Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g1545 ATGGAGTGGGTTCGAGGAGATGAGATTGGGCATGGTAGTTTTGCCACGATCAATTTAGCGATGCCTTCGAAGCCTTGCGGTTCTCAGTTTCCTCCATTAATGGCGGTTAAATCATCTGAAGTTGTCTCCTCTGCCTCGCTTAAGAACGAGAAGCAAGTTTTGGATCTTTTGGGTGATTGCCCACAAATTATTCGGTGTTTTGGTCATAGCTGCAGCGTCGAGAAAGGCGAGGAGTTTTATAATTTGTTTCTTGAGTATGCTACTGGTGGGAGTTTAGCCGATAGAATACAGAGCCGCGGTGGTTTCTTGCCGGAATTTGAGGTTCGGCGGTACACGAAGACGATTCTCGAAGGCCTTCGGTATATTCACGGCAAAGGATTTGTTCACTGTGATGTAAAGCCTCGTAATATTCTTGTGTTTGGTGACGGGGATGCTAAGATTGCTGATTTCGGATTGTCGAAGAAGGCGGGAAAAAACAGAGCAGAAACTGGGGAAGAGGGGAGATTTCAATTGAGAGGCTCTCCTCTGTACATGTCGCCGGAATCGGTGAACGATAACGAGTACGAGTCGCCGTGTGACATATGGGCCGTCGGATGCGCGGTGGTGGAGATGTTGACCGGAAAACCCGCGTGGAATTTCCGGCCGGAATCCAGCATCTATTCTCTGTTACTCAAAATTGGGATGGGAGAGGAATTGCCGGAAATCCCTAAAGATCTTTCAGAGGAAGGGAAAGATTTTCTGGGTAAATGCTTGGTGAAGGATTCCACAAAGAGATGGACGGCTGAGATGCTTCTAAATCACCCATTTATGGCAGAATCCGGGAGGTCTGTTCCATTGACGGCCATGGACGAACCATCAACGTCGCCAAGATGCCCTTTCGATTTAGAAGATTGGGCATCGATTTACTCGCAAGAGGTGGACGAGAGATTTGAGGAGGAATCAAATTGTTGGTTGGATTCGTCATGTTCGTGGTCGTGTTCTCCGACGGAGCGGCTGCTTCAGCTAGTGGACAATGGGCCAGTTGACTGGTCCGTCACTGACAGTTGGGTCACCGTCAGATGA 1062 48.68 MEWVRGDEIGHGSFATINLAMPSKPCGSQFPPLMAVKSSEVVSSASLKNEKQVLDLLGDCPQIIRCFGHSCSVEKGEEFYNLFLEYATGGSLADRIQSRGGFLPEFEVRRYTKTILEGLRYIHGKGFVHCDVKPRNILVFGDGDAKIADFGLSKKAGKNRAETGEEGRFQLRGSPLYMSPESVNDNEYESPCDIWAVGCAVVEMLTGKPAWNFRPESSIYSLLLKIGMGEELPEIPKDLSEEGKDFLGKCLVKDSTKRWTAEMLLNHPFMAESGRSVPLTAMDEPSTSPRCPFDLEDWASIYSQEVDERFEEESNCWLDSSCSWSCSPTERLLQLVDNGPVDWSVTDSWVTVR 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 71753463 71755377 + Tan0015126.1 Tan03g1545 747049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g1545 353 SUPERFAMILY Protein kinase-like (PK-like) 3 298 IPR011009 -
Tan03g1545 353 ProSitePatterns Protein kinases ATP-binding region signature. 9 37 IPR017441 GO:0005524(InterPro)
Tan03g1545 353 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Tan03g1545 353 Gene3D Transferase(Phosphotransferase) domain 1 94 307 - -
Tan03g1545 353 Pfam Protein kinase domain 5 270 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1545 353 CDD STKc_MAPKKK 2 269 - -
Tan03g1545 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g1545 353 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 271 IPR052751 GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Tan03g1545 353 ProSiteProfiles Protein kinase domain profile. 3 270 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g1545 353 SMART serkin_6 3 270 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1545 Tan-Chr3:71753463 Tan05g1617 Tan-Chr5:40117315 3.00E-118 dispersed
Tan03g1545 Tan-Chr3:71753463 Tan05g0893 Tan-Chr5:7131630 9.90E-61 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67334 PF00069 Pkinase 4.50E-54 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g1545 - - - 0.0