Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1513 ATGCGTTGGTTGCGTAACATCTCCTTTGCCCCTCCTTCCACGGTGAGGATTCCGGGCACTGGCACTGGCACTGCCAACGGTGATGATTCTCCCACCAGAAGGACTGCCTCCAGTGGCTCCGACGATCATAATTATCGGGGAATTGTTTGGCTTTTTGGCGCCTCTAAGTATTCTCGCCATAGGAAGCTTCGGAACCTAAGCGGACGTGAACGCGCCGCTTCTTCTTTGGCTAAATGGCCCGATACTGCGCCCGAGCCGGTCTCCTTGTCGCGATCGCCGAGTACCTCTGAGGACCATGCCGTCCCGTTGCCGCTCCCGGAGGTTTCCCCCGCATATCAGCGTCGTGAAGGGATTTCGAATTCGAATTCTGGAACTGGAGACGGGGATTGCCCTCTTCCGTCGCCCAAGGGTTTGCGTGGCCGAGCCGGGGACGAGCGCGATGTAGATAGAGATAGAATTGCACCTCCTCATAAGATTGGGGGCGGGGTCTACACTAGCGCTCCCATTAAAAGTGTATTTGATTCCCGGGAGAGGCAGAAGAAAGAAGATCAGGTTGAGACAACGTCGTCTAGGAGGGTGAGTCAAGATGCAACAGGATATCCTGAAAGATCTCGGAACAGTTTCTGGATTGATGTTCCCAGTAGGAGTGCTCCTACTAGTCCTTTTGCAAGTCCTACACTCAGTCCCCAAAGAAATAGTTCCAGTAACCTTTCAAATTTCCATTGTGTGGCGGCTCCAGTAGGAAATCAAGGCTGGTCTGCACCTGAGCTGCCAAATTTCCATTATGGGACTCCAGTAGGAAATCATGTCTGGTCTGCACCTGAGTTGCCATCCTCAGCAATGATGCGGGGGGTTCCTCCTGCATTCTTCGATGGCTCCACTTTTAGCTGTGAGAGTTCTCCCATGCACAGCCCAAGAATGCATAGCCCAAGAATGCATAGCCCAAGAATGCATAGCCCAAGAGGTAGAAGTCCCCACCGAGATCCCAGAAGTCCTACAGGAGCTGCATCTCCATTGCACACCAAGTTTTCACTTGAATCACATGCTGCACGTCGTGAAAGTGCTGGTCCTGTCAGTGTCCACCCTTTACCTCTTCCTCCTGGAGTACCAATGCCTTCACCATCAACGCCAATGACTTCACCATCAACCTCAGTGCCTTTACCATCAACCTCAGTGCCTTTACCATCAACCCCAATGCCTTCACCATCCCCAATGCCTTTACCATCAACCCCAATTACACAAGCTAACACTAAAACTGAGGCAATCTCAATGAAGAATCAATGGCAAAAAGGAAAGCTTATTGGCCGGGGCACATTTGGAAGTGTTTATGTAGCAAGCAACAGAGAAAATGGAGCTTTATGTGCAATGAAGGAAGTTGAATTATTTCCCGATGATCCGAAATCGGCTGAATGTATAAAGCAATTAGAACAGGAGATCAAACTTCTGAGCCAGCTAAAGCATCCAAATATTGTCCAGTACTATGGCAGTGATATTGTTGAAGATCGATTATATATATACCTGGAGTATGTTCATCCTGGTTCAATTAATAAATATGTCCGTGAACATTGTGGAGCAATGACAGAATCTGTTGTTCGGAATTTTACTCGTCACATCCTTTCAGGGTTGGCCTACTTGCACAGCACAAAGACTATACACCGGGACATTAAAGGTGCTAATTTGCTTGTAGACTCTTGTGGGGTTGTCAAGCTTGCTGACTTCGGAATGGCTAAACACCTTACAGGACAAGTTGCTGATCTCTCTTTAAAGGGAAGTCCATACTGGATGGCTCCTGAGCTCCTTCTGTCTGTGATGCAGAAAGATAACAACTCTGATCTTGCCCTCGCGGTTGATATTTGGAGCCTTGGTTGCACTATTATAGAAATGTTCACTGGCAAGCCACCTTGGAGCGAGTATGAAGGGGCTGCAGCCATGTTTAAGGTCATGAAAGATACCCCAACAATACCTGAATCATTATCTTATGAAGCCAAAGATTTCTTAAAATGCTGCTTTCAGAGAAATCCTGCAGAGAGGCTGACTGCTGCCATGCTGCTTGAACATCCGTTTATGAAAAACTTGCAGCATCCAGATACTCCATCTTGCTCTCAGGGTGTTGCTGGATCAAATTTGACGGTAAACATAACATAG 2145 47.97 MRWLRNISFAPPSTVRIPGTGTGTANGDDSPTRRTASSGSDDHNYRGIVWLFGASKYSRHRKLRNLSGRERAASSLAKWPDTAPEPVSLSRSPSTSEDHAVPLPLPEVSPAYQRREGISNSNSGTGDGDCPLPSPKGLRGRAGDERDVDRDRIAPPHKIGGGVYTSAPIKSVFDSRERQKKEDQVETTSSRRVSQDATGYPERSRNSFWIDVPSRSAPTSPFASPTLSPQRNSSSNLSNFHCVAAPVGNQGWSAPELPNFHYGTPVGNHVWSAPELPSSAMMRGVPPAFFDGSTFSCESSPMHSPRMHSPRMHSPRMHSPRGRSPHRDPRSPTGAASPLHTKFSLESHAARRESAGPVSVHPLPLPPGVPMPSPSTPMTSPSTSVPLPSTSVPLPSTPMPSPSPMPLPSTPITQANTKTEAISMKNQWQKGKLIGRGTFGSVYVASNRENGALCAMKEVELFPDDPKSAECIKQLEQEIKLLSQLKHPNIVQYYGSDIVEDRLYIYLEYVHPGSINKYVREHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSCGVVKLADFGMAKHLTGQVADLSLKGSPYWMAPELLLSVMQKDNNSDLALAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPTIPESLSYEAKDFLKCCFQRNPAERLTAAMLLEHPFMKNLQHPDTPSCSQGVAGSNLTVNIT 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 71414674 71421090 + Tan0005107.4 Tan03g1513 747017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1513 714 MobiDBLite consensus disorder prediction 209 235 - -
Tan03g1513 714 ProSiteProfiles Protein kinase domain profile. 428 689 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1513 714 MobiDBLite consensus disorder prediction 13 34 - -
Tan03g1513 714 Pfam Protein kinase domain 429 689 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1513 714 SUPERFAMILY Protein kinase-like (PK-like) 408 699 IPR011009 -
Tan03g1513 714 MobiDBLite consensus disorder prediction 74 235 - -
Tan03g1513 714 MobiDBLite consensus disorder prediction 1 41 - -
Tan03g1513 714 Gene3D Transferase(Phosphotransferase) domain 1 424 705 - -
Tan03g1513 714 MobiDBLite consensus disorder prediction 360 381 - -
Tan03g1513 714 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 130 695 IPR050538 -
Tan03g1513 714 FunFam Mitogen-activated protein kinase kinase kinase 5 425 713 - -
Tan03g1513 714 MobiDBLite consensus disorder prediction 114 128 - -
Tan03g1513 714 MobiDBLite consensus disorder prediction 139 156 - -
Tan03g1513 714 MobiDBLite consensus disorder prediction 173 189 - -
Tan03g1513 714 ProSitePatterns Protein kinases ATP-binding region signature. 434 457 IPR017441 GO:0005524(InterPro)
Tan03g1513 714 SMART serkin_6 428 689 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1513 714 MobiDBLite consensus disorder prediction 297 404 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1510 Tan-Chr3:71414674 Tan03g1513 Tan-Chr3:71414674 0.00E+00 dispersed
Tan03g1511 Tan-Chr3:71414674 Tan03g1513 Tan-Chr3:71414674 0.00E+00 dispersed
Tan03g1513 Tan-Chr3:71414674 Tan03g1515 Tan-Chr3:71414674 2.40E-287 dispersed
Tan03g1512 Tan-Chr3:71414674 Tan03g1513 Tan-Chr3:71414674 0.00E+00 tandem
Tan03g1513 Tan-Chr3:71414674 Tan03g1514 Tan-Chr3:71414674 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67329 PF00069 Pkinase 2.80E-68 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1513 - - - 0.0