Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan03g1403 | ATGGCGTCTCTCGACCTCGTGGCCATAAATTTCCTGATCTCCTCATTTCCTTTGATTTTGATCCTTTATTGTCTGTTTCTGAAATGGAATCCACATGGTCTTCCTTGGAATTGGCCCATTTTAGGAATGATTCCCACTGTCATCCGCCATCTCCACCGAATCCACGAGCGTATAACCGAAATCCTACAAGAAACTTCCTCCACTTTCTTCTTCAATGGCATTTGGTTCACCACCAATACGGGGTTCTTGATGACCGTCGATCCCGCAAATATTCACCACATTATGAGCACCCACTTCGACAAGTACCCAAAAGGCCCTGAATTCAAATACATTTTCGACGTTCTGGGAGATGGGATTTTCAACTCCGACTCCGATTCATGGAAGAACCAACGCAAAGTTGCTCAGTCTCTGATAGTCCACGAGAAGTTTCTTCAGTTTATGACTCGAGCTGCAAGTGAAAAAGTGGAGAAAGGATTGATACCGGTGCTCGACTTTTTTTGTAAGAAAAATGAAAGTGGTGGTGTGGTAATTATTGATTTGAAAGATTTGTTTTTGAGATTGGCGTTTGATTCTACTTGTATGATGGTTACTGGGTTTGATCTCAATAGTTTGTCTGTTGAGTTCCCTGAAATTCCCTTCTCCAAGGCTATGGATGACGTTCAAGAAGTGCTTTTTCTTCGACATTTGTATCCAAAAATCTACTGGGAGTTGCTCAAGAAGCTTGACATTGGACAAGCCAAGAGGATGAGGAAAGCTTCCGACACCATAGATGAAGTCATTGCCAACTTGTTGGCTCTAAAAAGAGACCGTTTCAAACGAGCTCAAGAGATGAAACATCTACAACAACAAGATGCTGCTGCTGATTTGATCACATGGTATATGATAAACAAACACGAAGAGGTGGACTGCAACGACAAGTTCTTGAGAGACACAGTCTTAAACTTCATGATCGCGGGCCGAGACGCTCTCAGCGTAACTCTGTCATGGCTCTTCTACACCCTCTCGAAAAGCCCCATCGTAGTAGCAAAGATTCGAGAAGAGCTCAAAGGCATAATCCCACAAAACGAAGAACAACAACAAAAAAGAATAATAATATTCGCCCTTGAAGAGCTCAACAACTTGGTTTACTTGCATGGAGCTATATGCGAAACGCTTCGTCTCTATCCTCCCATTGCATTTGAGCACAAATCTCCGGCAGAGGCCGACACGCTTCCGAGCGGCCACCATGTGAAGCCACACACCAAGATCCTCTTCTCGTTATACGCATTGGGAAGAATGAGGTCTGTTTGGGGCGAGGATTGCCAAGAATTCAAACCAGAGAGATGGATTTCGGAGAAAGGGACGATCAAAAGAGAGCCTTCTTATAAATTCTTCAGCTTCAATGCAGGGCCAAGGACTTGTTTGGGAAAAGGAGTGGCTTTTTCCCAGTTGAAGATTGTTTCAGCTGCCATTATCCATAACTACAACATTGAAGCTGTTGAAGATAACAACGTTATTGCTCCAGCTCCTTCTGTCATACTCCACATGAAGACTGGGTTTAAGGTTCGGGTTTCTAAGAGATGGTCATGA | 1569 | 43.66 | MASLDLVAINFLISSFPLILILYCLFLKWNPHGLPWNWPILGMIPTVIRHLHRIHERITEILQETSSTFFFNGIWFTTNTGFLMTVDPANIHHIMSTHFDKYPKGPEFKYIFDVLGDGIFNSDSDSWKNQRKVAQSLIVHEKFLQFMTRAASEKVEKGLIPVLDFFCKKNESGGVVIIDLKDLFLRLAFDSTCMMVTGFDLNSLSVEFPEIPFSKAMDDVQEVLFLRHLYPKIYWELLKKLDIGQAKRMRKASDTIDEVIANLLALKRDRFKRAQEMKHLQQQDAAADLITWYMINKHEEVDCNDKFLRDTVLNFMIAGRDALSVTLSWLFYTLSKSPIVVAKIREELKGIIPQNEEQQQKRIIIFALEELNNLVYLHGAICETLRLYPPIAFEHKSPAEADTLPSGHHVKPHTKILFSLYALGRMRSVWGEDCQEFKPERWISEKGTIKREPSYKFFSFNAGPRTCLGKGVAFSQLKIVSAAIIHNYNIEAVEDNNVIAPAPSVILHMKTGFKVRVSKRWS | 522 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 70481530 | 70484804 | + | Tan0020486.1 | Tan03g1403 | 746907 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan03g1403 | 522 | PRINTS | P450 superfamily signature | 458 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1403 | 522 | PRINTS | P450 superfamily signature | 318 | 335 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1403 | 522 | PRINTS | P450 superfamily signature | 467 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1403 | 522 | PRINTS | P450 superfamily signature | 379 | 390 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1403 | 522 | CDD | CYP86A | 69 | 513 | - | - | |
| Tan03g1403 | 522 | PANTHER | CYTOCHROME P450 | 22 | 513 | - | - | |
| Tan03g1403 | 522 | SUPERFAMILY | Cytochrome P450 | 26 | 520 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1403 | 522 | Coils | Coil | 249 | 269 | - | - | |
| Tan03g1403 | 522 | Pfam | Cytochrome P450 | 31 | 504 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1403 | 522 | PRINTS | E-class P450 group I signature | 327 | 353 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1403 | 522 | PRINTS | E-class P450 group I signature | 467 | 490 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1403 | 522 | PRINTS | E-class P450 group I signature | 307 | 324 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1403 | 522 | PRINTS | E-class P450 group I signature | 457 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1403 | 522 | Gene3D | Cytochrome P450 | 28 | 521 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1403 | 522 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 460 | 469 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan03g1403 | Tan-Chr3:70481530 | Tan03g1405 | Tan-Chr3:70525475 | 3.70E-181 | dispersed | |
| Tan03g1403 | Tan-Chr3:70481530 | Tan03g1404 | Tan-Chr3:70494538 | 1.40E-199 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan03g1403 | - | - | - | 0.0 |