Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1516 ATGAAGGATAACTCCTCCTCGAAACTACTTGTTTTCTTGCTTATAAGCTTCTTTTTATTGAATCAGCTCCTTGTGTCCTCACAACTTGATTATAGGTTCTATGATGCCTCTTGTCCCAACCTAACAAGGATTGTCAGATATGGCGTCTGGATGGCAGTTTCTAATGATACTAGAATGGCTGCTTCTCTCTTACGGCTTCATTTTCATGACTGCTTTGCCAACGGGTGTGATGGATCATTGTTGCTTGATGACACAAGCACATTTAAGGGGGAGAAAAATGCATTGCCAAATATGAACTCAGTTCGAGGCTATGAGGTCATTGATAATATAAAGGCTGTTTTAGAGAGAGCTTGCCCATCCGTTGTCTCATGTACTGATATAGTAACTCTAGCAGCTAGAGAGGCTGTTTACCTTGCTGGAGGACCATTTTGGGCCATTCCACTTGGTCGCCGAGATGGCACCACAGCAAGCGAGAGTGAAGCCAACAACCTGCCATCACCAGTGGAGCCATTGGACAATATCATGGCAAAGTTCACTTCAAAAGGTCTTGATGCAAAGGATCTTGTTGCCCTCTCAGGTGCACACACTTTCGGATTTGCTCGGTGCATGATGTTCAAACATAGGCTCTTCAACTTTGACGGATCGGGAAATCCCGATCCAGAACTCGACGTGATGCTGCGACAGAACTTACAGAGCATCTGTCCCAATCAAGATGACTCCAACAACAAACTGGCCCCATTGGACGCCTACACGATCAACAGGTTCGACAATGTGTATTACAAGAACTTGGTGAACAAGTTGGGACTTATGCAATCAGACCAAGCTCTCATGAAAGACAATACAACTGCTCCTTTGGTGGTGAGTTACAGCAAGTACCCATATCTGTTCTACAGGGACTTTGGAGCTTCAATGATGAAGCTGGCCAATACTGGAATACTTACAGGCCAAAATGGGGAGATTAGGAAGAACTGCAGGATGGTGAATTAG 987 44.78 MKDNSSSKLLVFLLISFFLLNQLLVSSQLDYRFYDASCPNLTRIVRYGVWMAVSNDTRMAASLLRLHFHDCFANGCDGSLLLDDTSTFKGEKNALPNMNSVRGYEVIDNIKAVLERACPSVVSCTDIVTLAAREAVYLAGGPFWAIPLGRRDGTTASESEANNLPSPVEPLDNIMAKFTSKGLDAKDLVALSGAHTFGFARCMMFKHRLFNFDGSGNPDPELDVMLRQNLQSICPNQDDSNNKLAPLDAYTINRFDNVYYKNLVNKLGLMQSDQALMKDNTTAPLVVSYSKYPYLFYRDFGASMMKLANTGILTGQNGEIRKNCRMVN 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 71426335 71428059 + Tan0004580.1 Tan03g1516 747020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1516 328 ProSiteProfiles Plant heme peroxidase family profile. 28 328 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 FunFam Peroxidase 165 307 - -
Tan03g1516 328 FunFam Peroxidase 32 180 - -
Tan03g1516 328 Gene3D Peroxidase, domain 2 165 307 - -
Tan03g1516 328 CDD secretory_peroxidase 28 327 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan03g1516 328 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601(InterPro)
Tan03g1516 328 Pfam Peroxidase 46 290 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 Gene3D - 32 328 - -
Tan03g1516 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Tan03g1516 328 PANTHER PEROXIDASE 72-RELATED 17 327 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan03g1516 328 SUPERFAMILY Heme-dependent peroxidases 28 328 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1516 Tan-Chr3:71426335 Tan07g0685 Tan-Chr7:10797187 1.90E-90 dispersed
Tan05g0571 Tan-Chr5:4079061 Tan03g1516 Tan-Chr3:71426335 2.40E-67 transposed
Tan06g1549 Tan-Chr6:23736421 Tan03g1516 Tan-Chr3:71426335 4.10E-48 transposed
Tan03g1516 Tan-Chr3:71426335 Tan05g1394 Tan-Chr5:19719827 3.60E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1516 K00430 - csv:101218459 599.356