Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1456 ATGACTTTGTACCGAAACTTTTTGGTCGTTATAATCGCTATTTTCTCGGCTTCTTTAACAATCGCCGAGAAGTTAACGTCCTGCGAAACCGGGAATTCGGCTCAATTTGTACCCCATCCGTTTGGATTCTCAAATTCGAGCGCAATCAAATTGAGTTGTAGCAAAAATGGCGAGATTCAAATCGGAAGGTTCCAAGTCCAGAACATTACTGAAAGGAGCATCCTCATCAAACTTCCTGCAGAGTGCAATATCTCTATCAATTCAATTTCAGAACTGTTCGGCAAAAACTACAGGCCCACTCTCCGCAACAGTCTCCTTTTGGATTGTTCCGAACAACCTATTCGATGCGGAGTAATGGCCAATTTCAGCCAGAATCAGCCGAAGAACTGCGGCTTTAAGAGCAATAATTTGAGCTGCTTCACCGAGACCAAACAAAATGGATTTCTGCCCTTTTTAGATAAGTGCCAGTCCCTTTTGTCCTCTGTATTCGTTAATGCTACATCAGAATCGACCTCGCTTTTCGAGCTCGAGATCGGGGTCATTGAATTAGAGTGGTGGCTCTCACCCTTGGATTCCGTACGATGCTCAAAAAATGCCAATCGAACGGACATTACCAACTTGGCGGAGCACCTAGGATTTCGTTGCCAGTGCATAGAAGGGTTTGAAGGAAATGCTTACGACGACGTCGGCGACGGCTGCCGGAAAGTTTCTCACAAGTGCAATCCTTCAACATACATTACTGGCCGATGTGGCGAAAGCAAAGTCGCTGCTCTAATTGCTGGTGTTTTTGTTGGAGCTTTTCTAATGGTTGTCTTGACCCTCATTTGTTATTGCATCCGACGCCGCTCAATGTGTCTGAAAGGTCAGATGAGCGCAAAGCGACTTCTAAGTGAGGCTGCTGGAAATTCCAGTGTTACTTTATATCCCTACAGAGAAATAGAAAGAGCCACTAATGGCTTCTCTGAGAAACAAAGGCTGGGAACTGGAGCCTTTGGTACAGTCTATGCAGGAAGGCTTCATGAGGATGAGTGGGTTGCTGTAAAAAGGATCAAATATAGAGATCACAATAGCATTGATCAGGTCATGAATGAGATAAAACTACTCTCCTCGGTGAGTCACCCAAATCTTGTCCGCTTGCTTGGTTGCTGCATTGAAGAAGGCCAACAGATCCTTGTCTATGAGTTTATGCCCAATGGAACTCTCTCTCAACATCTTCAGAGAGAGCGTGGAAATGGCCTTCCATGGACGACAAGACTCACCATTGCAGCCGAAACTTCTCGTGCAATAGCATACCTCCATTCTGCTGTGCATCCACCAATATATCACAGAGACATCAAATCCAGCAATATACTTCTGGATCATGGCTTCAAATCAAAAGTTGCAGATTTTGGTCTTTCGAGACTTGGTATGACAGAAATATCACACGTCTCAACAGCTCCACAGGGAACCCCGGGCTATGTTGACCCACAATACCATCAAAATTTCTATCTTTCAGATAAAAGTGACGTTTATAGTTTTGGAGTAGTCCTAGTAGAGATCATAACAGCAATGAAAGTGGTTGATTTCACTCGTCCCCAGACTGAAGTAAACTTAGCTGCACTTGCCATTGATAGAATTGGAAGAGGTTCTGTTGATGAACTAATTGATCCTTTCCTCGAGCCACATAGAGATGCTTGGACCCTCTACTCTATTCACAAGGTGGCTGAGCTTGCATTCAGATGCCTTGCCTTTCATAGCGACATGAGGCCTTCGATGACAGAAGTAGCAGAGGAACTGGAATGCATCAGACGCAGCGGGTGGACATCAATGGAGGAGCATTTTTGTGCAGCATCATCAGCAGGATCGGCCTGCTCATCTCCTCGTAGCGTAAGCGATAGATCCATAAGTAGCATTACAATTAAGAAGGCTGGGCTGCTTGCAGGACTGGGGAGCCAGAGATTGATAATCCCACCAGAGAACAATCATCATAAGGACTATCTGCCTCCTGTAGAGGAGGTTATGGATAGTTCCCCAGTTTCCATACAAGATCCTTGGTTAAGTGAACAAAGCTCACCATCAACAAATAGTTTATTGGGTAATGTAGCACGGTGA 2091 44.91 MTLYRNFLVVIIAIFSASLTIAEKLTSCETGNSAQFVPHPFGFSNSSAIKLSCSKNGEIQIGRFQVQNITERSILIKLPAECNISINSISELFGKNYRPTLRNSLLLDCSEQPIRCGVMANFSQNQPKNCGFKSNNLSCFTETKQNGFLPFLDKCQSLLSSVFVNATSESTSLFELEIGVIELEWWLSPLDSVRCSKNANRTDITNLAEHLGFRCQCIEGFEGNAYDDVGDGCRKVSHKCNPSTYITGRCGESKVAALIAGVFVGAFLMVVLTLICYCIRRRSMCLKGQMSAKRLLSEAAGNSSVTLYPYREIERATNGFSEKQRLGTGAFGTVYAGRLHEDEWVAVKRIKYRDHNSIDQVMNEIKLLSSVSHPNLVRLLGCCIEEGQQILVYEFMPNGTLSQHLQRERGNGLPWTTRLTIAAETSRAIAYLHSAVHPPIYHRDIKSSNILLDHGFKSKVADFGLSRLGMTEISHVSTAPQGTPGYVDPQYHQNFYLSDKSDVYSFGVVLVEIITAMKVVDFTRPQTEVNLAALAIDRIGRGSVDELIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPSMTEVAEELECIRRSGWTSMEEHFCAASSAGSACSSPRSVSDRSISSITIKKAGLLAGLGSQRLIIPPENNHHKDYLPPVEEVMDSSPVSIQDPWLSEQSSPSTNSLLGNVAR 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 70892622 70896221 - Tan0000607.1 Tan03g1456 746960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1456 696 FunFam Wall-associated receptor kinase-like 20 396 605 - -
Tan03g1456 696 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 40 634 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Tan03g1456 696 MobiDBLite consensus disorder prediction 671 696 - -
Tan03g1456 696 ProSiteProfiles Protein kinase domain profile. 320 595 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1456 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1456 696 FunFam Wall-associated receptor kinase-like 14 287 395 - -
Tan03g1456 696 Pfam Protein tyrosine and serine/threonine kinase 323 592 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1456 696 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524(InterPro)
Tan03g1456 696 SUPERFAMILY Protein kinase-like (PK-like) 300 593 IPR011009 -
Tan03g1456 696 Gene3D Transferase(Phosphotransferase) domain 1 396 611 - -
Tan03g1456 696 Gene3D Phosphorylase Kinase; domain 1 282 395 - -
Tan03g1456 696 SMART serkin_6 320 595 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1456 696 MobiDBLite consensus disorder prediction 673 696 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1456 Tan-Chr3:70892622 Tan04g1956 Tan-Chr4:68361743 3.20E-79 dispersed
Tan02g1915 Tan-Chr2:87616746 Tan03g1456 Tan-Chr3:70892622 2.30E-170 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67325 PF07714 PK_Tyr_Ser-Thr 7.60E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1456 - - - 0.0