAAATGATTCTGGCTGGCCATCAACAACAACTATTTAGAATATACAGGGATACTCGTGCTTCAGTTTTAGAACAAAGTCTTAGGAAATTAGGTGTTGAGAGGCTTAGCAAGGACGATGTCCAGAAAATGCAGTGGGAGGCTCTTGAAGCTAAGATTGGGAACTGGATACATTACATGCGCATCGCTGTCAAACTGCTGTTTGCTGGGGAAAAGAAAATCTGTGATCAAATATTTGATGGTGCAGACTCTCTCCAGGATCAATGCTTTGCAGATGTGACTGCAAACAGTGTGTCAATGCTACTAAGTTTTGGAGAGGCAATTGCCAGAAGCAAGAGATCTCCAGAAAAATTGTTTGTTCTTTTAGACATGTTTGAAATAATGCGAGAACTGCAATCTGAGGTTGAAACACTTTTTGGAACTAAAGCATGCATTGAAATGCGGGATTCTGCATTGAGCTTAACACAACGCCTTGCTGAGACAGCTCAAGAGACCTTTGTTGATTTTGAAGAAGCCGTAGAAAAAGATGCCACAAAAACTGCTGTTCTTGATGGGACTGTTCATCCCTTGACTAGTTATGTGATAAACTATGTCAAGTTCTTATTTGACTACCAATCTACTTTGAAGCAACTATTCCAAGACTTTGACGCTAGTGATCCAGATGCTCAATTAGCAGTGGTAACTACAAGAATTACGCAGGCCCTTCAGACTAATCTTGATGGAAAATCTAAGCAATATAGGGATCCTGCATTAACTCAATTATTTCTGATGAACAATATTCACTATATAGTGAGATCTGTCCGAAGATCGGAGGCAAAGGATTTGTTGGGTGATGACTGGGTGCAGATACATCGAAGGATTGTGCAGCAGCATGCAAATCAATACAAGCGGATTTCTTGGGCAAAGATTCTGCAGTGCCTCACTGTTCAAGCCTCAGGTAGTGGTGGTGCTTCGGGAGATGCTAGCAGTGGACTTTCAAGAGCTATGGTGAAAGATAGGTTTAAGACTTTCAACATCCAATTTGAAGAGCTTCATCAACGGCAATCTCAATGGACAGTTCCTGACAGTGAGTTGCGGGAGTCATTGAGGTTGGCTGTTGCTGAAGTTTTATTGCCGGCCTACCGATCCTTTATCAAGCGTTTCGGGCCTATGATTGAGAATGGGAAAAATCCTCAAAAATACATCAGATATTCACCTGAGGATCTTGAGCGCATGCTAAATGAATTTTTTGAGGGCAAGACATTCAGTGAACAAAAGCGCTAG 1917 42.88 MGVPQAMEILSKRAALVRESLQKSQNVTENMVSILGSFDYRLSALETAMRPTQIRTHSIRRAHENIDKTLKAAESILAQFDLTRKAEAKILRGPHEDLEMYLEAIDQLRSTNRYFTGNKNFKSNDAILTHTSNLLVKAISKLEDEFRQLLTNYSKPVEPDRLFDCLPNSLRPSSASAHHGDSGSKNNSDHHNKSLEAAIFIPPTLIPPRVLPLLHDLAQQMILAGHQQQLFRIYRDTRASVLEQSLRKLGVERLSKDDVQKMQWEALEAKIGNWIHYMRIAVKLLFAGEKKICDQIFDGADSLQDQCFADVTANSVSMLLSFGEAIARSKRSPEKLFVLLDMFEIMRELQSEVETLFGTKACIEMRDSALSLTQRLAETAQETFVDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQSTLKQLFQDFDASDPDAQLAVVTTRITQALQTNLDGKSKQYRDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQASGSGGASGDASSGLSRAMVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRFGPMIENGKNPQKYIRYSPEDLERMLNEFFEGKTFSEQKR 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 68895106 68908809 - Tan0016758.1 Tan03g1260 746764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1260 638 PANTHER EXOCYST COMPLEX PROTEIN EXO70 13 631 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Tan03g1260 638 SUPERFAMILY Cullin repeat-like 75 629 IPR016159 -
Tan03g1260 638 Pfam Exo70 exocyst complex subunit C-terminal 273 626 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Tan03g1260 638 Pfam Exocyst complex component Exo70 N-terminal 69 151 - -
Tan03g1260 638 Gene3D Exocyst complex component Exo70 74 638 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0677 Tan-Chr3:62297719 Tan03g1260 Tan-Chr3:68895106 1.10E-52 dispersed
Tan03g1260 Tan-Chr3:68895106 Tan04g0719 Tan-Chr4:6197485 4.90E-276 dispersed
Tan03g1260 Tan-Chr3:68895106 Tan09g2370 Tan-Chr9:73415933 5.70E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1260 K07195 - csv:105436019 1195.65