Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1376 ATGATACCCTTTTTCCCATCTTCTTCAAAATCCCTTCTGAGCTTCTTTTTGTTCCTTATCTCTTTCACTCTTCTCTCCCTCTCTGTTTTCTCTGTGACTCCTTCTTCTTCCCACAGAGACGCCCAGCAACTGATTTCCTTGAAATCTTCACTTCCCAATCCAAGCCTCCTTCAGAACTGGCTTTCCAATGGCGACCCATGTTCGTTCTCCGGCATTACTTGCAAGGAAACCAGAGTTTCCGCCATAGACTTGAGCTTCGTGTCTTTGAGCTCTAATTTTACCCATGTGTTCCCTTTGCTTGCGGGTCTCGACCATTTGGAATCGCTTTCTCTGAAATCCACCAACCTCACTGGCTCCATTTCTCTGCCCGCTGGATTCAAGTGTAGCCCTCTGCTTTCTTCTCTAGATCTGTCCCTCAATGGCTTGTTTGGTTCTGTTTCTGATGTCTCTAACTTGGGGTTTTGCTCCAATGTCAAGTCGCTCAATCTGTCCTTTAATTCATTTGATTTTCCCCCAAAAGACTCCGCCCCCGGATTGAAGCTCGATTTGCAGGTTCTCGATCTTTCTTCCAACCGGATTGTTGGGTCGAAATTAGTTCCGTGGATTTTCTCTGCTGGGTGTGGTAATTTGCAGTACTTGGCATTGAAGGGCAACAAAATCAGCGGGGAGATTAATCTCTCGTCCTGTAATAAACTCGAGCATTTGGATATTTCTGGCAATAATTTCTCTGTGGGTATTCCTTCGTTTGGCGATTGCTCTGTTTTGGAGCATCTTGATATCTCCGGCAATAAGTTCACCGGCGACGTCGGACATGCTCTATCGTCTTGTCTGCAACTCAGCTTTCTGAATCTCTCGAGCAACCAGTTTCAAGGTCCAGTCCCTTCATTTCCGTCGTCGAATTTGTGGTTTCTTTCGCTTGCTAACAACGATTTTCAAGGGGAGATTCCTGTAAGTATTGCAGATTTGTGTTCTAATTTGGTTAAGCTGGATCTTTCTTCTAATAGTTTGATTGGGGCCGTGCCTTCTGCGTTGGGGTCTTGTTCTTTGTTGGAAGTTTTGGACATTTCGAAAAATAACCTCTCTGGTGAGCTCCCCATTGCTGTTTTTGCCAAAATGAGTAGTCTCAAGAGACTCTCTGTCTCGGATAACAAGTTTTTTGGGGTTTTGTCGGATTCTTTGTCTCAACTCACCACTTTGAACTCTTTGGATCTGAGTTCTAATAACTTTTCTGGGTCGATTCCGGCGGGGCTCTGTAAAGACCCTAATAACAGCTTGAAAGAACTGTTTCTTCAGAACAATTGGCTGACCGGTCGAATCCCTGCAACTATTAGTAATTGTTCTCAGCTGGTTTCTCTTGATTTGAGCTTCAACTTTCTGAGTGGGACGATCCCTTCCAGTTTGGGATCGCTTTCTAAGCTTAAGAACTTGATTATGTGGTTGAATCAGCTCGAGGGGGAGATTCCATCGGATTTTAAGAACTTTCAAGGGCTTGAGAATCTGATCCTGGATTTCAATGAGCTCACCGGAATGATTCCTTCTGGTTTAAGCAATTGCACCAACTTGAACTGGATTTCTTTGTCGAACAACCGGTTGAGCGGAGAGATTCCTGTCTGGATTGGGCGCCTGCCGAGCCTTGCCATCCTTAAGCTCAGCAACAACTCGTTCTATGGTAGGATTCCTCCGGAGCTGGGCGATTGTCGGAGCTTGATCTGGCTTGACCTCAATACCAATCTCTTGAATGGAACCATCCCTCCGGAGCTGTTTCGTCAATCCGGTAACATTGCTGTTAACTTTATCACTGGGAAGTCGTATGCTTACATTAAGAATGATGGTAGCAAGCAGTGCCATGGAGCTGGAAATTTGCTCGAGTTTGCTGGGATAAGGCAAGAACAAGTGAACAGGATTTCAAGTAAGAGTCCCTGCAATTTCACCAGGGTTTATAAAGGAATGACTCAGCCGACGTTTAACCATAACGGGTCGATGATCTTTCTCGATCTTTCGCATAATATGTTGTCTGGTAGTATTCCCAAGGAGATTGGTTCTACAAATTATCTCTACATATTGGATTTGGGCCATAACAGGCTCTCGGGAGCCATTCCGCAGGAGGTTGGCGACTTGACGAAACTCAACATTCTTGATCTCTCAAGCAATGAGCTTGAAGGATCAATTCCATTGTCCTTGACTGGGCTTTCCTCCCTCATGGAGATTGATCTGTCAAACAATCATCTCAATGGTTCAATACCCGAATCAGCTCAGTTCGAAACGTTCCCGGCATCTGGTTTTGCAAATAATTCTGGGCTCTGTGGGTACCCTCTCCCTCAATGTGGTGGTGATTCAGCAGCAAATGCAAATGCTCAGCATCAAAGATCTCATAGAAAACAGGCATCGCTAGCAGGAAGCGTCGCCATGGGGCTACTCTTCTCCCTCTTCTGTATATTTGGTCTGATTATAGTCGTTATTGAGATGAGGAAGAGAAGGAAAAAGAAGGATTCTACTCTTGACTCTTATATTGAGAGTCATTCTCAATCAGGCACGACGACCACTGTTAACTGGAAGAACACCTGTGTCCGTGAAGCATTGAGCATCAATCTTGCAACATTCGAGAAGCCACTTCGGAAGCTTACATTTGCAGATCTTCTCGACGCGACAAATGGCTTCCACAACGATAGCCTGATTGGTTCGGGGGGGTTCGGCGACGTATATAAGGCTCAACTGAAGGATGGAAGCATTGTAGCGATCAAGAAGCTGATTCATGTCAGTGGACAGGGGGATAGGGAGTTCACTGCAGAAATGGAAACCATTGGCAAAATCAAACACCGAAACCTGGTACCTCTTCTTGGCTACTGCAAAGTCGGAGAAGAACGGCTTCTCGTGTACGAGTACATGAAATTCGGAAGCTTGGAAGACGTTTTGCACGATCAGAAGAAGGGCGGGATCAAACTGAATTGGGCTGCAAGAAGGAAGATTGCCATTGGAGCTGCAAGGGGACTGGCTTTCCTGCACCACAATTGCATCCCTCACATCATTCACAGGGACATGAAATCAAGCAATGTGTTATTGGATGAGAACTTGGAAGCCAGAGTCTCAGATTTTGGAATGGCAAGACTGATGAGTGCCATGGACACCCATTTGAGTGTCAGCACATTAGCCGGAACGCCCGGCTATGTCCCTCCCGAATATTACCAGAGCTTCCGATGTTCAACAAAAGGCGACGTTTACAGTTACGGTGTTGTTATGCTCGAGCTCTTAACAGGAAAGCGACCCACAGATTCTGCTGATTTTGGGGATAACAATCTCGTCGGATGGGTTAAACAACACGCCAAGTTGGACCTAACCGACGTCTTCGATCCAGAGCTCTTGAAGGAGGATCCAAGCCTCAAGATAGAGCTTTTAGAACACTTGAAGGTAGCTGTTGCTTGCTTAGATGATAGGTCATGGCGGCGTCCAACAATGATCCAAGTGATGACGATGTTCAAGGAAATCCAAGCTGGGTCAGGGATGGATTCACAATCTACGATCGGAACCGACAACGGAGGATTCAGCGTCGACATGGTAGACATGAGCTTAAAGGAAGTACCAGAAGGCAAGTAA 3591 45.89 MIPFFPSSSKSLLSFFLFLISFTLLSLSVFSVTPSSSHRDAQQLISLKSSLPNPSLLQNWLSNGDPCSFSGITCKETRVSAIDLSFVSLSSNFTHVFPLLAGLDHLESLSLKSTNLTGSISLPAGFKCSPLLSSLDLSLNGLFGSVSDVSNLGFCSNVKSLNLSFNSFDFPPKDSAPGLKLDLQVLDLSSNRIVGSKLVPWIFSAGCGNLQYLALKGNKISGEINLSSCNKLEHLDISGNNFSVGIPSFGDCSVLEHLDISGNKFTGDVGHALSSCLQLSFLNLSSNQFQGPVPSFPSSNLWFLSLANNDFQGEIPVSIADLCSNLVKLDLSSNSLIGAVPSALGSCSLLEVLDISKNNLSGELPIAVFAKMSSLKRLSVSDNKFFGVLSDSLSQLTTLNSLDLSSNNFSGSIPAGLCKDPNNSLKELFLQNNWLTGRIPATISNCSQLVSLDLSFNFLSGTIPSSLGSLSKLKNLIMWLNQLEGEIPSDFKNFQGLENLILDFNELTGMIPSGLSNCTNLNWISLSNNRLSGEIPVWIGRLPSLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLLNGTIPPELFRQSGNIAVNFITGKSYAYIKNDGSKQCHGAGNLLEFAGIRQEQVNRISSKSPCNFTRVYKGMTQPTFNHNGSMIFLDLSHNMLSGSIPKEIGSTNYLYILDLGHNRLSGAIPQEVGDLTKLNILDLSSNELEGSIPLSLTGLSSLMEIDLSNNHLNGSIPESAQFETFPASGFANNSGLCGYPLPQCGGDSAANANAQHQRSHRKQASLAGSVAMGLLFSLFCIFGLIIVVIEMRKRRKKKDSTLDSYIESHSQSGTTTTVNWKNTCVREALSINLATFEKPLRKLTFADLLDATNGFHNDSLIGSGGFGDVYKAQLKDGSIVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKFGSLEDVLHDQKKGGIKLNWAARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVMLELLTGKRPTDSADFGDNNLVGWVKQHAKLDLTDVFDPELLKEDPSLKIELLEHLKVAVACLDDRSWRRPTMIQVMTMFKEIQAGSGMDSQSTIGTDNGGFSVDMVDMSLKEVPEGK 1196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 70266695 70271063 + Tan0016513.1 Tan03g1376 746880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1376 1196 FunFam Brassinosteroid LRR receptor kinase 962 1163 - -
Tan03g1376 1196 Pfam Leucine rich repeat 324 385 IPR001611 GO:0005515(InterPro)
Tan03g1376 1196 Pfam Leucine rich repeat 685 743 IPR001611 GO:0005515(InterPro)
Tan03g1376 1196 Pfam Leucine rich repeat 496 554 IPR001611 GO:0005515(InterPro)
Tan03g1376 1196 SUPERFAMILY RNI-like 272 589 - -
Tan03g1376 1196 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 653 1161 IPR050647 -
Tan03g1376 1196 Pfam Protein kinase domain 886 1155 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1376 1196 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1008 1020 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1376 1196 ProSiteProfiles Protein kinase domain profile. 886 1161 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1376 1196 SUPERFAMILY L domain-like 39 296 - -
Tan03g1376 1196 ProSitePatterns Protein kinases ATP-binding region signature. 892 915 IPR017441 GO:0005524(InterPro)
Tan03g1376 1196 FunFam serine/threonine-protein kinase BRI1-like 2 847 961 - -
Tan03g1376 1196 SUPERFAMILY Protein kinase-like (PK-like) 872 1162 IPR011009 -
Tan03g1376 1196 Gene3D Ribonuclease Inhibitor 44 775 IPR032675 -
Tan03g1376 1196 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 181 421 - -
Tan03g1376 1196 SMART serkin_6 886 1158 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1376 1196 CDD STKc_IRAK 892 1161 - -
Tan03g1376 1196 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 422 602 - -
Tan03g1376 1196 FunFam Serine/threonine-protein kinase BRI1-like 1 599 656 - -
Tan03g1376 1196 Gene3D Transferase(Phosphotransferase) domain 1 962 1163 - -
Tan03g1376 1196 SMART LRR_typ_2 372 395 IPR003591 -
Tan03g1376 1196 SMART LRR_typ_2 542 566 IPR003591 -
Tan03g1376 1196 SMART LRR_typ_2 567 590 IPR003591 -
Tan03g1376 1196 SMART LRR_typ_2 323 347 IPR003591 -
Tan03g1376 1196 SMART LRR_typ_2 396 420 IPR003591 -
Tan03g1376 1196 SMART LRR_typ_2 730 753 IPR003591 -
Tan03g1376 1196 SMART LRR_typ_2 706 729 IPR003591 -
Tan03g1376 1196 SMART LRR_typ_2 494 518 IPR003591 -
Tan03g1376 1196 PRINTS Leucine-rich repeat signature 399 412 - -
Tan03g1376 1196 PRINTS Leucine-rich repeat signature 706 719 - -
Tan03g1376 1196 Pfam Leucine rich repeat N-terminal domain 39 74 IPR013210 -
Tan03g1376 1196 Pfam Leucine Rich Repeat 663 681 IPR001611 GO:0005515(InterPro)
Tan03g1376 1196 Pfam Leucine Rich Repeat 424 446 IPR001611 GO:0005515(InterPro)
Tan03g1376 1196 Pfam Leucine Rich Repeat 399 418 IPR001611 GO:0005515(InterPro)
Tan03g1376 1196 Pfam Leucine Rich Repeat 255 276 IPR001611 GO:0005515(InterPro)
Tan03g1376 1196 Pfam Leucine Rich Repeat 449 470 IPR001611 GO:0005515(InterPro)
Tan03g1376 1196 Pfam Leucine Rich Repeat 231 250 IPR001611 GO:0005515(InterPro)
Tan03g1376 1196 Gene3D Phosphorylase Kinase; domain 1 846 961 - -
Tan03g1376 1196 Gene3D - 597 657 - -
Tan03g1376 1196 Pfam Brassinosteroid receptor island domain 592 656 IPR045381 -
Tan03g1376 1196 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 653 775 - -
Tan03g1376 1196 SUPERFAMILY L domain-like 652 771 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0270 Tan-Chr1:2279391 Tan03g1376 Tan-Chr3:70266695 3.60E-92 dispersed
Tan03g1376 Tan-Chr3:70266695 Tan11g1708 Tan-Chr11:16748592 1.80E-146 dispersed
Tan09g2325 Tan-Chr9:73061596 Tan03g1376 Tan-Chr3:70266695 4.00E-52 dispersed
Tan03g1376 Tan-Chr3:70266695 Tan04g1751 Tan-Chr4:46525028 7.70E-65 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67319 PF00069 Pkinase 4.20E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1376 K13415 - csv:101209118 2113.19