Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1377 ATGGGATCATCGGCATCGGAGGAGATGATAATGGCGAACCAGTTGGCGAGTTTATTGGAAGCGGAACACGCCGCCGCCGCTATTGCCACCACCGATTTCTTTCCTTTCCCTGAAAACAACCACACTTCGTTTCCGATAATTCAACAATCCGGCCAGCTAATTAAACCCTTCTTGATCTCCACCGATATTCCTCCTAATTATTTTCATTATTATTTTCCCCAAAATCAAAATCAAAATCAAAATCAACATCAACAATCCCTTCTCTTCTCTCTGAAGCCCTCTTCTTCCGATGATCTTCTTCACTTCCCGATCTCAACCACCGCCGCCACCACCCATCTCCTTTCTTCTCTTCACAGATCATCTGCTTCTAATCACTGGGATGTGGGGAGAAATGGTGGTGGTGGTGGTGACGGTGACGGTGACGACGATGAAGACCGTAAGCCGCCACGGTTGAGGGTATCGACGACGACGATGAAGAGGATAAAAGGGAGGAAGAAAGTGAGAGAGCCAAGATTCTGCTTCAAAACCATGAGCGATGTAGATGTTCTTGACGATGGTTATAAATGGCGAAAGTACGGCCAAAAAGTTGTTAAGAACACCCTCCATCCCAGGAGTTATTACCGGTGCACACAAGATAATTGTAAGGTGAAGAAGCGAGTAGAAAGATTAGCGGAAGATCCAAGAATGGTGATAACAACGTATGAAGGAAGACACGCTCATTCACCATCACCTGATAATTTAGAAGAGACGATGGGTCAGTTACCATCGAGTCACCACCTAAATAATTTCTTATGGTAG 798 45.36 MGSSASEEMIMANQLASLLEAEHAAAAIATTDFFPFPENNHTSFPIIQQSGQLIKPFLISTDIPPNYFHYYFPQNQNQNQNQHQQSLLFSLKPSSSDDLLHFPISTTAATTHLLSSLHRSSASNHWDVGRNGGGGGDGDGDDDEDRKPPRLRVSTTTMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTQDNCKVKKRVERLAEDPRMVITTYEGRHAHSPSPDNLEETMGQLPSSHHLNNFLW 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 70290920 70293710 - Tan0004139.1 Tan03g1377 746881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1377 265 MobiDBLite consensus disorder prediction 124 154 - -
Tan03g1377 265 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 131 247 IPR044810 GO:0003700(InterPro)
Tan03g1377 265 Pfam WRKY DNA -binding domain 184 240 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan03g1377 265 SUPERFAMILY WRKY DNA-binding domain 175 242 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan03g1377 265 SMART WRKY_cls 183 242 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan03g1377 265 MobiDBLite consensus disorder prediction 136 152 - -
Tan03g1377 265 Gene3D WRKY domain 170 236 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan03g1377 265 ProSiteProfiles WRKY domain profile. 178 243 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan03g1377 265 FunFam WRKY transcription factor 57 169 243 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1377 Tan-Chr3:70290920 Tan07g0087 Tan-Chr7:3097719 3.70E-28 dispersed
Tan10g0014 Tan-Chr10:432088 Tan03g1377 Tan-Chr3:70290920 5.60E-38 transposed
Tan11g0132 Tan-Chr11:1311187 Tan03g1377 Tan-Chr3:70290920 2.50E-27 transposed
Tan03g1377 Tan-Chr3:70290920 Tan07g0951 Tan-Chr7:21089362 4.20E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26968 PF03106 WRKY 1.00E-24 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1377 - - - 0.0