Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan03g1406 | ATGGCTTCCATCGACCTTTCAGCCATTCTTTTAGCCTTCATACCCTTCCTTTCCATCATTTTCTTCTCTCGAATTTGGAGGTGTAACTTTAATGGAGTCGTTCCATGGAACTGGCCCATCGTCGGGATGACTCCCACTGTTGTTGGCCAAATCCACCGACCTCATGATCGTATAACTGAAGTCTTACACGAAACTGGCTCCAATTTCTTCTTCAAAGGCGTTTGGTTTTCAGGTCTAGACTTCTTCTTCACAGTTGATCCTTCAAACATACACCACATTTTGAGTGCCAACTTCGAAAGATATCCAAAAGGGTCTGATTTCAAGTATATTTTTGACGCTTTGGGAGATGGGATTTTCAACTCCGACTCTGATTCATGGAAGAATCAACGCAAAACCGCTCATTCCTTGGTCCGCCATGAGAGTTTTCTTCAATTCTTAGAGAAAATTGTGATGAAGAAGGTGAATCAAGGGCTGATTCCAGTGCTTGAAAGTGTTTGTGAAAATGGGTCGGTATTGGATTTGCAAGATTTGTTTCAGAGATTTTCGTTTGATTCCACTTGTATGTTGGTCACCGGCTTCGACCTCCATAGTTTATCTCTCGAATTTCCTCAAGTTCCCTTTTCCAAAGCCATGGATGATGTGGAGGAAGTGATTTTTCTTCGACACTTTTTTCCTAAAAAAATTTGGGAATTACAAAAGAAACTCCAATTTGGTGAAGCCAAGAGGCTGAAACAAGCTTGGGAAATCATAGATCAAACCATCGAAAAATTGCTAGCCTCAAAAAGAGAGAGCTTGAAAAAGCTGAAAGAAGAGCCAGCTGAAGTAGGAGTAGGAGGAGTTGATTTGATCACATCATATATTACAAACAAATTAGAGGATGAAATTAGCAACAACAACGACAAGTTCTTGAGAGACACTATTTTGAATTTCATGATTGCTGGTCGAGACACTCTCAGCTCAGCACTCTCTTGGTTTTTCTTTTGTCTTTCAAAAAATCCAATAGTCGAAGCAAAGATAAGAGAAGAGCTGAGAAAAGGTAAAGATTATGACGAATGGAGGATATTTTCGATTAAAGAGGTAGAAAAATTAGTCTACTTTCATGGAGCTTTATGTGAAGCACTTAGACTTTATCCACCAGTTCCACTTCAACACAAGGTGTCTATACAACATGATGTTCTCCCAAGTGGTCATCACATCAAACCTAAAACAAAGATTTTGTTTTCATTATATGCATTGGGAAGAATGAGTGATGTTTGGGGAAAAGATTGCATGGAGTTCAAGCCAGAGAGATGGATTTCAGAAAAGGGAAGTATCAAACATGTACCATCTTACAAATTCTTGGCCTTCAATGCAGGCCCAAGAACTTGTTTGGGAAAACAAGTGGCTTTTACTCAGTTGAAAATAGTTGCAGCTGCCATTGTTCATAACTACAATGTTACTCAACAAATGGACTACCATGAGGTTGTTCCAAATGCTTCCATTATTCTTCACATGAAGCATGGATTCAAGGTTAGGATTACAAAGAGATGGACTTGA | 1536 | 39.32 | MASIDLSAILLAFIPFLSIIFFSRIWRCNFNGVVPWNWPIVGMTPTVVGQIHRPHDRITEVLHETGSNFFFKGVWFSGLDFFFTVDPSNIHHILSANFERYPKGSDFKYIFDALGDGIFNSDSDSWKNQRKTAHSLVRHESFLQFLEKIVMKKVNQGLIPVLESVCENGSVLDLQDLFQRFSFDSTCMLVTGFDLHSLSLEFPQVPFSKAMDDVEEVIFLRHFFPKKIWELQKKLQFGEAKRLKQAWEIIDQTIEKLLASKRESLKKLKEEPAEVGVGGVDLITSYITNKLEDEISNNNDKFLRDTILNFMIAGRDTLSSALSWFFFCLSKNPIVEAKIREELRKGKDYDEWRIFSIKEVEKLVYFHGALCEALRLYPPVPLQHKVSIQHDVLPSGHHIKPKTKILFSLYALGRMSDVWGKDCMEFKPERWISEKGSIKHVPSYKFLAFNAGPRTCLGKQVAFTQLKIVAAAIVHNYNVTQQMDYHEVVPNASIILHMKHGFKVRITKRWT | 511 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 70542435 | 70544251 | + | Tan0006316.1 | Tan03g1406 | 746910 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan03g1406 | 511 | Pfam | Cytochrome P450 | 36 | 484 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1406 | 511 | PRINTS | E-class P450 group I signature | 456 | 479 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1406 | 511 | PRINTS | E-class P450 group I signature | 302 | 319 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1406 | 511 | PRINTS | E-class P450 group I signature | 322 | 348 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1406 | 511 | PRINTS | E-class P450 group I signature | 446 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1406 | 511 | CDD | CYP86A | 69 | 502 | - | - | |
| Tan03g1406 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 449 | 458 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan03g1406 | 511 | SUPERFAMILY | Cytochrome P450 | 35 | 509 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1406 | 511 | PRINTS | P450 superfamily signature | 313 | 330 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1406 | 511 | PRINTS | P450 superfamily signature | 447 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1406 | 511 | PRINTS | P450 superfamily signature | 456 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1406 | 511 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan03g1406 | 511 | PANTHER | CYTOCHROME P450 | 20 | 502 | - | - | |
| Tan03g1406 | 511 | Gene3D | Cytochrome P450 | 28 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan03g1404 | Tan-Chr3:70494538 | Tan03g1406 | Tan-Chr3:70542435 | 1.80E-159 | dispersed | |
| Tan03g1406 | Tan-Chr3:70542435 | Tan04g2376 | Tan-Chr4:82323720 | 5.60E-97 | dispersed | |
| Tan03g1405 | Tan-Chr3:70525475 | Tan03g1406 | Tan-Chr3:70542435 | 6.80E-233 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan03g1406 | - | - | - | 0.0 |