Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1515 ATGCGTTGGTTGCGTAACATCTCCTTTGCCCCTCCTTCCACGGTGAGGATTCCGGGCACTGGCACTGGCACTGCCAACGGTGATGATTCTCCCACCAGAAGGACTGCCTCCAGTGGCTCCGACGATCATAATTATCGGGGAATTGTTTGGCTTTTTGGCGCCTCTAAGTATTCTCGCCATAGGAAGCTTCGGAACCTAAGCGGACGTGAACGCGCCGCTTCTTCTTTGGCTAAATGGCCCGATACTGCGCCCGAGCCGGTCTCCTTGTCGCGATCGCCGAGTACCTCTGAGGACCATGCCGTCCCGTTGCCGCTCCCGGAGGTTTCCCCCGCATATCAGCGTCGTGAAGGGATTTCGAATTCGAATTCTGGAACTGGAGACGGGGATTGCCCTCTTCCGTCGCCCAAGGGTTTGCGTGGCCGAGCCGGGGACGAGCGCGATGTAGATAGAGATAGAATTGCACCTCCTCATAAGATTGGGGGCGGGGTCTACACTAGCGCTCCCATTAAAAGTGTATTTGATTCCCGGGAGAGGCAGAAGAAAGAAGATCAGGTTGAGACAACGTCGTCTAGGAGGGTGAGTCAAGATGCAACAGGATATCCTGAAAGATCTCGGAACAGTTTCTGGATTGATGTTCCCAGTAGGAGTGCTCCTACTAGTCCTTTTGCAAGTCCTACACTCAGTCCCCAAAGAAATAGTTCCAGTAACCTTTCAAATTTCCATTGTGTGGCGGCTCCAGTAGGAAATCAAGGCTGGTCTGCACCTGAGCTGCCAAATTTCCATTATGGGACTCCAGTAGGAAATCATGTCTGGTCTGCACCTGAGTTGCCATCCTCAGCAATGATGCGGGGGGTTCCTCCTGCATTCTTCGATGGCTCCACTTTTAGCTGTGAGAGTTCTCCCATGCACAGCCCAAGAATGCATAGCCCAAGAATGCATAGCCCAAGAATGCATAGCCCAAGAGGTAGAAGTCCCCACCGAGATCCCAGAAGTCCTACAGGAGCTGCATCTCCATTGCACACCAAGTTTTCACTTGAATCACATGCTGCACGTCGTGAAAGTGCTGGTCCTGTCAGTGTCCACCCTTTACCTCTTCCTCCTGGAGTACCAATGCCTTCACCATCAACGCCAATGACTTCACCATCAACCTCAGTGCCTTTACCATCAACCTCAGTGCCTTTACCATCAACCCCAATGCCTTCACCATCCCCAATGCCTTTACCATCAACCCCAATTACACAAGCTAACACTAAAACTGAGGCAATCTCAATGAAGAATCAATGGCAAAAAGGAAAGCTTATTGGCCGGGGCACATTTGGAAGTGTTTATGTAGCAAGCAACAGAGAAAATGGAGCTTTATGTGCAATGAAGGAAGTTGAATTATTTCCCGATGATCCGAAATCGGCTGAATGTATAAAGCAATTAGAACAGGAGATCAAACTTCTGAGCCAGCTAAAGCATCCAAATATTGTCCAGTACTATGGCAGTGATATTGTTGAAGATCGATTATATATATACCTGGAGTATGTTCATCCTGGTTCAATTAATAAATATGTCCGTGAACATTGTGGAGCAATGACAGAATCTGTTGTTCGGAATTTTACTCGTCACATCCTTTCAGGGTTGGCCTACTTGCACAGCACAAAGACTATACACCGGGACATTAAAGGTGCTAATTTGCTTGTAGACTCTTGTGGGGTTGTCAAGCTTGCTGACTTCGGAATGGCTAAACACGTAAGTCTGAGATTGAGTGCCAAGTGCCTTCTACTATTTCCTCCTTTTAGCATCTGTTACCGATCCCCCTTCTTTCTGTCTTTTTGTCCAAGTATATCCATACATTTTAATAAATTAACGGCATTGATCTCTATAGATTTGGTGTCTATTTGA 1887 47.91 MRWLRNISFAPPSTVRIPGTGTGTANGDDSPTRRTASSGSDDHNYRGIVWLFGASKYSRHRKLRNLSGRERAASSLAKWPDTAPEPVSLSRSPSTSEDHAVPLPLPEVSPAYQRREGISNSNSGTGDGDCPLPSPKGLRGRAGDERDVDRDRIAPPHKIGGGVYTSAPIKSVFDSRERQKKEDQVETTSSRRVSQDATGYPERSRNSFWIDVPSRSAPTSPFASPTLSPQRNSSSNLSNFHCVAAPVGNQGWSAPELPNFHYGTPVGNHVWSAPELPSSAMMRGVPPAFFDGSTFSCESSPMHSPRMHSPRMHSPRMHSPRGRSPHRDPRSPTGAASPLHTKFSLESHAARRESAGPVSVHPLPLPPGVPMPSPSTPMTSPSTSVPLPSTSVPLPSTPMPSPSPMPLPSTPITQANTKTEAISMKNQWQKGKLIGRGTFGSVYVASNRENGALCAMKEVELFPDDPKSAECIKQLEQEIKLLSQLKHPNIVQYYGSDIVEDRLYIYLEYVHPGSINKYVREHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSCGVVKLADFGMAKHVSLRLSAKCLLLFPPFSICYRSPFFLSFCPSISIHFNKLTALISIDLVSI 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 71414674 71421090 + Tan0005107.6 Tan03g1515 747019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1515 628 Pfam Protein kinase domain 429 581 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1515 628 MobiDBLite consensus disorder prediction 209 235 - -
Tan03g1515 628 MobiDBLite consensus disorder prediction 13 34 - -
Tan03g1515 628 MobiDBLite consensus disorder prediction 74 235 - -
Tan03g1515 628 MobiDBLite consensus disorder prediction 1 41 - -
Tan03g1515 628 MobiDBLite consensus disorder prediction 360 381 - -
Tan03g1515 628 Gene3D Transferase(Phosphotransferase) domain 1 424 604 - -
Tan03g1515 628 SMART serkin_6 428 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1515 628 MobiDBLite consensus disorder prediction 114 128 - -
Tan03g1515 628 MobiDBLite consensus disorder prediction 139 156 - -
Tan03g1515 628 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 83 582 IPR050538 -
Tan03g1515 628 MobiDBLite consensus disorder prediction 173 189 - -
Tan03g1515 628 ProSitePatterns Protein kinases ATP-binding region signature. 434 457 IPR017441 GO:0005524(InterPro)
Tan03g1515 628 SUPERFAMILY Protein kinase-like (PK-like) 408 601 IPR011009 -
Tan03g1515 628 MobiDBLite consensus disorder prediction 297 404 - -
Tan03g1515 628 ProSiteProfiles Protein kinase domain profile. 428 628 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1513 Tan-Chr3:71414674 Tan03g1515 Tan-Chr3:71414674 2.40E-287 dispersed
Tan03g1515 Tan-Chr3:71414674 Tan07g0368 Tan-Chr7:7326783 4.20E-54 dispersed
Tan03g1514 Tan-Chr3:71414674 Tan03g1515 Tan-Chr3:71414674 2.10E-287 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67331 PF00069 Pkinase 1.40E-40 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1515 - - - 0.0