Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1303 ATGCCTGCTTGGTGGGTAAGAAAATTCAGTAAAAACAAGGAGCATCACAATCACCCCACTACTTTTCTCAACTTCTCCAAGTCTCCTTCCCCCAAAAGTGAGCCTAAGAAGGGGGCAGATAAGCCCAGGAGCTTCGATGACGCCTCTGCTGTGATTTTCTCTCGCAATTCCCCGAGGTCTAGCAGGGATCTGGCCTCTTCTGGGGGTGTTGATGGTGGCGGCTCTTCTGGGTCCGATAGTGGGGATAAGAGTCATCCTCTTCCTCGACCTGCTACTTCCGGCCTTGGGATTGATCATGGAGTCGGGATTGGATCTGGGTCGGTTTCGGTTTCCAGTGTTAGCTCTTCTGGGTCATCGGATGATCATCCATCTGCTCAAGAACAGCTTCAGTTTGGAGGTTACAGAGGATTTGGTGATACCAGAATAGAGACAAGGCAAAGTTCAGGTCCAGGATCAAGAGGACCCACCAGTCCTACATCGCCTCTCAACCCACGGTTCTGTGGCATGAGTCTGGAGTCTCCTACAGGCAAGCTAGATGACGGGAAGAATCGATGTCATAAACTGCCACTTCCTCCAAGCTCTCCCACCAGTCCTTCTTCCTTGACCAGCACGAAAGCTATCAATATCGGTGATAACAATGCGACTACACAATCGAAGTGGAAGAAAGGAAGGCTTCTAGGAAGGGGAACATTTGGGCATGTTTACCTTGGATTTAACAGTGTAAGTGGCCAAATGTGTGCAATTAAGGAGGTCAAGGTTATAAGTGATGACTCGACATCAAAGGAATGTCTCAAGCAATTGAATCAGGAGATAACCGTGCTTAGTCAGCTGTCGCATCCGAACATTGTCCGGTACTATGGTAGTGAAATGGGTGACGAATCGCTCTCAGTCTATTTAGAATATGTCTCCGGTGGTTCAATACACAAATTACTTCAGGAATATGGCGCCTTCAAAGAACCTGTTATAAGAAATTATACCCGAAAGATTCTTTCTGGGCTTGCTTATCTGCATGGGAGAAATACAGTGCATAGGGATATAAAAGGAGCAAATATCTTGGTGGATCCAAATGGCGAGGTCAAGTTGGTCGACTTCGGCATGGCGAAGCATATAACGAATTGTACTTCGATGCTTTCTTTCAAAGGCAGTCCTTATTGGATGGCCCCTGAGGTTGTGATGAATACAAATGGCTACAGTCTTGCTGTAGATATTTGGAGTCTAGGGTGTACGGTTCTAGAAATGGCAACATCTAAACCACCTTGGAGCAAATACGAAGGGGTGGCTGCCATATTCAAAATTGGAAATAGCAAAGACATTCCTGAAATTCCAGACCATCTCTCCTATGATGCTAAAAATTTTGTGCAATTATGCTTACAACGGGATCCATCTGCACGTCCTTCTGCTGCAGAACTACTGGATCACCCTTTTGTTCAAGATGCAGTAACTCCAAGGGCATCTGATTTCAACTTTTCCATTGATGTTTTTCCCTTTAGCTTCGATGGAAGCCAGACTCCGCCATTGTTAGATCGGCATCCAAACAGAAAGAGTATAAGCATATGTGATGGAGATTACGTGACAAACCCAACAATCTCTTCCAGAGCTCCAAGGAGTCCTAGAGGAAATGCAAGATTGATCACATCCTTGCCCGTCTCTCCATGTTCGAGTCCATTACGGTCGTATGGTCCCGCACACCAGAGCTGTTATCTTTCACCACCCCACAAGTACATGGGGTTGGGTCAAAGCGGTTACAATTTGAATGAATATGCATATAACACGAGACCAAACACATTGTTCACCCTTGACCCTTCACGAGATTCTTCGATATTGAAAGTGCAGACTCCTGGTGGATCACCAAGAAGACCACTTTGA 1866 46.03 MPAWWVRKFSKNKEHHNHPTTFLNFSKSPSPKSEPKKGADKPRSFDDASAVIFSRNSPRSSRDLASSGGVDGGGSSGSDSGDKSHPLPRPATSGLGIDHGVGIGSGSVSVSSVSSSGSSDDHPSAQEQLQFGGYRGFGDTRIETRQSSGPGSRGPTSPTSPLNPRFCGMSLESPTGKLDDGKNRCHKLPLPPSSPTSPSSLTSTKAINIGDNNATTQSKWKKGRLLGRGTFGHVYLGFNSVSGQMCAIKEVKVISDDSTSKECLKQLNQEITVLSQLSHPNIVRYYGSEMGDESLSVYLEYVSGGSIHKLLQEYGAFKEPVIRNYTRKILSGLAYLHGRNTVHRDIKGANILVDPNGEVKLVDFGMAKHITNCTSMLSFKGSPYWMAPEVVMNTNGYSLAVDIWSLGCTVLEMATSKPPWSKYEGVAAIFKIGNSKDIPEIPDHLSYDAKNFVQLCLQRDPSARPSAAELLDHPFVQDAVTPRASDFNFSIDVFPFSFDGSQTPPLLDRHPNRKSISICDGDYVTNPTISSRAPRSPRGNARLITSLPVSPCSSPLRSYGPAHQSCYLSPPHKYMGLGQSGYNLNEYAYNTRPNTLFTLDPSRDSSILKVQTPGGSPRRPL 621
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 69495962 69500158 - Tan0018745.1 Tan03g1303 746807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1303 621 SUPERFAMILY Protein kinase-like (PK-like) 218 565 IPR011009 -
Tan03g1303 621 MobiDBLite consensus disorder prediction 601 621 - -
Tan03g1303 621 CDD STKc_MEKK1_plant 219 476 - -
Tan03g1303 621 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 42 483 IPR050538 -
Tan03g1303 621 MobiDBLite consensus disorder prediction 50 64 - -
Tan03g1303 621 MobiDBLite consensus disorder prediction 141 166 - -
Tan03g1303 621 FunFam Mitogen-activated protein kinase kinase kinase 218 499 - -
Tan03g1303 621 ProSitePatterns Protein kinases ATP-binding region signature. 226 249 IPR017441 GO:0005524(InterPro)
Tan03g1303 621 MobiDBLite consensus disorder prediction 1 206 - -
Tan03g1303 621 MobiDBLite consensus disorder prediction 105 126 - -
Tan03g1303 621 SMART serkin_6 220 476 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1303 621 Gene3D Transferase(Phosphotransferase) domain 1 216 491 - -
Tan03g1303 621 ProSiteProfiles Protein kinase domain profile. 220 476 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1303 621 Pfam Protein kinase domain 221 476 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0227 Tan-Chr1:2023667 Tan03g1303 Tan-Chr3:69495962 2.00E-118 dispersed
Tan03g1303 Tan-Chr3:69495962 Tan03g1510 Tan-Chr3:71414674 1.50E-91 dispersed
Tan03g1303 Tan-Chr3:69495962 Tan07g0368 Tan-Chr7:7326783 5.50E-123 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67316 PF00069 Pkinase 4.90E-73 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1303 K04421 - csv:101203907 990.719