Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1361 ATGGACACCGCTGGTAGACTCATTGCTGGGTCTCACAATAGAAACGAGTTTGTTCTGATCAATGCAGATGAAACTGCTCGGATCAAGGCTGTGAGGGAATTAAGTGGGCAAACATGTCAGATTTGTGGAGATGAGGTAGAGTTAACGGCTGAAGGAGAGCTCTTTGTTGCCTGTAATGAATGTGCTTTCCCAGTCTGTAGACCTTGCTATGAGTATGAGCGAAGAGAGGGAAATCAAGCTTGTCCACAGTGTAAAACCAGATACAAGCGCCTGAAAGGTAGTCCTAGGGTTGAAGGTGATGAGGATGAAGATGATATTGATGATTTGGATAATGAGTTTGACTATGGAAACCTCGATGCTTTTGGGCCTCATGCTGCAGAGGCATCATTTGCTTCACACCTTAACACTGGCCGTGGTTCCCACCCTAATGCATCTCACATCTCTGGACAGTCGGAGCATGAACCTTCTCCCCTTGGTTCTGAAATTCCTCTCCTGACATATGGCGAGGAGGATTATGAGATTTCTTCTGATCAACATGCTCTTGTACCCCATTTTACGGGTCATGGAAGCAGAGTCCACCCAATGCCTTACCCTGATCCTTCAATACCTTCTCAACCTAGACCAATGGTTCCCCAAAAAGATATTGCGGTGTATGGTTATGGGAGTGTGGCATGGAAGGACAGAATGGAGGATTGGAAGAAGAAGCAAAATGATAAACTTCAAGTGGTGAAGCACCAAGGGGTTGACGATGGTGGAAATGATATTGACGATCCTGACTTGCCCATGATGGATGAAGCGAGGCAACCGCTATCAAGGAAATTGCCCATCTCTTCAAGCAGGATAAATCCATACAGATTAATCATCTTGCTTCGTCTTGTTATTCTCGGCCTGTTTTTCCATTACAGAATTCTTCATCCAGTTAAAGATGCATATGGCCTGTGGTTGACTTCAGTAATATGTGAAATATGGTTTGCGGCATCGTGGATTCTGGATCAGTTCCCAAAATGGTATCCAATTGAAAGGGAAACTTATCTTGATAGGCTTTCACTGAGGTATGAAAAAGAAGGGAAACCTTCTGAATTAGCTAGTGTGGACGTATTTGTCAGTACTGTTGATCCAATGAAAGAACCTCCACTAATCACGGCCAACACAGTACTTTCCATCCTTGCAGTCGATTATCCAGTTGATAAAGTTGCATGCTATGTCTCAGATGATGGTGCAGCCATGTTAACTTTTGAAGCTCTCTCTGAGACATCTGAATTTGCTAGGAAATGGGTTCCTTTTTGTAAGAAATTCAATATTGAACCCCGTGCCCCAGAATTTTACTTCTCTCAGAAGATTGATTATTTGAAGAACAAGGTCCATCCGGCATTTGTCAGGGAAAGGCGAGCAATGAAGAGAGAATATGAAGAATTTAAGGTTAGGGTAAATGCTTTGGTCTCCATGGCTCAAAAGGTCCCTGAGGATGGCTGGACAATGCAAGATGGTACTCCATGGCCTGGGAACAATGTTCGAGACCACCCTGGCATGATTCAGGTCTTCCTTGGCCAGAGTGGAGTTTGTGATGTTGAAGGAAATGAGCTACCACGTCTAGTTTATGTCTCTCGTGAAAAGCGGCCAGGGTTCGAACACCACAAGAAGGCTGGGGCCATGAATGCACTGGTTCGAGTCTCAGCGGTTCTGTCAAATGCTCCTTATCTTCTTAATGTCGACTGTGATCACTACATTAACAATAGCAAGGCACTTAGAGAAGCTATGTGTTTCATGATGGATCCTACATCAGGGAAGAAAGTTTGTTATGTGCAGTTTCCTCAAAGATTTGATGGAATTGATCGACATGATCGATATTCGAACCGGAATGTTGTATTCTTTGATATTAACATGAAAGGATTGGATGGACTACAAGGACCGATATATGTTGGTACGGGATGTGTTTTCCGGAGGGTTGCCCTCTATGGATATGATGCTCCTGCCAAGAAGAAACCCCCAAGCAAAACATGCAACTGCTTGCCAAAATGGTGCTGTCTGTGTTGTGGGTCTAGAAGGAACAAGAAGGGAAAGGCCAAGAATGAGAAAAAGAAGAAGACAAAGCACAGAGAAGCATCAAAGCAGATCCATGCACTTGAGAATATCGAGGAGGGAATCGAAGAGCTAAGCATAGAGAAATTGAATGTGTCTCAAATAAAATTGGCGAAAAAATTCGGGCAATCTCCAGTGTTTGTCGCCTCGACCCTACTGGAAAATGGAGGAGTTCCTCATGATGTGAGTGCTGCATCACTCCTAAGAGAAGCCATCCAAGTCATTAGTTGTGGTTATGAAGATAAAACAGAATGGGGGAAAGAGGTTGGATGGATTTATGGTTCTGTGACTGAAGATATCTTGACTGGATTTAAAATGCATTGTCACGGTTGGCGGTCTGTTTACTGTATTCCCAAGCGGCCTGCTTTTAAAGGGTCAGCTCCTATCAACCTCTCCGATCGTCTACACCAAGTTTTGCGATGGGCTCTTGGATCGGTTGAGATATTCTTGAGCAGACACTGTCCTATCTGGTATGGCTATGGTGGCGGGTTGAAATGGTTGGAACGTTTTTCGTACATAAACTCAGTGGTCTATCCGTGGACCTCGATTCCATTGCTTGTTTACTGTAGTCTGCCAGCTATTTGTCTTCTCACTGGAAAATTTATTGTCCCTGAGGTAATCTCTTTCTCCTTTAGTTACTTTTGGTTTGCTTGA 2733 43.94 MDTAGRLIAGSHNRNEFVLINADETARIKAVRELSGQTCQICGDEVELTAEGELFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRLKGSPRVEGDEDEDDIDDLDNEFDYGNLDAFGPHAAEASFASHLNTGRGSHPNASHISGQSEHEPSPLGSEIPLLTYGEEDYEISSDQHALVPHFTGHGSRVHPMPYPDPSIPSQPRPMVPQKDIAVYGYGSVAWKDRMEDWKKKQNDKLQVVKHQGVDDGGNDIDDPDLPMMDEARQPLSRKLPISSSRINPYRLIILLRLVILGLFFHYRILHPVKDAYGLWLTSVICEIWFAASWILDQFPKWYPIERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFNIEPRAPEFYFSQKIDYLKNKVHPAFVRERRAMKREYEEFKVRVNALVSMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQSGVCDVEGNELPRLVYVSREKRPGFEHHKKAGAMNALVRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKVCYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRVALYGYDAPAKKKPPSKTCNCLPKWCCLCCGSRRNKKGKAKNEKKKKTKHREASKQIHALENIEEGIEELSIEKLNVSQIKLAKKFGQSPVFVASTLLENGGVPHDVSAASLLREAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLLVYCSLPAICLLTGKFIVPEVISFSFSYFWFA 910
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 70069167 70076478 + Tan0014114.1 Tan03g1361 746865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1361 910 MobiDBLite consensus disorder prediction 133 155 - -
Tan03g1361 910 SUPERFAMILY Nucleotide-diphospho-sugar transferases 377 890 IPR029044 -
Tan03g1361 910 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 273 906 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER)
Tan03g1361 910 Pfam Zinc-binding RING-finger 29 105 IPR027934 -
Tan03g1361 910 MobiDBLite consensus disorder prediction 133 162 - -
Tan03g1361 910 FunFam Cellulose synthase 481 655 - -
Tan03g1361 910 Pfam Cellulose synthase 364 907 IPR005150 GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro)
Tan03g1361 910 SUPERFAMILY RING/U-box 26 111 - -
Tan03g1361 910 FunFam Cellulose synthase 21 112 - -
Tan03g1361 910 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 520 656 IPR029044 -
Tan03g1361 910 CDD mRING-HC-C4C4_CesA 37 87 - -
Tan03g1361 910 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Tan03g1361 910 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Tan03g1361 910 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1361 Tan-Chr3:70069167 Tan10g1797 Tan-Chr10:55052167 0.00E+00 dispersed
Tan03g1361 Tan-Chr3:70069167 Tan05g0894 Tan-Chr5:7188981 1.30E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1361 K10999 - csv:101211094 1736.85