Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan03g1515 | ATGCGTTGGTTGCGTAACATCTCCTTTGCCCCTCCTTCCACGGTGAGGATTCCGGGCACTGGCACTGGCACTGCCAACGGTGATGATTCTCCCACCAGAAGGACTGCCTCCAGTGGCTCCGACGATCATAATTATCGGGGAATTGTTTGGCTTTTTGGCGCCTCTAAGTATTCTCGCCATAGGAAGCTTCGGAACCTAAGCGGACGTGAACGCGCCGCTTCTTCTTTGGCTAAATGGCCCGATACTGCGCCCGAGCCGGTCTCCTTGTCGCGATCGCCGAGTACCTCTGAGGACCATGCCGTCCCGTTGCCGCTCCCGGAGGTTTCCCCCGCATATCAGCGTCGTGAAGGGATTTCGAATTCGAATTCTGGAACTGGAGACGGGGATTGCCCTCTTCCGTCGCCCAAGGGTTTGCGTGGCCGAGCCGGGGACGAGCGCGATGTAGATAGAGATAGAATTGCACCTCCTCATAAGATTGGGGGCGGGGTCTACACTAGCGCTCCCATTAAAAGTGTATTTGATTCCCGGGAGAGGCAGAAGAAAGAAGATCAGGTTGAGACAACGTCGTCTAGGAGGGTGAGTCAAGATGCAACAGGATATCCTGAAAGATCTCGGAACAGTTTCTGGATTGATGTTCCCAGTAGGAGTGCTCCTACTAGTCCTTTTGCAAGTCCTACACTCAGTCCCCAAAGAAATAGTTCCAGTAACCTTTCAAATTTCCATTGTGTGGCGGCTCCAGTAGGAAATCAAGGCTGGTCTGCACCTGAGCTGCCAAATTTCCATTATGGGACTCCAGTAGGAAATCATGTCTGGTCTGCACCTGAGTTGCCATCCTCAGCAATGATGCGGGGGGTTCCTCCTGCATTCTTCGATGGCTCCACTTTTAGCTGTGAGAGTTCTCCCATGCACAGCCCAAGAATGCATAGCCCAAGAATGCATAGCCCAAGAATGCATAGCCCAAGAGGTAGAAGTCCCCACCGAGATCCCAGAAGTCCTACAGGAGCTGCATCTCCATTGCACACCAAGTTTTCACTTGAATCACATGCTGCACGTCGTGAAAGTGCTGGTCCTGTCAGTGTCCACCCTTTACCTCTTCCTCCTGGAGTACCAATGCCTTCACCATCAACGCCAATGACTTCACCATCAACCTCAGTGCCTTTACCATCAACCTCAGTGCCTTTACCATCAACCCCAATGCCTTCACCATCCCCAATGCCTTTACCATCAACCCCAATTACACAAGCTAACACTAAAACTGAGGCAATCTCAATGAAGAATCAATGGCAAAAAGGAAAGCTTATTGGCCGGGGCACATTTGGAAGTGTTTATGTAGCAAGCAACAGAGAAAATGGAGCTTTATGTGCAATGAAGGAAGTTGAATTATTTCCCGATGATCCGAAATCGGCTGAATGTATAAAGCAATTAGAACAGGAGATCAAACTTCTGAGCCAGCTAAAGCATCCAAATATTGTCCAGTACTATGGCAGTGATATTGTTGAAGATCGATTATATATATACCTGGAGTATGTTCATCCTGGTTCAATTAATAAATATGTCCGTGAACATTGTGGAGCAATGACAGAATCTGTTGTTCGGAATTTTACTCGTCACATCCTTTCAGGGTTGGCCTACTTGCACAGCACAAAGACTATACACCGGGACATTAAAGGTGCTAATTTGCTTGTAGACTCTTGTGGGGTTGTCAAGCTTGCTGACTTCGGAATGGCTAAACACGTAAGTCTGAGATTGAGTGCCAAGTGCCTTCTACTATTTCCTCCTTTTAGCATCTGTTACCGATCCCCCTTCTTTCTGTCTTTTTGTCCAAGTATATCCATACATTTTAATAAATTAACGGCATTGATCTCTATAGATTTGGTGTCTATTTGA | 1887 | 47.91 | MRWLRNISFAPPSTVRIPGTGTGTANGDDSPTRRTASSGSDDHNYRGIVWLFGASKYSRHRKLRNLSGRERAASSLAKWPDTAPEPVSLSRSPSTSEDHAVPLPLPEVSPAYQRREGISNSNSGTGDGDCPLPSPKGLRGRAGDERDVDRDRIAPPHKIGGGVYTSAPIKSVFDSRERQKKEDQVETTSSRRVSQDATGYPERSRNSFWIDVPSRSAPTSPFASPTLSPQRNSSSNLSNFHCVAAPVGNQGWSAPELPNFHYGTPVGNHVWSAPELPSSAMMRGVPPAFFDGSTFSCESSPMHSPRMHSPRMHSPRMHSPRGRSPHRDPRSPTGAASPLHTKFSLESHAARRESAGPVSVHPLPLPPGVPMPSPSTPMTSPSTSVPLPSTSVPLPSTPMPSPSPMPLPSTPITQANTKTEAISMKNQWQKGKLIGRGTFGSVYVASNRENGALCAMKEVELFPDDPKSAECIKQLEQEIKLLSQLKHPNIVQYYGSDIVEDRLYIYLEYVHPGSINKYVREHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSCGVVKLADFGMAKHVSLRLSAKCLLLFPPFSICYRSPFFLSFCPSISIHFNKLTALISIDLVSI | 628 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 71414674 | 71421090 | + | Tan0005107.6 | Tan03g1515 | 747019 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan03g1515 | 628 | Pfam | Protein kinase domain | 429 | 581 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan03g1515 | 628 | MobiDBLite | consensus disorder prediction | 209 | 235 | - | - | |
Tan03g1515 | 628 | MobiDBLite | consensus disorder prediction | 13 | 34 | - | - | |
Tan03g1515 | 628 | MobiDBLite | consensus disorder prediction | 74 | 235 | - | - | |
Tan03g1515 | 628 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Tan03g1515 | 628 | MobiDBLite | consensus disorder prediction | 360 | 381 | - | - | |
Tan03g1515 | 628 | Gene3D | Transferase(Phosphotransferase) domain 1 | 424 | 604 | - | - | |
Tan03g1515 | 628 | SMART | serkin_6 | 428 | 626 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan03g1515 | 628 | MobiDBLite | consensus disorder prediction | 114 | 128 | - | - | |
Tan03g1515 | 628 | MobiDBLite | consensus disorder prediction | 139 | 156 | - | - | |
Tan03g1515 | 628 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 83 | 582 | IPR050538 | - | |
Tan03g1515 | 628 | MobiDBLite | consensus disorder prediction | 173 | 189 | - | - | |
Tan03g1515 | 628 | ProSitePatterns | Protein kinases ATP-binding region signature. | 434 | 457 | IPR017441 | GO:0005524(InterPro) | |
Tan03g1515 | 628 | SUPERFAMILY | Protein kinase-like (PK-like) | 408 | 601 | IPR011009 | - | |
Tan03g1515 | 628 | MobiDBLite | consensus disorder prediction | 297 | 404 | - | - | |
Tan03g1515 | 628 | ProSiteProfiles | Protein kinase domain profile. | 428 | 628 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g1513 | Tan-Chr3:71414674 | Tan03g1515 | Tan-Chr3:71414674 | 2.40E-287 | dispersed | |
Tan03g1515 | Tan-Chr3:71414674 | Tan07g0368 | Tan-Chr7:7326783 | 4.20E-54 | dispersed | |
Tan03g1514 | Tan-Chr3:71414674 | Tan03g1515 | Tan-Chr3:71414674 | 2.10E-287 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67331 | PF00069 | Pkinase | 1.40E-40 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan03g1515 | - | - | - | 0.0 |