Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1440 ATGGGAATCGCAAAAGGTCCATTAATTTTGTCCAATAAGCCAACGAATTGTGCCAATTCTTCTATGTCCCACGATTATCATCCTCATCAAGGATTCTTCACCTTCTCTAATGCCTTGGACAAATCCAATTCCCTCCCCCACCAGATCCGCCGTGATAAGCTCCGTCTCGATTCCTTCTCCGACGATCCACTTCCGCCGCCTACGGTGACCGGAATCAATGAACACCACCACCAACAACACCTTCATCATGTCTATGCCGCCTCACCAGGTGGGGGGACCATGTTATCAGACATGTTCAATTTCCCTCCAACTCCCTCCCCCGCCGACGCTGTCACCGCCGTCGAATTCTCCGACAATTTCCGAACTTTACGACCACCCAACTCAGCCGCCGCCATGCAGCTTTTTTTGATGAACCCTCCTCCGCCACCGCCACCACGATCGCCCTCGCCACCCTCTACCTCCTCCACTCTCCACATGCTCCTCCCGAACCCGCCTCAGGGTTTCGAAGGCGGTGGCGTTGGAGATCAGGCCGCTTTCGGCCAATTCGCCGCCGTCGTCGAAAGTCAAGGGTTGTCGCTCTCACTTCACTCGTCCTCCTTACAACACTTGGAGGACGCCGCCACGGTCGCTGCCGCCGCTGCGAAAGCCGATGAATTGCGAATTAGAGAAGGTGGGATTTTGTATAGTTACAACAACAACAATAATCAAGTCCATGGCGGCGGAGGAAGTGGATCAACATCCTCAATTTTGCAATATTCTTTTAGAAATAATTCAGAGATCAATTCTCCTCATAGCTTTCAAACCTCACAAATGAATCCCAACCATCAAGTTCAAGTTGGATTTGGGTCATCTATGGGAGTTGTAAATGTGTTGAGGAATTCAAAATATGTCAAAGCCGCACAAGAACTGCTTGAGGAATTTTGTAGTGTTGGGAGGGTTCAATTGAAGAAAAACAAGTTCAATATTAAACAAAACCCCAATCCTGAAACCGCCGCCGCCGTCGCTGCTGCCGGCTCTTCGTCGTCGTCAAAGGATCAACCACCCTTATCCGCTGCTGATAGAATCGAGCATCAACGAAGGAAGGTCAAACTATTATCCATGCTTGATGAGGTCGAACGTAGATACAACCTGTACCGCGAGCAAATGCAAATGGTGGTGAACTCGTTCGACTTGGTGATGGGGTTTGGGGCAGCAGCGCCATACACGACGCTGACGCAGAAGGCGATGTCGAGGCACTTTCGATGCCTAAAAGACGCGATAACGGAGCAGTTAAAGCAGAGCTACGAGGCATTGGGAGAGAAAGGAGGGAATGGAGGGTCAGGAATAACAAAAGGAGAGACACCAAGGCTGAAGCTTCTGGAGCAGAGCCTGCGGCAGCAAAGGGCTTTCCATCAAATGGGAATGATGGAGCAAGAAGCTTGGAGGCCACAGCGTGGGCTCCCTGAACGATCAGTCAACATTCTTAGAGCTTGGCTCTTCGAGCATTTTCTTCACCCGTACCCGAGCGACGCAGACAAGCTTCTGTTAGCTCGACAGACTGGTTTGTCCAGAAATCAGGTTTCAAATTGGTTTATTAATGCAAGAGTTCGATTGTGGAAACCAATGGTAGAAGAAATGTACCAACTTGAAGGCAAAGTCGAAACAGATAATCATCATCATCATCAAGCCTCAGAAGATGACGACGACACCACAGACAATAAGATCCAAAACAGTGCACAAAATCCAACACATACACAACCCAGCAATATTGCCTCTGCTCCACCGCCGTCCTCCGCTACCACTGCTGATCAGGAAACCGCGCCAGGGTTCGCGGCGGCGCATGATCATCAGTACTCGGAGCTGCATGATGTGTGGCGACATGGAACTGCCGGAGAACATTATGGGACCATGTCTGAGGATGTTACAGCGCCTGACATCAACAACAACAACAATAATAATAATATTAATAATGCCCCAACACTTATAAGGTTTGGGACCACCGGCGACGTCTCACTCACTTTAGGGCTCCGCCACGCCGGAAACATCTCCTCCTCCGCCGATAATCCTTCTTTCTCGCTCAGAGACTTTGGTCACTCTTAG 2079 49.98 MGIAKGPLILSNKPTNCANSSMSHDYHPHQGFFTFSNALDKSNSLPHQIRRDKLRLDSFSDDPLPPPTVTGINEHHHQQHLHHVYAASPGGGTMLSDMFNFPPTPSPADAVTAVEFSDNFRTLRPPNSAAAMQLFLMNPPPPPPPRSPSPPSTSSTLHMLLPNPPQGFEGGGVGDQAAFGQFAAVVESQGLSLSLHSSSLQHLEDAATVAAAAAKADELRIREGGILYSYNNNNNQVHGGGGSGSTSSILQYSFRNNSEINSPHSFQTSQMNPNHQVQVGFGSSMGVVNVLRNSKYVKAAQELLEEFCSVGRVQLKKNKFNIKQNPNPETAAAVAAAGSSSSSKDQPPLSAADRIEHQRRKVKLLSMLDEVERRYNLYREQMQMVVNSFDLVMGFGAAAPYTTLTQKAMSRHFRCLKDAITEQLKQSYEALGEKGGNGGSGITKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKLLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQLEGKVETDNHHHHQASEDDDDTTDNKIQNSAQNPTHTQPSNIASAPPPSSATTADQETAPGFAAAHDHQYSELHDVWRHGTAGEHYGTMSEDVTAPDINNNNNNNNINNAPTLIRFGTTGDVSLTLGLRHAGNISSSADNPSFSLRDFGHS 692
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 70781522 70787791 + Tan0007586.1 Tan03g1440 746944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1440 692 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 204 574 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Tan03g1440 692 MobiDBLite consensus disorder prediction 335 355 - -
Tan03g1440 692 Pfam Associated with HOX 290 421 IPR006563 -
Tan03g1440 692 Pfam Homeobox KN domain 491 530 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Tan03g1440 692 CDD homeodomain 474 535 IPR001356 GO:0003677(InterPro)
Tan03g1440 692 MobiDBLite consensus disorder prediction 134 171 - -
Tan03g1440 692 FunFam BEL1-like homeodomain protein 4 477 539 - -
Tan03g1440 692 MobiDBLite consensus disorder prediction 567 598 - -
Tan03g1440 692 SUPERFAMILY Homeodomain-like 475 542 IPR009057 -
Tan03g1440 692 MobiDBLite consensus disorder prediction 673 692 - -
Tan03g1440 692 Coils Coil 361 388 - -
Tan03g1440 692 MobiDBLite consensus disorder prediction 548 599 - -
Tan03g1440 692 MobiDBLite consensus disorder prediction 136 151 - -
Tan03g1440 692 ProSiteProfiles 'Homeobox' domain profile. 471 534 IPR001356 GO:0003677(InterPro)
Tan03g1440 692 Gene3D - 477 539 - -
Tan03g1440 692 SMART HOX_1 474 538 IPR001356 GO:0003677(InterPro)
Tan03g1440 692 SMART prehox3 285 422 IPR006563 -
Tan03g1440 692 MobiDBLite consensus disorder prediction 548 566 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1440 Tan-Chr3:70781522 Tan07g1091 Tan-Chr7:32115087 5.90E-134 dispersed
Tan03g1440 Tan-Chr3:70781522 Tan03g1441 Tan-Chr3:70781522 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26975 PF07526 POX 1.50E-48 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1440 - - - 0.0