Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan03g1301 | ATGTCGACCATGAATTCCAGTGTTCTGGCCTGCAACTACGCCATTTCAGGCGCTGGATCCGCCGAACTTAACTCGAAACTCAGCGCTGTGCCTTCTGTGGCATCGCCTGGGGTTTCTGGTTACAAGTTGCCTGTGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCTAAGAATGAAGGTAGGAGAACTGCGCTTCTTTTCCTTGGAGCTTCCCTCTTTGCTGCGGCTGCGGCTTCCTCCAACTCTTCTGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAATTGAATGACAAGAAAAGATTGGCAACAAGTGGAGCAAACTTTGCAAGGGCATACACTGTTGAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAACAAAAGAAAGTTCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGGAAGGATAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA | 516 | 46.9 | MSTMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPVIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW | 171 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 69482662 | 69484893 | + | Tan0005417.1 | Tan03g1301 | 746805 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan03g1301 | 171 | FunFam | Photosystem I reaction center subunit N | 87 | 171 | - | - | |
| Tan03g1301 | 171 | Gene3D | - | 87 | 171 | IPR044907 | - | |
| Tan03g1301 | 171 | PANTHER | PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC | 1 | 171 | IPR008796 | GO:0009522(InterPro)|GO:0015979(InterPro)|GO:0030093(PANTHER) | |
| Tan03g1301 | 171 | Pfam | Photosystem I reaction centre subunit N (PSAN or PSI-N) | 44 | 171 | IPR008796 | GO:0009522(InterPro)|GO:0015979(InterPro) |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan03g1301 | K02701 | - | csv:101204396 | 291.582 |